FFCP PHASE1:Hg19::chr10:106008834..106008840,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C575|description=CAGE_peak_at_chr10:106008834..106008840,+|id=chr10:106008834..106008840,+|ontology_enrichment_celltype=CL:0000860!4.95e-71!45;CL:0002057!1.76e-62!42;CL:0002194!7.83e-51!63;CL:0000576!7.83e-51!63;CL:0000040!7.83e-51!63;CL:0000559!7.83e-51!63;CL:0000766!1.19e-49!76;CL:0002009!4.89e-49!65;CL:0000839!4.69e-48!70;CL:0000557!3.00e-44!71;CL:0000763!1.41e-39!112;CL:0000049!1.41e-39!112;CL:0000738!8.16e-30!140;CL:0000037!1.24e-28!172;CL:0000566!1.24e-28!172;CL:0002087!1.52e-28!119;CL:0000988!5.24e-28!182;CL:0002031!4.18e-27!124;CL:0002032!5.52e-27!165;CL:0000837!5.52e-27!165;CL:0000767!3.60e-11!3;CL:0002150!1.21e-10!3;CL:0000861!1.21e-10!3;CL:0000134!5.99e-10!358;CL:0002320!1.46e-09!365;CL:0000219!1.61e-09!390|ontology_enrichment_celltype_v019=CL:0000860;8.89e-79;33!CL:0002057;8.89e-79;33!CL:0000473;4.05e-56;39!CL:0000234;4.05e-56;39!CL:0000576;8.74e-36;48!CL:0000766;3.59e-23;69!CL:0002087;1.38e-11;104!CL:0000763;3.44e-09;100!CL:0000738;4.12e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,6.21e-69,42;CL:0002057,6.21e-69,42;CL:0000473,4.09e-60,48;CL:0000234,4.09e-60,48;CL:0002194,9.28e-48,59;CL:0000576,9.28e-48,59;CL:0000040,9.28e-48,59;CL:0000559,9.28e-48,59;CL:0002009,3.65e-46,61;CL:0000839,1.36e-42,66;CL:0000557,6.12e-42,67;CL:0000766,5.99e-39,72;CL:0000763,1.71e-25,108;CL:0000049,1.71e-25,108;CL:0002087,7.65e-24,115;CL:0002031,8.83e-23,120;CL:0000738,6.72e-20,136;CL:0002032,1.57e-16,161;CL:0000837,1.57e-16,161;CL:0000037,9.18e-16,168;CL:0000988,7.25e-15,177|ontology_enrichment_development_v019=CL:0002057;1.53e-44;42!CL:0000049;1.30e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.11e-38!80;UBERON:0001474!3.55e-35!86;UBERON:0002390!1.61e-34!102;UBERON:0003061!1.61e-34!102;UBERON:0002193!1.12e-30!112;UBERON:0004765!8.84e-29!101;UBERON:0001434!8.84e-29!101;UBERON:0002405!8.74e-28!115;UBERON:0002204!2.75e-14!167;UBERON:0003081!7.94e-12!216;UBERON:0002384!4.89e-09!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.79e-37,76;UBERON:0001474,4.80e-34,82;UBERON:0004765,6.78e-31,90;UBERON:0002405,7.49e-30,93;UBERON:0002390,2.98e-28,98;UBERON:0003061,2.98e-28,98;UBERON:0001434,1.17e-27,100;UBERON:0002193,1.71e-25,108;UBERON:0002204,7.20e-16,167;UBERON:0003081,1.03e-12,203;UBERON:0000926,1.87e-07,315;UBERON:0004120,1.87e-07,315;UBERON:0006603,1.87e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0,0,0,0.697287110717054,1.23350366406548,1.85823822537062,0.575384784644301,0.512321413058201,1.18241114944293,2.06847408441971,2.5819387343353,5.41705946377367,0.941211697713023,0.272906150057846,0.674170453335254,6.12167784741805,3.53021929783703,5.11469700639233,0,0,0,3.19230162491442,1.70215567407342,1.24564449799115,1.25624332628372,1.0429658368404,0.65156653411535,0.605399502633369,2.57794345191295,2.53169909952708,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,8.41811148721158,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_at_chr10:106008834..106008840,+ | |||
|id=chr10:106008834..106008840,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.95e-71!45;CL:0002057!1.76e-62!42;CL:0002194!7.83e-51!63;CL:0000576!7.83e-51!63;CL:0000040!7.83e-51!63;CL:0000559!7.83e-51!63;CL:0000766!1.19e-49!76;CL:0002009!4.89e-49!65;CL:0000839!4.69e-48!70;CL:0000557!3.00e-44!71;CL:0000763!1.41e-39!112;CL:0000049!1.41e-39!112;CL:0000738!8.16e-30!140;CL:0000037!1.24e-28!172;CL:0000566!1.24e-28!172;CL:0002087!1.52e-28!119;CL:0000988!5.24e-28!182;CL:0002031!4.18e-27!124;CL:0002032!5.52e-27!165;CL:0000837!5.52e-27!165;CL:0000767!3.60e-11!3;CL:0002150!1.21e-10!3;CL:0000861!1.21e-10!3;CL:0000134!5.99e-10!358;CL:0002320!1.46e-09!365;CL:0000219!1.61e-09!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.89e-79;33!CL:0002057;8.89e-79;33!CL:0000473;4.05e-56;39!CL:0000234;4.05e-56;39!CL:0000576;8.74e-36;48!CL:0000766;3.59e-23;69!CL:0002087;1.38e-11;104!CL:0000763;3.44e-09;100!CL:0000738;4.12e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.21e-69,42;CL:0002057,6.21e-69,42;CL:0000473,4.09e-60,48;CL:0000234,4.09e-60,48;CL:0002194,9.28e-48,59;CL:0000576,9.28e-48,59;CL:0000040,9.28e-48,59;CL:0000559,9.28e-48,59;CL:0002009,3.65e-46,61;CL:0000839,1.36e-42,66;CL:0000557,6.12e-42,67;CL:0000766,5.99e-39,72;CL:0000763,1.71e-25,108;CL:0000049,1.71e-25,108;CL:0002087,7.65e-24,115;CL:0002031,8.83e-23,120;CL:0000738,6.72e-20,136;CL:0002032,1.57e-16,161;CL:0000837,1.57e-16,161;CL:0000037,9.18e-16,168;CL:0000988,7.25e-15,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-44;42!CL:0000049;1.30e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.11e-38!80;UBERON:0001474!3.55e-35!86;UBERON:0002390!1.61e-34!102;UBERON:0003061!1.61e-34!102;UBERON:0002193!1.12e-30!112;UBERON:0004765!8.84e-29!101;UBERON:0001434!8.84e-29!101;UBERON:0002405!8.74e-28!115;UBERON:0002204!2.75e-14!167;UBERON:0003081!7.94e-12!216;UBERON:0002384!4.89e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.79e-37,76;UBERON:0001474,4.80e-34,82;UBERON:0004765,6.78e-31,90;UBERON:0002405,7.49e-30,93;UBERON:0002390,2.98e-28,98;UBERON:0003061,2.98e-28,98;UBERON:0001434,1.17e-27,100;UBERON:0002193,1.71e-25,108;UBERON:0002204,7.20e-16,167;UBERON:0003081,1.03e-12,203;UBERON:0000926,1.87e-07,315;UBERON:0004120,1.87e-07,315;UBERON:0006603,1.87e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0,0,0,0.697287110717054,1.23350366406548,1.85823822537062,0.575384784644301,0.512321413058201,1.18241114944293,2.06847408441971,2.5819387343353,5.41705946377367,0.941211697713023,0.272906150057846,0.674170453335254,6.12167784741805,3.53021929783703,5.11469700639233,0,0,0,3.19230162491442,1.70215567407342,1.24564449799115,1.25624332628372,1.0429658368404,0.65156653411535,0.605399502633369,2.57794345191295,2.53169909952708,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,8.41811148721158,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:106008834..106008840,+ | |||
}} |
Revision as of 11:35, 10 September 2013
Short description: | p@chr10:106008834..106008840, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:106008834..106008840, + |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.21e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.21e-69 | 42 |
defensive cell | 4.09e-60 | 48 |
phagocyte | 4.09e-60 | 48 |
monopoietic cell | 9.28e-48 | 59 |
monocyte | 9.28e-48 | 59 |
monoblast | 9.28e-48 | 59 |
promonocyte | 9.28e-48 | 59 |
macrophage dendritic cell progenitor | 3.65e-46 | 61 |
myeloid lineage restricted progenitor cell | 1.36e-42 | 66 |
granulocyte monocyte progenitor cell | 6.12e-42 | 67 |
myeloid leukocyte | 5.99e-39 | 72 |
myeloid cell | 1.71e-25 | 108 |
common myeloid progenitor | 1.71e-25 | 108 |
nongranular leukocyte | 7.65e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 8.83e-23 | 120 |
leukocyte | 6.72e-20 | 136 |
hematopoietic oligopotent progenitor cell | 1.57e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-16 | 161 |
hematopoietic stem cell | 9.18e-16 | 168 |
hematopoietic cell | 7.25e-15 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.79e-37 | 76 |
bone element | 4.80e-34 | 82 |
skeletal element | 6.78e-31 | 90 |
immune system | 7.49e-30 | 93 |
hematopoietic system | 2.98e-28 | 98 |
blood island | 2.98e-28 | 98 |
skeletal system | 1.17e-27 | 100 |
hemolymphoid system | 1.71e-25 | 108 |
musculoskeletal system | 7.20e-16 | 167 |
lateral plate mesoderm | 1.03e-12 | 203 |
mesoderm | 1.87e-07 | 315 |
mesoderm-derived structure | 1.87e-07 | 315 |
presumptive mesoderm | 1.87e-07 | 315 |
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