FFCP PHASE1:Hg19::chr10:106015549..106015582,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:106015549..106015582,-|id=chr10:106015549..106015582,-|ontology_enrichment_celltype=CL:0002057!1.15e-42!42;CL:0000860!6.08e-40!45;CL:0000839!1.23e-31!70;CL:0000766!8.41e-31!76;CL:0000557!1.54e-29!71;CL:0002194!8.71e-29!63;CL:0000576!8.71e-29!63;CL:0000040!8.71e-29!63;CL:0000559!8.71e-29!63;CL:0002009!2.63e-27!65;CL:0000048!1.85e-16!430;CL:0000723!1.35e-15!436;CL:0000763!1.36e-15!112;CL:0000049!1.36e-15!112;CL:0000034!1.75e-15!444;CL:0000738!4.71e-15!140;CL:0000134!1.43e-14!358;CL:0002320!2.13e-14!365;CL:0002031!1.09e-13!124;CL:0002087!2.59e-13!119;CL:0000219!1.28e-12!390;CL:0002371!2.89e-11!591;CL:0000037!8.70e-10!172;CL:0000566!8.70e-10!172;CL:0002393!1.33e-09!9;CL:0002397!1.33e-09!9;CL:0000144!2.39e-09!625;CL:0000988!4.78e-09!182;CL:0002032!7.54e-08!165;CL:0000837!7.54e-08!165|ontology_enrichment_celltype_v019=CL:0000860;3.27e-77;33!CL:0002057;3.27e-77;33!CL:0000576;3.12e-56;48!CL:0000473;4.04e-53;39!CL:0000234;4.04e-53;39!CL:0000766;3.80e-35;69!CL:0002393;2.73e-18;6!CL:0002397;2.73e-18;6!CL:0000763;2.54e-15;100!CL:0002087;7.62e-15;104!CL:0000738;5.32e-10;136!CL:0000767;8.85e-10;3|ontology_enrichment_celltype_v019_2=CL:0000860,6.83e-104,42;CL:0002057,6.83e-104,42;CL:0000473,1.48e-89,48;CL:0000234,1.48e-89,48;CL:0000766,1.07e-71,72;CL:0002194,1.73e-69,59;CL:0000576,1.73e-69,59;CL:0000040,1.73e-69,59;CL:0000559,1.73e-69,59;CL:0000839,7.02e-68,66;CL:0002009,6.71e-67,61;CL:0000557,1.02e-66,67;CL:0000763,3.68e-44,108;CL:0000049,3.68e-44,108;CL:0000738,2.18e-38,136;CL:0002087,1.17e-36,115;CL:0002031,1.62e-34,120;CL:0000037,7.84e-29,168;CL:0002032,2.09e-27,161;CL:0000837,2.09e-27,161;CL:0000988,9.11e-27,177;CL:0002393,3.04e-20,9;CL:0002397,3.04e-20,9;CL:0000134,2.15e-16,354;CL:0002320,8.22e-16,361;CL:0000219,9.17e-14,386;CL:0000048,1.02e-12,427;CL:0000034,1.24e-12,441;CL:0000723,2.39e-12,433;CL:0000767,8.87e-10,3|ontology_enrichment_development_v019=CL:0002057;1.03e-75;42!CL:0000049;2.24e-13;108|ontology_enrichment_disease=DOID:2394!1.48e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.49e-27!80;UBERON:0001474!3.92e-24!86;UBERON:0002193!1.95e-21!112;UBERON:0002405!7.33e-21!115;UBERON:0002390!3.61e-20!102;UBERON:0003061!3.61e-20!102;UBERON:0004765!4.77e-20!101;UBERON:0001434!4.77e-20!101;UBERON:0003081!1.04e-14!216;UBERON:0002384!2.75e-14!375;UBERON:0002204!5.01e-14!167;UBERON:0000926!7.37e-07!448;UBERON:0004120!7.37e-07!448;UBERON:0006603!7.37e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-60,76;UBERON:0001474,1.79e-55,82;UBERON:0002390,9.70e-50,98;UBERON:0003061,9.70e-50,98;UBERON:0004765,1.32e-49,90;UBERON:0002405,1.16e-47,93;UBERON:0002193,4.15e-44,108;UBERON:0001434,1.41e-43,100;UBERON:0003081,9.14e-27,203;UBERON:0002204,1.97e-24,167;UBERON:0000926,5.04e-19,315;UBERON:0004120,5.04e-19,315;UBERON:0006603,5.04e-19,315;UBERON:0002384,5.11e-15,371|phase1_expression=0,0.642301571672949,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,5.90046415273356,2.68680578668049,8.20525453575203,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,25.4837887924664,44.1197784434312,21.4840762008693,0,0,0,4.07115068582781,2.64513160582167,2.18325655069035,19.2916100631718,12.3350366406548,21.060033220867,20.7138522471948,10.5025889676931,16.3172738623124,67.2254077436406,52.9297440538737,63.6504486993406,10.9180556934711,6.82265375144614,6.51698104890745,77.4392247698383,40.7579864386639,38.9995646737415,1.31940520074686,1.19678194572979,1.27867425159808,33.3740624422872,16.4541715160431,23.0444232128363,18.592401228999,12.5155900420848,14.986030284653,10.8971910474006,25.7794345191295,11.7091083353127,2.11255286311942,3.18906449947565,1.25795187305026,1.79725809834392,0.600707571366025,0.64290234678832,0.285012743741249,1.59133341759272,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,1.45990461090791,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0.132957960518865,0.715471872916026,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0,0.417989933073621,0.516833518338658,0,0.66944122552934,0,0,0,0,0,0.0892997282840798,0,0,3.06633274931766,0.949265659568129,0.366403487860815,0,0,0,0,0,2.78059279707759,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.597794722207204,0.117434498643765,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.717558542755448,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0.504867548488229,0,0,0.355009592516614,0.10075209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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:106015549..106015582,- | |||
|id=chr10:106015549..106015582,- | |||
|ontology_enrichment_celltype=CL:0002057!1.15e-42!42;CL:0000860!6.08e-40!45;CL:0000839!1.23e-31!70;CL:0000766!8.41e-31!76;CL:0000557!1.54e-29!71;CL:0002194!8.71e-29!63;CL:0000576!8.71e-29!63;CL:0000040!8.71e-29!63;CL:0000559!8.71e-29!63;CL:0002009!2.63e-27!65;CL:0000048!1.85e-16!430;CL:0000723!1.35e-15!436;CL:0000763!1.36e-15!112;CL:0000049!1.36e-15!112;CL:0000034!1.75e-15!444;CL:0000738!4.71e-15!140;CL:0000134!1.43e-14!358;CL:0002320!2.13e-14!365;CL:0002031!1.09e-13!124;CL:0002087!2.59e-13!119;CL:0000219!1.28e-12!390;CL:0002371!2.89e-11!591;CL:0000037!8.70e-10!172;CL:0000566!8.70e-10!172;CL:0002393!1.33e-09!9;CL:0002397!1.33e-09!9;CL:0000144!2.39e-09!625;CL:0000988!4.78e-09!182;CL:0002032!7.54e-08!165;CL:0000837!7.54e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.27e-77;33!CL:0002057;3.27e-77;33!CL:0000576;3.12e-56;48!CL:0000473;4.04e-53;39!CL:0000234;4.04e-53;39!CL:0000766;3.80e-35;69!CL:0002393;2.73e-18;6!CL:0002397;2.73e-18;6!CL:0000763;2.54e-15;100!CL:0002087;7.62e-15;104!CL:0000738;5.32e-10;136!CL:0000767;8.85e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.83e-104,42;CL:0002057,6.83e-104,42;CL:0000473,1.48e-89,48;CL:0000234,1.48e-89,48;CL:0000766,1.07e-71,72;CL:0002194,1.73e-69,59;CL:0000576,1.73e-69,59;CL:0000040,1.73e-69,59;CL:0000559,1.73e-69,59;CL:0000839,7.02e-68,66;CL:0002009,6.71e-67,61;CL:0000557,1.02e-66,67;CL:0000763,3.68e-44,108;CL:0000049,3.68e-44,108;CL:0000738,2.18e-38,136;CL:0002087,1.17e-36,115;CL:0002031,1.62e-34,120;CL:0000037,7.84e-29,168;CL:0002032,2.09e-27,161;CL:0000837,2.09e-27,161;CL:0000988,9.11e-27,177;CL:0002393,3.04e-20,9;CL:0002397,3.04e-20,9;CL:0000134,2.15e-16,354;CL:0002320,8.22e-16,361;CL:0000219,9.17e-14,386;CL:0000048,1.02e-12,427;CL:0000034,1.24e-12,441;CL:0000723,2.39e-12,433;CL:0000767,8.87e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-75;42!CL:0000049;2.24e-13;108 | |||
|ontology_enrichment_disease=DOID:2394!1.48e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-27!80;UBERON:0001474!3.92e-24!86;UBERON:0002193!1.95e-21!112;UBERON:0002405!7.33e-21!115;UBERON:0002390!3.61e-20!102;UBERON:0003061!3.61e-20!102;UBERON:0004765!4.77e-20!101;UBERON:0001434!4.77e-20!101;UBERON:0003081!1.04e-14!216;UBERON:0002384!2.75e-14!375;UBERON:0002204!5.01e-14!167;UBERON:0000926!7.37e-07!448;UBERON:0004120!7.37e-07!448;UBERON:0006603!7.37e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-60,76;UBERON:0001474,1.79e-55,82;UBERON:0002390,9.70e-50,98;UBERON:0003061,9.70e-50,98;UBERON:0004765,1.32e-49,90;UBERON:0002405,1.16e-47,93;UBERON:0002193,4.15e-44,108;UBERON:0001434,1.41e-43,100;UBERON:0003081,9.14e-27,203;UBERON:0002204,1.97e-24,167;UBERON:0000926,5.04e-19,315;UBERON:0004120,5.04e-19,315;UBERON:0006603,5.04e-19,315;UBERON:0002384,5.11e-15,371 | |||
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| |||
|short_description=p@chr10:106015549..106015582,- | |||
}} |
Revision as of 11:35, 10 September 2013
Short description: | p@chr10:106015549..106015582, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:106015549..106015582, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-60 | 76 |
bone element | 1.79e-55 | 82 |
hematopoietic system | 9.70e-50 | 98 |
blood island | 9.70e-50 | 98 |
skeletal element | 1.32e-49 | 90 |
immune system | 1.16e-47 | 93 |
hemolymphoid system | 4.15e-44 | 108 |
skeletal system | 1.41e-43 | 100 |
lateral plate mesoderm | 9.14e-27 | 203 |
musculoskeletal system | 1.97e-24 | 167 |
mesoderm | 5.04e-19 | 315 |
mesoderm-derived structure | 5.04e-19 | 315 |
presumptive mesoderm | 5.04e-19 | 315 |
connective tissue | 5.11e-15 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.