FFCP PHASE1:Hg19::chr10:105882171..105882189,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=119392|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29574|TSSclassifier=W|UniProt=Q86XK3|association_with_transcript=166bp_to_ENST00000336358_5end|coexpression_cluster_id=C0|description=CAGE_peak_11_at_SFR1_5end|id=chr10:105882171..105882189,+|ontology_enrichment_celltype=CL:0002057!3.75e-39!42;CL:0000860!4.41e-36!45;CL:0002009!1.33e-24!65;CL:0002194!2.36e-23!63;CL:0000576!2.36e-23!63;CL:0000040!2.36e-23!63;CL:0000559!2.36e-23!63;CL:0000557!5.68e-22!71;CL:0002087!1.73e-20!119;CL:0000839!2.14e-20!70;CL:0002031!1.96e-19!124;CL:0000766!2.70e-18!76;CL:0000738!1.96e-17!140;CL:0000037!1.29e-13!172;CL:0000566!1.29e-13!172;CL:0000988!2.20e-13!182;CL:0002032!1.61e-12!165;CL:0000837!1.61e-12!165;CL:0000763!1.40e-11!112;CL:0000049!1.40e-11!112;CL:0000623!4.85e-10!3;CL:0000825!4.85e-10!3|ontology_enrichment_celltype_v019=CL:0000860;7.03e-75;33!CL:0002057;7.03e-75;33!CL:0000473;1.54e-50;39!CL:0000234;1.54e-50;39!CL:0000576;8.08e-32;48!CL:0000766;1.61e-19;69!CL:0002087;1.18e-15;104!CL:0000763;1.40e-13;100|ontology_enrichment_celltype_v019_2=CL:0000860,1.47e-64,42;CL:0002057,1.47e-64,42;CL:0000473,2.29e-56,48;CL:0000234,2.29e-56,48;CL:0002194,6.85e-45,59;CL:0000576,6.85e-45,59;CL:0000040,6.85e-45,59;CL:0000559,6.85e-45,59;CL:0002009,2.08e-43,61;CL:0000839,4.32e-40,66;CL:0000557,1.74e-39,67;CL:0000766,1.05e-36,72;CL:0000763,3.32e-24,108;CL:0000049,3.32e-24,108;CL:0002087,1.13e-22,115;CL:0002031,1.10e-21,120;CL:0000738,5.24e-19,136;CL:0002032,7.09e-16,161;CL:0000837,7.09e-16,161;CL:0000037,3.65e-15,168;CL:0000988,2.49e-14,177|ontology_enrichment_development_v019=CL:0002057;6.53e-44;42!CL:0000049;2.30e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!9.65e-24!86;UBERON:0002371!2.40e-22!80;UBERON:0002390!2.54e-20!102;UBERON:0003061!2.54e-20!102;UBERON:0004765!4.32e-19!101;UBERON:0001434!4.32e-19!101;UBERON:0002193!8.20e-18!112;UBERON:0002405!9.11e-16!115;UBERON:0002204!2.25e-10!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.63e-35,76;UBERON:0001474,3.76e-32,82;UBERON:0004765,3.18e-29,90;UBERON:0002405,2.96e-28,93;UBERON:0002390,9.06e-27,98;UBERON:0003061,9.06e-27,98;UBERON:0001434,3.24e-26,100;UBERON:0002193,3.32e-24,108;UBERON:0002204,2.91e-15,167;UBERON:0003081,2.49e-12,203;UBERON:0000926,1.94e-07,315;UBERON:0004120,1.94e-07,315;UBERON:0006603,1.94e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0.929716147622738,0.411167888021826,0.929119112685311,1.7261543539329,0.512321413058201,1.18241114944293,7.23965929546899,5.16387746867061,5.41705946377367,0,0,0.449446968890169,6.12167784741805,5.45579346029359,9.59005688698562,0,0,0,13.0594157382863,10.2129340444405,15.5705562248894,0.251248665256743,0,0.217188844705117,4.23779651843358,15.0993830754902,28.1651524822387,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.646882724578552,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=119392 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29574 | |||
|TSSclassifier=W | |||
|UniProt=Q86XK3 | |||
|association_with_transcript=166bp_to_ENST00000336358_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_11_at_SFR1_5end | |||
|id=chr10:105882171..105882189,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.75e-39!42;CL:0000860!4.41e-36!45;CL:0002009!1.33e-24!65;CL:0002194!2.36e-23!63;CL:0000576!2.36e-23!63;CL:0000040!2.36e-23!63;CL:0000559!2.36e-23!63;CL:0000557!5.68e-22!71;CL:0002087!1.73e-20!119;CL:0000839!2.14e-20!70;CL:0002031!1.96e-19!124;CL:0000766!2.70e-18!76;CL:0000738!1.96e-17!140;CL:0000037!1.29e-13!172;CL:0000566!1.29e-13!172;CL:0000988!2.20e-13!182;CL:0002032!1.61e-12!165;CL:0000837!1.61e-12!165;CL:0000763!1.40e-11!112;CL:0000049!1.40e-11!112;CL:0000623!4.85e-10!3;CL:0000825!4.85e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.03e-75;33!CL:0002057;7.03e-75;33!CL:0000473;1.54e-50;39!CL:0000234;1.54e-50;39!CL:0000576;8.08e-32;48!CL:0000766;1.61e-19;69!CL:0002087;1.18e-15;104!CL:0000763;1.40e-13;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.47e-64,42;CL:0002057,1.47e-64,42;CL:0000473,2.29e-56,48;CL:0000234,2.29e-56,48;CL:0002194,6.85e-45,59;CL:0000576,6.85e-45,59;CL:0000040,6.85e-45,59;CL:0000559,6.85e-45,59;CL:0002009,2.08e-43,61;CL:0000839,4.32e-40,66;CL:0000557,1.74e-39,67;CL:0000766,1.05e-36,72;CL:0000763,3.32e-24,108;CL:0000049,3.32e-24,108;CL:0002087,1.13e-22,115;CL:0002031,1.10e-21,120;CL:0000738,5.24e-19,136;CL:0002032,7.09e-16,161;CL:0000837,7.09e-16,161;CL:0000037,3.65e-15,168;CL:0000988,2.49e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.53e-44;42!CL:0000049;2.30e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!9.65e-24!86;UBERON:0002371!2.40e-22!80;UBERON:0002390!2.54e-20!102;UBERON:0003061!2.54e-20!102;UBERON:0004765!4.32e-19!101;UBERON:0001434!4.32e-19!101;UBERON:0002193!8.20e-18!112;UBERON:0002405!9.11e-16!115;UBERON:0002204!2.25e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.63e-35,76;UBERON:0001474,3.76e-32,82;UBERON:0004765,3.18e-29,90;UBERON:0002405,2.96e-28,93;UBERON:0002390,9.06e-27,98;UBERON:0003061,9.06e-27,98;UBERON:0001434,3.24e-26,100;UBERON:0002193,3.32e-24,108;UBERON:0002204,2.91e-15,167;UBERON:0003081,2.49e-12,203;UBERON:0000926,1.94e-07,315;UBERON:0004120,1.94e-07,315;UBERON:0006603,1.94e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0.929716147622738,0.411167888021826,0.929119112685311,1.7261543539329,0.512321413058201,1.18241114944293,7.23965929546899,5.16387746867061,5.41705946377367,0,0,0.449446968890169,6.12167784741805,5.45579346029359,9.59005688698562,0,0,0,13.0594157382863,10.2129340444405,15.5705562248894,0.251248665256743,0,0.217188844705117,4.23779651843358,15.0993830754902,28.1651524822387,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.646882724578552,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@SFR1 | |||
}} |
Revision as of 11:35, 10 September 2013
Short description: | p11@SFR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SFR1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 166bp_to_ENST00000336358_5end |
EntrezGene: | SFR1 |
HGNC: | 29574 |
UniProt: | Q86XK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.47e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-64 | 42 |
defensive cell | 2.29e-56 | 48 |
phagocyte | 2.29e-56 | 48 |
monopoietic cell | 6.85e-45 | 59 |
monocyte | 6.85e-45 | 59 |
monoblast | 6.85e-45 | 59 |
promonocyte | 6.85e-45 | 59 |
macrophage dendritic cell progenitor | 2.08e-43 | 61 |
myeloid lineage restricted progenitor cell | 4.32e-40 | 66 |
granulocyte monocyte progenitor cell | 1.74e-39 | 67 |
myeloid leukocyte | 1.05e-36 | 72 |
myeloid cell | 3.32e-24 | 108 |
common myeloid progenitor | 3.32e-24 | 108 |
nongranular leukocyte | 1.13e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.10e-21 | 120 |
leukocyte | 5.24e-19 | 136 |
hematopoietic oligopotent progenitor cell | 7.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.09e-16 | 161 |
hematopoietic stem cell | 3.65e-15 | 168 |
hematopoietic cell | 2.49e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.63e-35 | 76 |
bone element | 3.76e-32 | 82 |
skeletal element | 3.18e-29 | 90 |
immune system | 2.96e-28 | 93 |
hematopoietic system | 9.06e-27 | 98 |
blood island | 9.06e-27 | 98 |
skeletal system | 3.24e-26 | 100 |
hemolymphoid system | 3.32e-24 | 108 |
musculoskeletal system | 2.91e-15 | 167 |
lateral plate mesoderm | 2.49e-12 | 203 |
mesoderm | 1.94e-07 | 315 |
mesoderm-derived structure | 1.94e-07 | 315 |
presumptive mesoderm | 1.94e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.