FFCP PHASE1:Hg19::chr10:33246993..33247003,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:33246993..33247003,+|id=chr10:33246993..33247003,+|ontology_enrichment_celltype=CL:0002057!3.68e-14!42;CL:0000012!1.06e-13!682;CL:0000548!1.52e-13!679;CL:0000004!1.52e-13!679;CL:0000255!1.52e-13!679;CL:0000860!6.12e-13!45;CL:0000003!6.61e-09!722;CL:0000063!2.53e-07!578;CL:0002009!3.05e-07!65;CL:0000557!3.83e-07!71|ontology_enrichment_celltype_v019=CL:0000860;2.21e-31;33!CL:0002057;2.21e-31;33!CL:0000473;7.85e-23;39!CL:0000234;7.85e-23;39!CL:0000576;9.00e-17;48!CL:0000766;2.62e-09;69!CL:0000540;2.89e-07;6!CL:0000404;2.89e-07;6|ontology_enrichment_celltype_v019_2=CL:0000860,1.08e-33,42;CL:0002057,1.08e-33,42;CL:0000473,6.57e-29,48;CL:0000234,6.57e-29,48;CL:0002194,3.24e-22,59;CL:0000576,3.24e-22,59;CL:0000040,3.24e-22,59;CL:0000559,3.24e-22,59;CL:0002009,2.36e-21,61;CL:0000839,2.01e-19,66;CL:0000557,4.52e-19,67;CL:0000766,1.86e-17,72;CL:0002087,1.57e-10,115;CL:0000763,3.01e-10,108;CL:0000049,3.01e-10,108;CL:0002031,6.57e-10,120;CL:0000738,3.08e-08,136;CL:0000540,2.90e-07,6;CL:0000031,2.90e-07,6;CL:0000404,2.90e-07,6|ontology_enrichment_development_v019=CL:0002057;5.23e-23;42!CL:0000031;2.89e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001637!5.43e-08!42;UBERON:0003509!5.43e-08!42;UBERON:0004572!5.43e-08!42;UBERON:0004573!5.20e-07!33;UBERON:0004571!5.20e-07!33|ontology_enrichment_uberon_v019=UBERON:0004573;7.38e-07;33!UBERON:0004571;7.38e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.17e-16,82;UBERON:0002371,2.56e-16,76;UBERON:0004765,8.83e-15,90;UBERON:0003081,7.32e-14,203;UBERON:0002204,5.78e-13,167;UBERON:0001434,7.38e-13,100;UBERON:0002405,1.43e-12,93;UBERON:0002390,1.02e-11,98;UBERON:0003061,1.02e-11,98;UBERON:0002193,3.01e-10,108;UBERON:0000926,1.69e-09,315;UBERON:0004120,1.69e-09,315;UBERON:0006603,1.69e-09,315;UBERON:0004573,1.85e-07,33;UBERON:0004571,1.85e-07,33|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,2.53299878168311,0,0,0.737201809504527,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,1.50602959389125,0.369754010166788,0.154934401160603,0,0,1.10799081706375,1.20326668482085,0.434021741431704,0.223915474239924,0,0,0.436194716338694,0.377875943688809,0,0.929716147622738,1.6446715520873,0.619412741790207,1.7261543539329,1.5369642391746,0.709446689665756,5.86067657252252,1.93645405075148,4.06279459783025,0.941211697713023,0.545812300115692,1.12361742222542,5.20342617030534,3.85114832491312,3.19668562899521,0,0,0,1.7412554317715,0.56738522469114,1.24564449799115,5.02497330513487,3.65038042894141,1.95469960234605,1.81619850790011,1.10483290796269,0.949387162322653,0,0,0,0.336985893439485,0,0,0,0,0.365328307529268,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0,0,0.973269740605272,0.283604451492204,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0,1.53316637465883,1.89853131913626,0.183201743930407,0,0,0.872188104285069,0,0,3.97227542439656,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0,0.454072282934794,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.675105328965065,0,0.252433774244115,0.0920498986422993,0,1.42003837006646,0.10075209822764,0.339121184620975,0.386521706326594,0.545492241181669,0,0,0,0.348581828608555,0,0,0.72995471815166,1.56449532329816,0,0,0,0,0.354920400119532,0.337169380156203,0.482022059766964,0.330881918197182,0.217879444092406,0,0.539325232640658,0.196221465125346,0.769494313892781,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.301586917234893,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0.1466765716419,0,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0.686286847621712,0,0,0.106727557803444,0.9093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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:33246993..33247003,+ | |||
|id=chr10:33246993..33247003,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.68e-14!42;CL:0000012!1.06e-13!682;CL:0000548!1.52e-13!679;CL:0000004!1.52e-13!679;CL:0000255!1.52e-13!679;CL:0000860!6.12e-13!45;CL:0000003!6.61e-09!722;CL:0000063!2.53e-07!578;CL:0002009!3.05e-07!65;CL:0000557!3.83e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-31;33!CL:0002057;2.21e-31;33!CL:0000473;7.85e-23;39!CL:0000234;7.85e-23;39!CL:0000576;9.00e-17;48!CL:0000766;2.62e-09;69!CL:0000540;2.89e-07;6!CL:0000404;2.89e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.08e-33,42;CL:0002057,1.08e-33,42;CL:0000473,6.57e-29,48;CL:0000234,6.57e-29,48;CL:0002194,3.24e-22,59;CL:0000576,3.24e-22,59;CL:0000040,3.24e-22,59;CL:0000559,3.24e-22,59;CL:0002009,2.36e-21,61;CL:0000839,2.01e-19,66;CL:0000557,4.52e-19,67;CL:0000766,1.86e-17,72;CL:0002087,1.57e-10,115;CL:0000763,3.01e-10,108;CL:0000049,3.01e-10,108;CL:0002031,6.57e-10,120;CL:0000738,3.08e-08,136;CL:0000540,2.90e-07,6;CL:0000031,2.90e-07,6;CL:0000404,2.90e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.23e-23;42!CL:0000031;2.89e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!5.43e-08!42;UBERON:0003509!5.43e-08!42;UBERON:0004572!5.43e-08!42;UBERON:0004573!5.20e-07!33;UBERON:0004571!5.20e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.38e-07;33!UBERON:0004571;7.38e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.17e-16,82;UBERON:0002371,2.56e-16,76;UBERON:0004765,8.83e-15,90;UBERON:0003081,7.32e-14,203;UBERON:0002204,5.78e-13,167;UBERON:0001434,7.38e-13,100;UBERON:0002405,1.43e-12,93;UBERON:0002390,1.02e-11,98;UBERON:0003061,1.02e-11,98;UBERON:0002193,3.01e-10,108;UBERON:0000926,1.69e-09,315;UBERON:0004120,1.69e-09,315;UBERON:0006603,1.69e-09,315;UBERON:0004573,1.85e-07,33;UBERON:0004571,1.85e-07,33 | |||
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| |||
|short_description=p@chr10:33246993..33247003,+ | |||
}} |
Revision as of 13:13, 10 September 2013
Short description: | p@chr10:33246993..33247003, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:33246993..33247003, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.08e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-33 | 42 |
defensive cell | 6.57e-29 | 48 |
phagocyte | 6.57e-29 | 48 |
monopoietic cell | 3.24e-22 | 59 |
monocyte | 3.24e-22 | 59 |
monoblast | 3.24e-22 | 59 |
promonocyte | 3.24e-22 | 59 |
macrophage dendritic cell progenitor | 2.36e-21 | 61 |
myeloid lineage restricted progenitor cell | 2.01e-19 | 66 |
granulocyte monocyte progenitor cell | 4.52e-19 | 67 |
myeloid leukocyte | 1.86e-17 | 72 |
nongranular leukocyte | 1.57e-10 | 115 |
myeloid cell | 3.01e-10 | 108 |
common myeloid progenitor | 3.01e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 6.57e-10 | 120 |
leukocyte | 3.08e-08 | 136 |
neuron | 2.90e-07 | 6 |
neuroblast | 2.90e-07 | 6 |
electrically signaling cell | 2.90e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.17e-16 | 82 |
bone marrow | 2.56e-16 | 76 |
skeletal element | 8.83e-15 | 90 |
lateral plate mesoderm | 7.32e-14 | 203 |
musculoskeletal system | 5.78e-13 | 167 |
skeletal system | 7.38e-13 | 100 |
immune system | 1.43e-12 | 93 |
hematopoietic system | 1.02e-11 | 98 |
blood island | 1.02e-11 | 98 |
hemolymphoid system | 3.01e-10 | 108 |
mesoderm | 1.69e-09 | 315 |
mesoderm-derived structure | 1.69e-09 | 315 |
presumptive mesoderm | 1.69e-09 | 315 |
systemic artery | 1.85e-07 | 33 |
systemic arterial system | 1.85e-07 | 33 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.