FFCP PHASE1:Hg19::chr11:35095489..35095495,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr11:35095489..35095495,-|id=chr11:35095489..35095495,-|ontology_enrichment_celltype=CL:0002057!1.90e-118!42;CL:0000860!4.04e-110!45;CL:0002194!1.49e-80!63;CL:0000576!1.49e-80!63;CL:0000040!1.49e-80!63;CL:0000559!1.49e-80!63;CL:0002009!6.51e-78!65;CL:0000839!1.46e-76!70;CL:0000557!2.09e-75!71;CL:0000766!1.57e-74!76;CL:0000763!1.30e-48!112;CL:0000049!1.30e-48!112;CL:0002087!4.38e-48!119;CL:0000738!4.69e-45!140;CL:0002031!3.49e-43!124;CL:0000037!2.05e-35!172;CL:0000566!2.05e-35!172;CL:0000988!4.33e-33!182;CL:0002032!6.56e-33!165;CL:0000837!6.56e-33!165;CL:0000134!2.45e-14!358;CL:0002320!6.40e-14!365;CL:0000219!1.88e-12!390;CL:0000048!1.32e-11!430;CL:0000723!2.42e-11!436;CL:0000034!5.30e-11!444;CL:0000842!2.95e-07!3|ontology_enrichment_celltype_v019=CL:0000860;1.19e-107;33!CL:0002057;1.19e-107;33!CL:0000473;1.88e-74;39!CL:0000234;1.88e-74;39!CL:0000576;4.02e-56;48!CL:0000766;2.22e-36;69!CL:0000763;1.19e-15;100!CL:0002087;1.62e-14;104!CL:0000738;2.66e-12;136|ontology_enrichment_celltype_v019_2=CL:0000860,8.23e-102,42;CL:0002057,8.23e-102,42;CL:0000473,1.22e-88,48;CL:0000234,1.22e-88,48;CL:0002194,2.70e-76,59;CL:0000576,2.70e-76,59;CL:0000040,2.70e-76,59;CL:0000559,2.70e-76,59;CL:0002009,1.02e-73,61;CL:0000839,6.08e-68,66;CL:0000766,2.81e-67,72;CL:0000557,6.87e-67,67;CL:0000763,7.99e-44,108;CL:0000049,7.99e-44,108;CL:0002087,1.16e-37,115;CL:0002031,6.02e-36,120;CL:0000738,4.36e-34,136;CL:0002032,3.15e-28,161;CL:0000837,3.15e-28,161;CL:0000037,6.74e-27,168;CL:0000988,2.44e-25,177;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441|ontology_enrichment_development_v019=CL:0002057;7.49e-75;42!CL:0000049;1.96e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060085;8.16e-09;1!DOID:3165;8.16e-09;1!DOID:0060121;8.16e-09;1!DOID:2438;8.16e-09;1!DOID:4418;8.16e-09;1|ontology_enrichment_disease_v019_2=DOID:0060085,9.17e-09,1;DOID:3165,9.17e-09,1;DOID:0060121,9.17e-09,1;DOID:2438,9.17e-09,1;DOID:4418,9.17e-09,1|ontology_enrichment_uberon=UBERON:0002371!2.79e-66!80;UBERON:0001474!3.03e-61!86;UBERON:0002390!3.17e-57!102;UBERON:0003061!3.17e-57!102;UBERON:0002193!1.50e-51!112;UBERON:0004765!3.04e-51!101;UBERON:0001434!3.04e-51!101;UBERON:0002405!3.08e-44!115;UBERON:0002204!2.13e-30!167;UBERON:0003081!4.15e-25!216;UBERON:0002384!2.37e-13!375;UBERON:0000926!2.37e-08!448;UBERON:0004120!2.37e-08!448;UBERON:0006603!2.37e-08!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.22e-58,76;UBERON:0001474,3.92e-54,82;UBERON:0004765,4.79e-49,90;UBERON:0002405,2.32e-47,93;UBERON:0002390,8.86e-45,98;UBERON:0003061,8.86e-45,98;UBERON:0001434,8.10e-44,100;UBERON:0002193,2.53e-40,108;UBERON:0002204,8.32e-25,167;UBERON:0003081,9.91e-20,203;UBERON:0000926,2.73e-11,315;UBERON:0004120,2.73e-11,315;UBERON:0006603,2.73e-11,315;UBERON:0002384,5.43e-10,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0,0,0,0,0.0774672005803016,0,0,0,0.601633342410425,1.73608696572681,0,0,0,1.01778767145695,0.377875943688809,0.727752183563449,1.85943229524548,2.05583944010913,3.09706370895104,0.575384784644301,3.07392847834921,2.83778675866302,4.13694816883942,9.68227025375739,1.35426486594342,1.50593871634084,2.72906150057846,2.24723484445085,2.75475503133812,1.60464513538047,4.47535988059329,0.329851300186716,0.398927315243264,0.852449501065388,3.48251086354301,1.13477044938228,6.85104473895132,3.26623264833766,1.5644487552606,2.17188844705117,0,5.15588690382591,4.74693581161327,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19228767021794,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:35095489..35095495,- | |||
|id=chr11:35095489..35095495,- | |||
|ontology_enrichment_celltype=CL:0002057!1.90e-118!42;CL:0000860!4.04e-110!45;CL:0002194!1.49e-80!63;CL:0000576!1.49e-80!63;CL:0000040!1.49e-80!63;CL:0000559!1.49e-80!63;CL:0002009!6.51e-78!65;CL:0000839!1.46e-76!70;CL:0000557!2.09e-75!71;CL:0000766!1.57e-74!76;CL:0000763!1.30e-48!112;CL:0000049!1.30e-48!112;CL:0002087!4.38e-48!119;CL:0000738!4.69e-45!140;CL:0002031!3.49e-43!124;CL:0000037!2.05e-35!172;CL:0000566!2.05e-35!172;CL:0000988!4.33e-33!182;CL:0002032!6.56e-33!165;CL:0000837!6.56e-33!165;CL:0000134!2.45e-14!358;CL:0002320!6.40e-14!365;CL:0000219!1.88e-12!390;CL:0000048!1.32e-11!430;CL:0000723!2.42e-11!436;CL:0000034!5.30e-11!444;CL:0000842!2.95e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-107;33!CL:0002057;1.19e-107;33!CL:0000473;1.88e-74;39!CL:0000234;1.88e-74;39!CL:0000576;4.02e-56;48!CL:0000766;2.22e-36;69!CL:0000763;1.19e-15;100!CL:0002087;1.62e-14;104!CL:0000738;2.66e-12;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.23e-102,42;CL:0002057,8.23e-102,42;CL:0000473,1.22e-88,48;CL:0000234,1.22e-88,48;CL:0002194,2.70e-76,59;CL:0000576,2.70e-76,59;CL:0000040,2.70e-76,59;CL:0000559,2.70e-76,59;CL:0002009,1.02e-73,61;CL:0000839,6.08e-68,66;CL:0000766,2.81e-67,72;CL:0000557,6.87e-67,67;CL:0000763,7.99e-44,108;CL:0000049,7.99e-44,108;CL:0002087,1.16e-37,115;CL:0002031,6.02e-36,120;CL:0000738,4.36e-34,136;CL:0002032,3.15e-28,161;CL:0000837,3.15e-28,161;CL:0000037,6.74e-27,168;CL:0000988,2.44e-25,177;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.49e-75;42!CL:0000049;1.96e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;8.16e-09;1!DOID:3165;8.16e-09;1!DOID:0060121;8.16e-09;1!DOID:2438;8.16e-09;1!DOID:4418;8.16e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,9.17e-09,1;DOID:3165,9.17e-09,1;DOID:0060121,9.17e-09,1;DOID:2438,9.17e-09,1;DOID:4418,9.17e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.79e-66!80;UBERON:0001474!3.03e-61!86;UBERON:0002390!3.17e-57!102;UBERON:0003061!3.17e-57!102;UBERON:0002193!1.50e-51!112;UBERON:0004765!3.04e-51!101;UBERON:0001434!3.04e-51!101;UBERON:0002405!3.08e-44!115;UBERON:0002204!2.13e-30!167;UBERON:0003081!4.15e-25!216;UBERON:0002384!2.37e-13!375;UBERON:0000926!2.37e-08!448;UBERON:0004120!2.37e-08!448;UBERON:0006603!2.37e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.22e-58,76;UBERON:0001474,3.92e-54,82;UBERON:0004765,4.79e-49,90;UBERON:0002405,2.32e-47,93;UBERON:0002390,8.86e-45,98;UBERON:0003061,8.86e-45,98;UBERON:0001434,8.10e-44,100;UBERON:0002193,2.53e-40,108;UBERON:0002204,8.32e-25,167;UBERON:0003081,9.91e-20,203;UBERON:0000926,2.73e-11,315;UBERON:0004120,2.73e-11,315;UBERON:0006603,2.73e-11,315;UBERON:0002384,5.43e-10,371 | |||
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|short_description=p@chr11:35095489..35095495,- | |||
}} |
Revision as of 17:35, 10 September 2013
Short description: | p@chr11:35095489..35095495, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:35095489..35095495, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.23e-102 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.23e-102 | 42 |
defensive cell | 1.22e-88 | 48 |
phagocyte | 1.22e-88 | 48 |
monopoietic cell | 2.70e-76 | 59 |
monocyte | 2.70e-76 | 59 |
monoblast | 2.70e-76 | 59 |
promonocyte | 2.70e-76 | 59 |
macrophage dendritic cell progenitor | 1.02e-73 | 61 |
myeloid lineage restricted progenitor cell | 6.08e-68 | 66 |
myeloid leukocyte | 2.81e-67 | 72 |
granulocyte monocyte progenitor cell | 6.87e-67 | 67 |
myeloid cell | 7.99e-44 | 108 |
common myeloid progenitor | 7.99e-44 | 108 |
nongranular leukocyte | 1.16e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 6.02e-36 | 120 |
leukocyte | 4.36e-34 | 136 |
hematopoietic oligopotent progenitor cell | 3.15e-28 | 161 |
hematopoietic multipotent progenitor cell | 3.15e-28 | 161 |
hematopoietic stem cell | 6.74e-27 | 168 |
hematopoietic cell | 2.44e-25 | 177 |
mesenchymal cell | 1.13e-10 | 354 |
connective tissue cell | 2.20e-10 | 361 |
motile cell | 2.28e-09 | 386 |
multi fate stem cell | 4.01e-08 | 427 |
somatic stem cell | 5.96e-08 | 433 |
stem cell | 9.95e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.22e-58 | 76 |
bone element | 3.92e-54 | 82 |
skeletal element | 4.79e-49 | 90 |
immune system | 2.32e-47 | 93 |
hematopoietic system | 8.86e-45 | 98 |
blood island | 8.86e-45 | 98 |
skeletal system | 8.10e-44 | 100 |
hemolymphoid system | 2.53e-40 | 108 |
musculoskeletal system | 8.32e-25 | 167 |
lateral plate mesoderm | 9.91e-20 | 203 |
mesoderm | 2.73e-11 | 315 |
mesoderm-derived structure | 2.73e-11 | 315 |
presumptive mesoderm | 2.73e-11 | 315 |
connective tissue | 5.43e-10 | 371 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 9.17e-09 | 1 |
skin benign neoplasm | 9.17e-09 | 1 |
integumentary system benign neoplasm | 9.17e-09 | 1 |
dermis tumor | 9.17e-09 | 1 |
cutaneous fibrous histiocytoma | 9.17e-09 | 1 |
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