FFCP PHASE1:Hg19::chr10:114149469..114149480,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:114149469..114149480,+|id=chr10:114149469..114149480,+|ontology_enrichment_celltype=CL:0002057!4.04e-99!42;CL:0000860!5.59e-92!45;CL:0000766!2.97e-68!76;CL:0002009!5.44e-68!65;CL:0002194!3.28e-66!63;CL:0000576!3.28e-66!63;CL:0000040!3.28e-66!63;CL:0000559!3.28e-66!63;CL:0000557!1.25e-61!71;CL:0000839!7.07e-59!70;CL:0000738!9.22e-54!140;CL:0000763!2.55e-46!112;CL:0000049!2.55e-46!112;CL:0002087!3.90e-45!119;CL:0000037!4.85e-42!172;CL:0000566!4.85e-42!172;CL:0000988!3.24e-39!182;CL:0002031!2.02e-38!124;CL:0002032!4.16e-34!165;CL:0000837!4.16e-34!165;CL:0002393!2.23e-15!9;CL:0002397!2.23e-15!9;CL:0000134!3.40e-15!358;CL:0002320!1.03e-14!365;CL:0000219!5.07e-13!390;CL:0000767!1.28e-12!3;CL:0000784!6.93e-12!3;CL:0000842!9.79e-12!3;CL:0000034!3.83e-11!444;CL:0000048!5.40e-11!430;CL:0000723!1.05e-10!436;CL:0000224!6.35e-09!4;CL:0000094!3.66e-08!8;CL:0000063!8.53e-07!578|ontology_enrichment_celltype_v019=CL:0000860;5.12e-88;33!CL:0002057;5.12e-88;33!CL:0000473;1.14e-61;39!CL:0000234;1.14e-61;39!CL:0000576;4.76e-50;48!CL:0000766;9.55e-35;69!CL:0002087;2.41e-15;104!CL:0000763;7.60e-15;100!CL:0002393;3.93e-11;6!CL:0002397;3.93e-11;6!CL:0000767;8.17e-10;3!CL:0000738;3.56e-09;136!CL:0000094;4.96e-08;8|ontology_enrichment_celltype_v019_2=CL:0000860,3.70e-99,42;CL:0002057,3.70e-99,42;CL:0000473,3.04e-86,48;CL:0000234,3.04e-86,48;CL:0000766,7.83e-70,72;CL:0002194,3.75e-68,59;CL:0000576,3.75e-68,59;CL:0000040,3.75e-68,59;CL:0000559,3.75e-68,59;CL:0002009,8.11e-66,61;CL:0000839,1.37e-60,66;CL:0000557,1.23e-59,67;CL:0000763,2.60e-45,108;CL:0000049,2.60e-45,108;CL:0000738,3.93e-35,136;CL:0002087,3.65e-33,115;CL:0002031,1.30e-31,120;CL:0002032,5.23e-29,161;CL:0000837,5.23e-29,161;CL:0000037,1.29e-27,168;CL:0000988,5.48e-26,177;CL:0000134,1.17e-10,354;CL:0002320,2.35e-10,361;CL:0000767,7.81e-10,3;CL:0000219,2.71e-09,386;CL:0000034,1.88e-08,441;CL:0000094,5.02e-08,8;CL:0000048,5.42e-08,427;CL:0000723,8.21e-08,433;CL:0002393,1.46e-07,9;CL:0002397,1.46e-07,9|ontology_enrichment_development_v019=CL:0002057;2.17e-72;42!CL:0000049;1.30e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!7.42e-54!80;UBERON:0001474!1.45e-49!86;UBERON:0002390!1.95e-48!102;UBERON:0003061!1.95e-48!102;UBERON:0002193!2.25e-43!112;UBERON:0004765!4.75e-41!101;UBERON:0001434!4.75e-41!101;UBERON:0002405!4.34e-35!115;UBERON:0002204!1.18e-21!167;UBERON:0003081!2.19e-18!216;UBERON:0002384!4.65e-14!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.65e-52,76;UBERON:0001474,4.41e-48,82;UBERON:0004765,1.78e-43,90;UBERON:0002405,5.99e-42,93;UBERON:0002390,1.30e-39,98;UBERON:0003061,1.30e-39,98;UBERON:0001434,9.69e-39,100;UBERON:0002193,1.41e-35,108;UBERON:0002204,1.60e-21,167;UBERON:0003081,6.33e-17,203;UBERON:0002384,6.05e-10,371;UBERON:0000926,2.75e-09,315;UBERON:0004120,2.75e-09,315;UBERON:0006603,2.75e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.91914699048606,1.23852898652861,0,0,0,0,0,0,7.20194031091441,4.01088894940283,5.20826089718044,0,0,0,0.290796477559129,0.377875943688809,0,3.0215774797739,0.822335776043652,5.57471467611186,3.74000110018796,1.7931249457037,7.09446689665756,14.1345729102014,5.16387746867061,6.77132432971709,1.31769637679823,0.818718450173537,1.34834090667051,17.7528657575123,13.1580901101198,8.95071976118658,0,0.598390972864896,0,9.28669563611469,2.8369261234557,4.35975574296902,3.26623264833766,1.5644487552606,4.12658804939722,5.44859552370032,8.47038562771399,7.27863491114034,0,0.212604299965044,0.628975936525128,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.256686072559497,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:114149469..114149480,+ | |||
|id=chr10:114149469..114149480,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.04e-99!42;CL:0000860!5.59e-92!45;CL:0000766!2.97e-68!76;CL:0002009!5.44e-68!65;CL:0002194!3.28e-66!63;CL:0000576!3.28e-66!63;CL:0000040!3.28e-66!63;CL:0000559!3.28e-66!63;CL:0000557!1.25e-61!71;CL:0000839!7.07e-59!70;CL:0000738!9.22e-54!140;CL:0000763!2.55e-46!112;CL:0000049!2.55e-46!112;CL:0002087!3.90e-45!119;CL:0000037!4.85e-42!172;CL:0000566!4.85e-42!172;CL:0000988!3.24e-39!182;CL:0002031!2.02e-38!124;CL:0002032!4.16e-34!165;CL:0000837!4.16e-34!165;CL:0002393!2.23e-15!9;CL:0002397!2.23e-15!9;CL:0000134!3.40e-15!358;CL:0002320!1.03e-14!365;CL:0000219!5.07e-13!390;CL:0000767!1.28e-12!3;CL:0000784!6.93e-12!3;CL:0000842!9.79e-12!3;CL:0000034!3.83e-11!444;CL:0000048!5.40e-11!430;CL:0000723!1.05e-10!436;CL:0000224!6.35e-09!4;CL:0000094!3.66e-08!8;CL:0000063!8.53e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.12e-88;33!CL:0002057;5.12e-88;33!CL:0000473;1.14e-61;39!CL:0000234;1.14e-61;39!CL:0000576;4.76e-50;48!CL:0000766;9.55e-35;69!CL:0002087;2.41e-15;104!CL:0000763;7.60e-15;100!CL:0002393;3.93e-11;6!CL:0002397;3.93e-11;6!CL:0000767;8.17e-10;3!CL:0000738;3.56e-09;136!CL:0000094;4.96e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.70e-99,42;CL:0002057,3.70e-99,42;CL:0000473,3.04e-86,48;CL:0000234,3.04e-86,48;CL:0000766,7.83e-70,72;CL:0002194,3.75e-68,59;CL:0000576,3.75e-68,59;CL:0000040,3.75e-68,59;CL:0000559,3.75e-68,59;CL:0002009,8.11e-66,61;CL:0000839,1.37e-60,66;CL:0000557,1.23e-59,67;CL:0000763,2.60e-45,108;CL:0000049,2.60e-45,108;CL:0000738,3.93e-35,136;CL:0002087,3.65e-33,115;CL:0002031,1.30e-31,120;CL:0002032,5.23e-29,161;CL:0000837,5.23e-29,161;CL:0000037,1.29e-27,168;CL:0000988,5.48e-26,177;CL:0000134,1.17e-10,354;CL:0002320,2.35e-10,361;CL:0000767,7.81e-10,3;CL:0000219,2.71e-09,386;CL:0000034,1.88e-08,441;CL:0000094,5.02e-08,8;CL:0000048,5.42e-08,427;CL:0000723,8.21e-08,433;CL:0002393,1.46e-07,9;CL:0002397,1.46e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.17e-72;42!CL:0000049;1.30e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.42e-54!80;UBERON:0001474!1.45e-49!86;UBERON:0002390!1.95e-48!102;UBERON:0003061!1.95e-48!102;UBERON:0002193!2.25e-43!112;UBERON:0004765!4.75e-41!101;UBERON:0001434!4.75e-41!101;UBERON:0002405!4.34e-35!115;UBERON:0002204!1.18e-21!167;UBERON:0003081!2.19e-18!216;UBERON:0002384!4.65e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.65e-52,76;UBERON:0001474,4.41e-48,82;UBERON:0004765,1.78e-43,90;UBERON:0002405,5.99e-42,93;UBERON:0002390,1.30e-39,98;UBERON:0003061,1.30e-39,98;UBERON:0001434,9.69e-39,100;UBERON:0002193,1.41e-35,108;UBERON:0002204,1.60e-21,167;UBERON:0003081,6.33e-17,203;UBERON:0002384,6.05e-10,371;UBERON:0000926,2.75e-09,315;UBERON:0004120,2.75e-09,315;UBERON:0006603,2.75e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.91914699048606,1.23852898652861,0,0,0,0,0,0,7.20194031091441,4.01088894940283,5.20826089718044,0,0,0,0.290796477559129,0.377875943688809,0,3.0215774797739,0.822335776043652,5.57471467611186,3.74000110018796,1.7931249457037,7.09446689665756,14.1345729102014,5.16387746867061,6.77132432971709,1.31769637679823,0.818718450173537,1.34834090667051,17.7528657575123,13.1580901101198,8.95071976118658,0,0.598390972864896,0,9.28669563611469,2.8369261234557,4.35975574296902,3.26623264833766,1.5644487552606,4.12658804939722,5.44859552370032,8.47038562771399,7.27863491114034,0,0.212604299965044,0.628975936525128,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.256686072559497,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:114149469..114149480,+ | |||
}} |
Revision as of 11:47, 10 September 2013
Short description: | p@chr10:114149469..114149480, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:114149469..114149480, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.65e-52 | 76 |
bone element | 4.41e-48 | 82 |
skeletal element | 1.78e-43 | 90 |
immune system | 5.99e-42 | 93 |
hematopoietic system | 1.30e-39 | 98 |
blood island | 1.30e-39 | 98 |
skeletal system | 9.69e-39 | 100 |
hemolymphoid system | 1.41e-35 | 108 |
musculoskeletal system | 1.60e-21 | 167 |
lateral plate mesoderm | 6.33e-17 | 203 |
connective tissue | 6.05e-10 | 371 |
mesoderm | 2.75e-09 | 315 |
mesoderm-derived structure | 2.75e-09 | 315 |
presumptive mesoderm | 2.75e-09 | 315 |
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