FFCP PHASE1:Hg19::chr10:126847337..126847340,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C168|description=CAGE_peak_at_chr10:126847337..126847340,+|id=chr10:126847337..126847340,+|ontology_enrichment_celltype=CL:0000860!4.92e-32!45;CL:0002057!5.34e-32!42;CL:0000557!1.66e-27!71;CL:0000766!4.41e-27!76;CL:0002009!8.41e-24!65;CL:0000839!1.18e-23!70;CL:0002194!1.61e-20!63;CL:0000576!1.61e-20!63;CL:0000040!1.61e-20!63;CL:0000559!1.61e-20!63;CL:0000763!1.09e-18!112;CL:0000049!1.09e-18!112;CL:0000738!1.33e-16!140;CL:0002031!1.38e-13!124;CL:0000037!7.28e-12!172;CL:0000566!7.28e-12!172;CL:0002032!6.36e-11!165;CL:0000837!6.36e-11!165;CL:0002087!8.85e-11!119;CL:0000988!9.72e-11!182;CL:0000134!9.88e-08!358;CL:0002320!2.27e-07!365;CL:0001014!2.50e-07!2;CL:0001016!2.50e-07!2|ontology_enrichment_celltype_v019=CL:0000860;1.46e-21;33!CL:0002057;1.46e-21;33!CL:0000473;5.56e-17;39!CL:0000234;5.56e-17;39!CL:0000576;1.83e-12;48!CL:0000097;7.46e-12;5!CL:0000766;8.91e-12;69!CL:0001014;6.57e-08;2!CL:0000771;6.57e-08;2!CL:0001016;6.57e-08;2!CL:0000763;1.64e-07;100!CL:0000163;5.69e-07;9|ontology_enrichment_celltype_v019_2=CL:0000557,8.54e-27,67;CL:0000766,7.60e-25,72;CL:0000860,1.32e-24,42;CL:0002057,1.32e-24,42;CL:0000839,8.94e-23,66;CL:0000473,2.01e-21,48;CL:0000234,2.01e-21,48;CL:0002009,2.80e-20,61;CL:0000763,3.57e-19,108;CL:0000049,3.57e-19,108;CL:0002194,5.79e-17,59;CL:0000576,5.79e-17,59;CL:0000040,5.79e-17,59;CL:0000559,5.79e-17,59;CL:0000738,5.83e-15,136;CL:0002031,1.76e-14,120;CL:0002032,2.02e-12,161;CL:0000837,2.02e-12,161;CL:0000037,7.64e-12,168;CL:0000097,7.88e-12,5;CL:0002028,7.88e-12,5;CL:0000988,3.63e-11,177;CL:0002087,2.63e-08,115;CL:0001014,5.37e-08,2;CL:0001016,5.37e-08,2;CL:0000771,6.58e-08,2;CL:0000163,5.86e-07,9;CL:0000134,8.46e-07,354|ontology_enrichment_development_v019=CL:0002057;4.64e-18;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.59e-25!80;UBERON:0001474!5.37e-25!86;UBERON:0002390!2.47e-24!102;UBERON:0003061!2.47e-24!102;UBERON:0002193!7.63e-23!112;UBERON:0004765!1.28e-21!101;UBERON:0001434!1.28e-21!101;UBERON:0002405!3.69e-19!115;UBERON:0003081!4.04e-12!216;UBERON:0002204!9.64e-11!167;UBERON:0002384!7.03e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.62e-23,76;UBERON:0001474,1.01e-21,82;UBERON:0004765,1.06e-19,90;UBERON:0002405,4.98e-19,93;UBERON:0002390,5.32e-18,98;UBERON:0003061,5.32e-18,98;UBERON:0001434,1.28e-17,100;UBERON:0002193,3.17e-16,108;UBERON:0002204,4.98e-10,167;UBERON:0003081,5.40e-08,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0.434021741431704,0,0,0,0,0,0.242584061187816,0.232429036905685,0.822335776043652,0,0.28769239232215,0.256160706529101,0.236482229888585,1.37898272294647,0.645484683583826,2.70852973188684,0,0,0,0.918251677112708,0.320929027076094,1.91801137739712,0,0,0,1.16083695451434,2.26954089876456,1.24564449799115,0.251248665256743,0.521482918420201,0,0.605399502633369,1.47311054395026,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07328115540772,0.432359860250884,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.674921674654501,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0,1.31149052283922,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C168 | |||
|description=CAGE_peak_at_chr10:126847337..126847340,+ | |||
|id=chr10:126847337..126847340,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.92e-32!45;CL:0002057!5.34e-32!42;CL:0000557!1.66e-27!71;CL:0000766!4.41e-27!76;CL:0002009!8.41e-24!65;CL:0000839!1.18e-23!70;CL:0002194!1.61e-20!63;CL:0000576!1.61e-20!63;CL:0000040!1.61e-20!63;CL:0000559!1.61e-20!63;CL:0000763!1.09e-18!112;CL:0000049!1.09e-18!112;CL:0000738!1.33e-16!140;CL:0002031!1.38e-13!124;CL:0000037!7.28e-12!172;CL:0000566!7.28e-12!172;CL:0002032!6.36e-11!165;CL:0000837!6.36e-11!165;CL:0002087!8.85e-11!119;CL:0000988!9.72e-11!182;CL:0000134!9.88e-08!358;CL:0002320!2.27e-07!365;CL:0001014!2.50e-07!2;CL:0001016!2.50e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-21;33!CL:0002057;1.46e-21;33!CL:0000473;5.56e-17;39!CL:0000234;5.56e-17;39!CL:0000576;1.83e-12;48!CL:0000097;7.46e-12;5!CL:0000766;8.91e-12;69!CL:0001014;6.57e-08;2!CL:0000771;6.57e-08;2!CL:0001016;6.57e-08;2!CL:0000763;1.64e-07;100!CL:0000163;5.69e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,8.54e-27,67;CL:0000766,7.60e-25,72;CL:0000860,1.32e-24,42;CL:0002057,1.32e-24,42;CL:0000839,8.94e-23,66;CL:0000473,2.01e-21,48;CL:0000234,2.01e-21,48;CL:0002009,2.80e-20,61;CL:0000763,3.57e-19,108;CL:0000049,3.57e-19,108;CL:0002194,5.79e-17,59;CL:0000576,5.79e-17,59;CL:0000040,5.79e-17,59;CL:0000559,5.79e-17,59;CL:0000738,5.83e-15,136;CL:0002031,1.76e-14,120;CL:0002032,2.02e-12,161;CL:0000837,2.02e-12,161;CL:0000037,7.64e-12,168;CL:0000097,7.88e-12,5;CL:0002028,7.88e-12,5;CL:0000988,3.63e-11,177;CL:0002087,2.63e-08,115;CL:0001014,5.37e-08,2;CL:0001016,5.37e-08,2;CL:0000771,6.58e-08,2;CL:0000163,5.86e-07,9;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.64e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.59e-25!80;UBERON:0001474!5.37e-25!86;UBERON:0002390!2.47e-24!102;UBERON:0003061!2.47e-24!102;UBERON:0002193!7.63e-23!112;UBERON:0004765!1.28e-21!101;UBERON:0001434!1.28e-21!101;UBERON:0002405!3.69e-19!115;UBERON:0003081!4.04e-12!216;UBERON:0002204!9.64e-11!167;UBERON:0002384!7.03e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.62e-23,76;UBERON:0001474,1.01e-21,82;UBERON:0004765,1.06e-19,90;UBERON:0002405,4.98e-19,93;UBERON:0002390,5.32e-18,98;UBERON:0003061,5.32e-18,98;UBERON:0001434,1.28e-17,100;UBERON:0002193,3.17e-16,108;UBERON:0002204,4.98e-10,167;UBERON:0003081,5.40e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0.434021741431704,0,0,0,0,0,0.242584061187816,0.232429036905685,0.822335776043652,0,0.28769239232215,0.256160706529101,0.236482229888585,1.37898272294647,0.645484683583826,2.70852973188684,0,0,0,0.918251677112708,0.320929027076094,1.91801137739712,0,0,0,1.16083695451434,2.26954089876456,1.24564449799115,0.251248665256743,0.521482918420201,0,0.605399502633369,1.47311054395026,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07328115540772,0.432359860250884,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.674921674654501,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0,1.31149052283922,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0.889811221596536,0.457680136793847,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0.404234377916439,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:126847337..126847340,+ | |||
}} |
Revision as of 12:15, 10 September 2013
Short description: | p@chr10:126847337..126847340, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126847337..126847340, + |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 8.54e-27 | 67 |
myeloid leukocyte | 7.60e-25 | 72 |
classical monocyte | 1.32e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-24 | 42 |
myeloid lineage restricted progenitor cell | 8.94e-23 | 66 |
defensive cell | 2.01e-21 | 48 |
phagocyte | 2.01e-21 | 48 |
macrophage dendritic cell progenitor | 2.80e-20 | 61 |
myeloid cell | 3.57e-19 | 108 |
common myeloid progenitor | 3.57e-19 | 108 |
monopoietic cell | 5.79e-17 | 59 |
monocyte | 5.79e-17 | 59 |
monoblast | 5.79e-17 | 59 |
promonocyte | 5.79e-17 | 59 |
leukocyte | 5.83e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.76e-14 | 120 |
hematopoietic oligopotent progenitor cell | 2.02e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.02e-12 | 161 |
hematopoietic stem cell | 7.64e-12 | 168 |
mast cell | 7.88e-12 | 5 |
basophil mast progenitor cell | 7.88e-12 | 5 |
hematopoietic cell | 3.63e-11 | 177 |
nongranular leukocyte | 2.63e-08 | 115 |
CD1a-positive Langerhans cell | 5.37e-08 | 2 |
immature CD1a-positive Langerhans cell | 5.37e-08 | 2 |
eosinophil | 6.58e-08 | 2 |
endocrine cell | 5.86e-07 | 9 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.62e-23 | 76 |
bone element | 1.01e-21 | 82 |
skeletal element | 1.06e-19 | 90 |
immune system | 4.98e-19 | 93 |
hematopoietic system | 5.32e-18 | 98 |
blood island | 5.32e-18 | 98 |
skeletal system | 1.28e-17 | 100 |
hemolymphoid system | 3.17e-16 | 108 |
musculoskeletal system | 4.98e-10 | 167 |
lateral plate mesoderm | 5.40e-08 | 203 |
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