FFCP PHASE1:Hg19::chr10:116444371..116444382,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3983|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=78|TSSclassifier=N|UniProt=A6NKJ2,F8W8M4,B3KSG3,B3KVH2,O14639|association_with_transcript=31bp_to_ENST00000369252,ENST00000369267,ENST00000533213,NM_001003407,NM_001003408,uc009xyp.2,uc010qsh.1,uc010qsi.1_5end|description=CAGE_peak_19_at_ABLIM1_5end|id=chr10:116444371..116444382,-|ontology_enrichment_celltype=CL:0002139!6.23e-08!24;CL:0002078!6.08e-07!44|ontology_enrichment_celltype_v019=CL:0002541;1.37e-09;3!CL:0000136;8.89e-08;13|ontology_enrichment_celltype_v019_2=CL:0002541,1.40e-09,3;CL:0000136,9.13e-07,15|ontology_enrichment_development_v019=UBERON:0004140;5.39e-08;1!UBERON:0000358;9.74e-08;1!UBERON:0010227;9.74e-08;1!UBERON:0005062;1.92e-07;4!UBERON:0007284;1.92e-07;4!UBERON:0003124;1.97e-07;1!UBERON:0010115;1.97e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.23e-13;2!DOID:178;1.97e-07;1!DOID:326;1.97e-07;1!DOID:3978;1.97e-07;1!DOID:3394;1.97e-07;1!DOID:5844;1.97e-07;1!DOID:1287;3.03e-07;4|ontology_enrichment_disease_v019_2=DOID:114,8.12e-14,2;DOID:178,1.48e-07,1;DOID:326,1.48e-07,1;DOID:3978,1.48e-07,1;DOID:3394,1.48e-07,1;DOID:5844,1.48e-07,1;DOID:1287,2.47e-07,4|ontology_enrichment_uberon=UBERON:0007023!4.08e-39!115;UBERON:0003075!4.70e-11!86;UBERON:0007284!4.70e-11!86;UBERON:0001049!1.14e-10!57;UBERON:0005068!1.14e-10!57;UBERON:0006241!1.14e-10!57;UBERON:0007135!1.14e-10!57;UBERON:0004111!2.69e-10!241;UBERON:0002346!4.06e-10!90;UBERON:0002020!1.39e-09!34;UBERON:0003528!1.39e-09!34;UBERON:0000064!1.78e-09!219;UBERON:0000477!2.49e-09!286;UBERON:0002791!5.23e-09!33;UBERON:0001893!1.32e-08!34;UBERON:0000468!2.57e-08!659;UBERON:0000025!3.10e-08!194;UBERON:0002616!3.28e-08!59;UBERON:0003080!5.91e-08!42;UBERON:0000062!2.20e-07!511;UBERON:0001869!2.86e-07!32;UBERON:0002780!3.53e-07!41;UBERON:0001890!3.53e-07!41;UBERON:0006240!3.53e-07!41;UBERON:0000467!5.27e-07!625;UBERON:0000483!5.31e-07!309;UBERON:0000480!6.09e-07!626;UBERON:0000119!9.17e-07!312|ontology_enrichment_uberon_v019=UBERON:0002081;4.84e-14;2!UBERON:0007100;7.52e-12;25!UBERON:0003978;1.18e-09;3!UBERON:0004151;1.18e-09;3!UBERON:0000946;1.18e-09;3!UBERON:0003124;1.37e-09;3!UBERON:0000920;1.37e-09;3!UBERON:0002134;5.39e-08;1!UBERON:0005208;5.39e-08;1!UBERON:0004145;5.39e-08;1!UBERON:0005946;5.39e-08;1!UBERON:0005965;5.39e-08;1!UBERON:0002078;5.39e-08;1!UBERON:0000996;6.80e-08;1!UBERON:0002079;9.74e-08;1!UBERON:0002146;9.74e-08;1!UBERON:0005623;9.74e-08;1!UBERON:0002363;1.97e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002081,5.52e-14,2;UBERON:0010227,5.52e-14,2;UBERON:0007100,6.36e-11,27;UBERON:0004151,1.29e-09,3;UBERON:0003978,1.34e-09,3;UBERON:0009751,1.34e-09,3;UBERON:0000946,1.34e-09,3;UBERON:0002523,1.34e-09,3;UBERON:0005983,1.34e-09,3;UBERON:0002165,1.34e-09,3;UBERON:0002062,1.34e-09,3;UBERON:0007280,1.34e-09,3;UBERON:0000920,1.40e-09,3;UBERON:0007023,1.77e-09,114;UBERON:0003124,1.08e-08,7;UBERON:0002134,5.58e-08,1;UBERON:0005208,5.58e-08,1;UBERON:0005946,5.58e-08,1;UBERON:0005965,5.58e-08,1;UBERON:0002078,5.58e-08,1;UBERON:0000996,7.26e-08,1;UBERON:0002079,1.07e-07,1;UBERON:0002146,1.15e-07,1;UBERON:0005623,1.15e-07,1;UBERON:0003103,1.30e-07,68;UBERON:0002363,1.91e-07,1;UBERON:0007645,1.91e-07,1;UBERON:0007647,1.91e-07,1;UBERON:0010115,1.91e-07,1|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.71153252537342,0.66944122552934,1.20848795132744,0,0.488124115096339,0.735326160691737,0,0.357198913136319,0.673588117878509,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86261773342101,1.18157981336281,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0.234817388471643,0.866198686566443,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,1.31205858279882,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.84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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=78 | |||
|TSSclassifier=N | |||
|UniProt=A6NKJ2,F8W8M4,B3KSG3,B3KVH2,O14639 | |||
|association_with_transcript=31bp_to_ENST00000369252,ENST00000369267,ENST00000533213,NM_001003407,NM_001003408,uc009xyp.2,uc010qsh.1,uc010qsi.1_5end | |||
|description=CAGE_peak_19_at_ABLIM1_5end | |||
|id=chr10:116444371..116444382,- | |||
|ontology_enrichment_celltype=CL:0002139!6.23e-08!24;CL:0002078!6.08e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.37e-09;3!CL:0000136;8.89e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.40e-09,3;CL:0000136,9.13e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.39e-08;1!UBERON:0000358;9.74e-08;1!UBERON:0010227;9.74e-08;1!UBERON:0005062;1.92e-07;4!UBERON:0007284;1.92e-07;4!UBERON:0003124;1.97e-07;1!UBERON:0010115;1.97e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.23e-13;2!DOID:178;1.97e-07;1!DOID:326;1.97e-07;1!DOID:3978;1.97e-07;1!DOID:3394;1.97e-07;1!DOID:5844;1.97e-07;1!DOID:1287;3.03e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.12e-14,2;DOID:178,1.48e-07,1;DOID:326,1.48e-07,1;DOID:3978,1.48e-07,1;DOID:3394,1.48e-07,1;DOID:5844,1.48e-07,1;DOID:1287,2.47e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-39!115;UBERON:0003075!4.70e-11!86;UBERON:0007284!4.70e-11!86;UBERON:0001049!1.14e-10!57;UBERON:0005068!1.14e-10!57;UBERON:0006241!1.14e-10!57;UBERON:0007135!1.14e-10!57;UBERON:0004111!2.69e-10!241;UBERON:0002346!4.06e-10!90;UBERON:0002020!1.39e-09!34;UBERON:0003528!1.39e-09!34;UBERON:0000064!1.78e-09!219;UBERON:0000477!2.49e-09!286;UBERON:0002791!5.23e-09!33;UBERON:0001893!1.32e-08!34;UBERON:0000468!2.57e-08!659;UBERON:0000025!3.10e-08!194;UBERON:0002616!3.28e-08!59;UBERON:0003080!5.91e-08!42;UBERON:0000062!2.20e-07!511;UBERON:0001869!2.86e-07!32;UBERON:0002780!3.53e-07!41;UBERON:0001890!3.53e-07!41;UBERON:0006240!3.53e-07!41;UBERON:0000467!5.27e-07!625;UBERON:0000483!5.31e-07!309;UBERON:0000480!6.09e-07!626;UBERON:0000119!9.17e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;4.84e-14;2!UBERON:0007100;7.52e-12;25!UBERON:0003978;1.18e-09;3!UBERON:0004151;1.18e-09;3!UBERON:0000946;1.18e-09;3!UBERON:0003124;1.37e-09;3!UBERON:0000920;1.37e-09;3!UBERON:0002134;5.39e-08;1!UBERON:0005208;5.39e-08;1!UBERON:0004145;5.39e-08;1!UBERON:0005946;5.39e-08;1!UBERON:0005965;5.39e-08;1!UBERON:0002078;5.39e-08;1!UBERON:0000996;6.80e-08;1!UBERON:0002079;9.74e-08;1!UBERON:0002146;9.74e-08;1!UBERON:0005623;9.74e-08;1!UBERON:0002363;1.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,5.52e-14,2;UBERON:0010227,5.52e-14,2;UBERON:0007100,6.36e-11,27;UBERON:0004151,1.29e-09,3;UBERON:0003978,1.34e-09,3;UBERON:0009751,1.34e-09,3;UBERON:0000946,1.34e-09,3;UBERON:0002523,1.34e-09,3;UBERON:0005983,1.34e-09,3;UBERON:0002165,1.34e-09,3;UBERON:0002062,1.34e-09,3;UBERON:0007280,1.34e-09,3;UBERON:0000920,1.40e-09,3;UBERON:0007023,1.77e-09,114;UBERON:0003124,1.08e-08,7;UBERON:0002134,5.58e-08,1;UBERON:0005208,5.58e-08,1;UBERON:0005946,5.58e-08,1;UBERON:0005965,5.58e-08,1;UBERON:0002078,5.58e-08,1;UBERON:0000996,7.26e-08,1;UBERON:0002079,1.07e-07,1;UBERON:0002146,1.15e-07,1;UBERON:0005623,1.15e-07,1;UBERON:0003103,1.30e-07,68;UBERON:0002363,1.91e-07,1;UBERON:0007645,1.91e-07,1;UBERON:0007647,1.91e-07,1;UBERON:0010115,1.91e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.71153252537342,0.66944122552934,1.20848795132744,0,0.488124115096339,0.735326160691737,0,0.357198913136319,0.673588117878509,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86261773342101,1.18157981336281,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0.234817388471643,0.866198686566443,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,1.31205858279882,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03239260505091,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0.996239941255349,0.552567831062295,0,0,0,0,0,0,0,1.7755813014648,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0.692552326534174,0,0,0,0,3.19001159731919,0.915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.796118080530053,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0,1.51647791108371,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0.872901148395775,0,0.451961481561065,0,0,0.0633107959558787,0,0.240476460754601,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.558564802544508,2.06244381610515,4.30723814746088,1.59743200399193,3.86303443322914,7.81100101046554,4.70284307407084,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.394028536495991,0.209818352539992,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0,3.81035807563014,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0.961086713109252,1.57204305099666,0,0.992332043623902,0,0,0,0.544017803369474,2.7575888342497,1.53172788381731,1.63936315354902,0,0,0,0.250381861413,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0.781514011233092,0,0,0,0,0,0.826747186004736,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,1.24183318227694,0,0,0,0.0657727735628491,0,0,0.78493092850514,0,0.560544326627578,0,0.215927591218621,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,1.84793052341245,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0.874238242015829,0,0.980593287015622,0,0.392616934229891,0.891139200981258,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0.860037498908708,0.315543124386369,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.985123076837112,0,0,0,0.426467963801962,0,0,0.248298857183432,0,0.381882949668989,0.404234377916439,1.08858373948481,0.342233301085281,0.202056159043763,0.860666464712116,0.99798106963804,0,0.106727345877715,0,0.0898252021065869,2.34640942403454,0.122241444182866,0.406896178315738,3.32878387092756,0.603821380773079,0 | |||
|short_description=p19@ABLIM1 | |||
}} |
Revision as of 11:52, 10 September 2013
Short description: | p19@ABLIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_ABLIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000369252, ENST00000369267, ENST00000533213, NM_001003407, NM_001003408, uc009xyp.2, uc010qsh.1, uc010qsi.1_5end |
EntrezGene: | ABLIM1 |
HGNC: | 78 |
UniProt: | A6NKJ2F8W8M4B3KSG3B3KVH2O14639 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.40e-09 | 3 |
fat cell | 9.13e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 5.52e-14 | 2 |
future cardiac atrium | 5.52e-14 | 2 |
primary circulatory organ | 6.36e-11 | 27 |
cardiac chamber | 1.29e-09 | 3 |
valve | 1.34e-09 | 3 |
cardiac mesenchyme | 1.34e-09 | 3 |
cardial valve | 1.34e-09 | 3 |
tunica intima | 1.34e-09 | 3 |
heart layer | 1.34e-09 | 3 |
endocardium | 1.34e-09 | 3 |
endocardial cushion | 1.34e-09 | 3 |
presumptive endocardium | 1.34e-09 | 3 |
egg chorion | 1.40e-09 | 3 |
adult organism | 1.77e-09 | 114 |
chorion | 1.08e-08 | 7 |
tricuspid valve | 5.58e-08 | 1 |
right atrium valve | 5.58e-08 | 1 |
outflow tract of atrium | 5.58e-08 | 1 |
outflow part of right atrium | 5.58e-08 | 1 |
right cardiac atrium | 5.58e-08 | 1 |
vagina | 7.26e-08 | 1 |
left cardiac atrium | 1.07e-07 | 1 |
pulmonary valve | 1.15e-07 | 1 |
semi-lunar valve | 1.15e-07 | 1 |
compound organ | 1.30e-07 | 68 |
dura mater | 1.91e-07 | 1 |
future meninx | 1.91e-07 | 1 |
ectomeninx | 1.91e-07 | 1 |
future dura mater | 1.91e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.12e-14 | 2 |
vascular disease | 1.48e-07 | 1 |
ischemia | 1.48e-07 | 1 |
extrinsic cardiomyopathy | 1.48e-07 | 1 |
myocardial ischemia | 1.48e-07 | 1 |
myocardial infarction | 1.48e-07 | 1 |
cardiovascular system disease | 2.47e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.