FFCP PHASE1:Hg19::chr10:61557344..61557347,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:61557344..61557347,-|id=chr10:61557344..61557347,-|ontology_enrichment_celltype=CL:0000542!1.12e-10!53;CL:0000051!1.12e-10!53;CL:0000838!1.40e-10!52;CL:0000945!5.64e-07!24;CL:0000826!5.64e-07!24|ontology_enrichment_celltype_v019=CL:0000236;1.65e-16;13!CL:0000623;4.66e-09;3!CL:0000945;1.08e-08;24|ontology_enrichment_celltype_v019_2=CL:0000236,2.32e-15,14;CL:0000623,3.98e-09,3;CL:0000825,3.98e-09,3;CL:0000945,9.90e-09,24;CL:0000826,9.90e-09,24|ontology_enrichment_development_v019=UBERON:0008425;2.06e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.08e-09!57;UBERON:0005068!6.08e-09!57;UBERON:0006241!6.08e-09!57;UBERON:0007135!6.08e-09!57;UBERON:0002780!1.08e-07!41;UBERON:0001890!1.08e-07!41;UBERON:0006240!1.08e-07!41;UBERON:0002616!1.47e-07!59;UBERON:0001017!2.28e-07!82;UBERON:0003080!2.87e-07!42|ontology_enrichment_uberon_v019=UBERON:0003296;1.34e-14;4!UBERON:0010133;1.34e-14;4!UBERON:0000007;1.36e-13;2!UBERON:0005383;4.66e-09;3!UBERON:0005382;4.66e-09;3!UBERON:0001894;1.50e-08;7!UBERON:0002368;6.78e-08;33!UBERON:0007029;2.06e-07;1!UBERON:0001874;2.06e-07;1!UBERON:0000369;5.36e-07;4!UBERON:0002435;5.36e-07;4!UBERON:0000204;5.36e-07;4!UBERON:0002780;6.68e-07;41!UBERON:0001890;6.68e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.19e-14,4;UBERON:0010133,2.19e-14,4;UBERON:0000007,1.18e-13,2;UBERON:0005383,4.15e-09,3;UBERON:0005382,4.15e-09,3;UBERON:0001894,1.97e-08,7;UBERON:0006222,1.97e-08,7;UBERON:0002780,3.45e-08,41;UBERON:0001890,3.45e-08,41;UBERON:0003080,3.45e-08,41;UBERON:0006240,3.45e-08,41;UBERON:0007029,8.54e-08,1;UBERON:0000073,9.75e-08,53;UBERON:0002616,9.75e-08,53;UBERON:0002368,1.00e-07,35;UBERON:0000949,1.42e-07,45;UBERON:0010371,2.72e-07,104;UBERON:0001049,2.96e-07,56;UBERON:0005068,2.96e-07,56;UBERON:0006241,2.96e-07,56;UBERON:0007135,2.96e-07,56;UBERON:0001874,3.40e-07,1;UBERON:0000369,4.92e-07,4;UBERON:0002435,4.92e-07,4;UBERON:0000204,4.92e-07,4;UBERON:0010082,4.92e-07,4;UBERON:0000955,5.61e-07,68;UBERON:0006238,5.61e-07,68|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0.410623275218653,0.125542639594803,0.993374274723366,0.328402357799783,0.629686250509434,0,0.383829398097213,0.154816123316076,0,0,0,0.387336002901508,0.853015394924529,0,0,0.401088894940283,0.217010870715852,0,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.22465726229299,0.300353785683013,0,0.285012743741249,0.39783335439818,0,0,1.09227722252426,0.889509253863555,0.426730222566507,1.20118796110804,1.72425731986345,0.661044872784862,0,1.1384259382189,2.34894875748376,1.52909291250092,0,0,0.790152254325231,0.393419540227666,0.393010762749165,0.616804496998528,0,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0,0,0.512365278902701,0.520237390239513,0.493313713811028,0.552700035571697,0.289803085735052,0.593146252648242,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,0.604820229674197,0.534880391567015,0.579297615531196,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.283604451492204,0.221729397462564,1.05401742831751,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0.476981248610684,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0.488124115096339,0,0,0,0,0.450445921933289,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.662045904066094,0,0,0,0,0,0,0.404132016209064,0.326923806226917,0,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0.505008341862199,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0,0.843881661206331,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0,0,1.82488679537915,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0.492434012174795,0,0,0,0,0,0.179117045405697,0,0,0,0.616339038092582,0,1.00883967391873,0.12624243342638,0.253991577168676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.224170287987055,0.394061520403854,1.50939302401662,1.15508732651774,0.508189248444927,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0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0.533636729388577,0,0,0,0.244482888365733,0,0,0.201273793591026,0.641136984606466|short_description=p@chr10:61557344..61557347,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:61557344..61557347,- | |||
|id=chr10:61557344..61557347,- | |||
|ontology_enrichment_celltype=CL:0000542!1.12e-10!53;CL:0000051!1.12e-10!53;CL:0000838!1.40e-10!52;CL:0000945!5.64e-07!24;CL:0000826!5.64e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.65e-16;13!CL:0000623;4.66e-09;3!CL:0000945;1.08e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.32e-15,14;CL:0000623,3.98e-09,3;CL:0000825,3.98e-09,3;CL:0000945,9.90e-09,24;CL:0000826,9.90e-09,24 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.06e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.08e-09!57;UBERON:0005068!6.08e-09!57;UBERON:0006241!6.08e-09!57;UBERON:0007135!6.08e-09!57;UBERON:0002780!1.08e-07!41;UBERON:0001890!1.08e-07!41;UBERON:0006240!1.08e-07!41;UBERON:0002616!1.47e-07!59;UBERON:0001017!2.28e-07!82;UBERON:0003080!2.87e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.34e-14;4!UBERON:0010133;1.34e-14;4!UBERON:0000007;1.36e-13;2!UBERON:0005383;4.66e-09;3!UBERON:0005382;4.66e-09;3!UBERON:0001894;1.50e-08;7!UBERON:0002368;6.78e-08;33!UBERON:0007029;2.06e-07;1!UBERON:0001874;2.06e-07;1!UBERON:0000369;5.36e-07;4!UBERON:0002435;5.36e-07;4!UBERON:0000204;5.36e-07;4!UBERON:0002780;6.68e-07;41!UBERON:0001890;6.68e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.19e-14,4;UBERON:0010133,2.19e-14,4;UBERON:0000007,1.18e-13,2;UBERON:0005383,4.15e-09,3;UBERON:0005382,4.15e-09,3;UBERON:0001894,1.97e-08,7;UBERON:0006222,1.97e-08,7;UBERON:0002780,3.45e-08,41;UBERON:0001890,3.45e-08,41;UBERON:0003080,3.45e-08,41;UBERON:0006240,3.45e-08,41;UBERON:0007029,8.54e-08,1;UBERON:0000073,9.75e-08,53;UBERON:0002616,9.75e-08,53;UBERON:0002368,1.00e-07,35;UBERON:0000949,1.42e-07,45;UBERON:0010371,2.72e-07,104;UBERON:0001049,2.96e-07,56;UBERON:0005068,2.96e-07,56;UBERON:0006241,2.96e-07,56;UBERON:0007135,2.96e-07,56;UBERON:0001874,3.40e-07,1;UBERON:0000369,4.92e-07,4;UBERON:0002435,4.92e-07,4;UBERON:0000204,4.92e-07,4;UBERON:0010082,4.92e-07,4;UBERON:0000955,5.61e-07,68;UBERON:0006238,5.61e-07,68 | |||
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| |||
|short_description=p@chr10:61557344..61557347,- | |||
}} |
Revision as of 13:47, 10 September 2013
Short description: | p@chr10:61557344..61557347, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:61557344..61557347, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.32e-15 | 14 |
natural killer cell | 3.98e-09 | 3 |
pro-NK cell | 3.98e-09 | 3 |
lymphocyte of B lineage | 9.90e-09 | 24 |
pro-B cell | 9.90e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 2.19e-14 | 4 |
neuroendocrine gland | 2.19e-14 | 4 |
pituitary gland | 1.18e-13 | 2 |
caudate-putamen | 4.15e-09 | 3 |
dorsal striatum | 4.15e-09 | 3 |
diencephalon | 1.97e-08 | 7 |
future diencephalon | 1.97e-08 | 7 |
regional part of forebrain | 3.45e-08 | 41 |
forebrain | 3.45e-08 | 41 |
anterior neural tube | 3.45e-08 | 41 |
future forebrain | 3.45e-08 | 41 |
surface | 8.54e-08 | 1 |
regional part of nervous system | 9.75e-08 | 53 |
regional part of brain | 9.75e-08 | 53 |
endocrine gland | 1.00e-07 | 35 |
endocrine system | 1.42e-07 | 45 |
ecto-epithelium | 2.72e-07 | 104 |
neural tube | 2.96e-07 | 56 |
neural rod | 2.96e-07 | 56 |
future spinal cord | 2.96e-07 | 56 |
neural keel | 2.96e-07 | 56 |
putamen | 3.40e-07 | 1 |
corpus striatum | 4.92e-07 | 4 |
striatum | 4.92e-07 | 4 |
ventral part of telencephalon | 4.92e-07 | 4 |
future corpus striatum | 4.92e-07 | 4 |
brain | 5.61e-07 | 68 |
future brain | 5.61e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.