FFCP PHASE1:Hg19::chr11:35222629..35222660,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=960|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1681|TSSclassifier=W|UniProt=|association_with_transcript=-30bp_to_ENST00000534082_5end|description=CAGE_peak_25_at_CD44_5end|id=chr11:35222629..35222660,+|ontology_enrichment_celltype=CL:0002057!2.67e-25!42;CL:0000860!8.92e-23!45;CL:0002076!1.02e-20!43;CL:0002009!1.51e-13!65;CL:0002194!2.06e-13!63;CL:0000576!2.06e-13!63;CL:0000040!2.06e-13!63;CL:0000559!2.06e-13!63;CL:0000223!3.27e-13!59;CL:0002159!1.50e-12!13;CL:0000557!3.19e-12!71;CL:0000839!9.68e-12!70;CL:0000766!1.51e-11!76;CL:0002251!5.01e-11!21;CL:0002087!1.71e-09!119;CL:0002368!1.25e-08!13;CL:0002031!1.31e-08!124;CL:0000738!1.70e-08!140;CL:0000240!2.00e-07!6;CL:0000311!2.00e-07!6;CL:0000079!2.00e-07!6;CL:0000237!2.00e-07!6;CL:0000036!2.00e-07!6;CL:0000357!2.00e-07!6;CL:0000114!2.00e-07!6;CL:0000362!2.71e-07!8;CL:0000063!7.51e-07!578;CL:0000763!8.75e-07!112;CL:0000049!8.75e-07!112|ontology_enrichment_celltype_v019=CL:0000860;3.93e-43;33!CL:0002057;3.93e-43;33!CL:0000473;8.13e-29;39!CL:0000234;8.13e-29;39!CL:0000576;2.21e-19;48!CL:0002159;7.45e-18;14!CL:0002076;1.82e-16;42!CL:0002368;6.06e-16;13!CL:0000244;3.51e-11;4!CL:0000731;3.51e-11;4!CL:0000766;5.19e-10;69!CL:0002621;1.62e-09;3!CL:0002166;1.95e-09;3!CL:0000307;2.40e-08;3!CL:0002251;5.68e-08;20!CL:0000240;1.40e-07;6!CL:0000311;1.40e-07;6!CL:0000079;1.40e-07;6!CL:0000237;1.40e-07;6!CL:0000362;1.57e-07;9!CL:0002327;2.10e-07;4!CL:0002202;4.12e-07;9!CL:0002632;4.12e-07;9!CL:0002077;9.43e-07;34|ontology_enrichment_celltype_v019_2=CL:0000860,9.90e-36,42;CL:0002057,9.90e-36,42;CL:0000473,2.25e-30,48;CL:0000234,2.25e-30,48;CL:0002194,6.75e-23,59;CL:0000576,6.75e-23,59;CL:0000040,6.75e-23,59;CL:0000559,6.75e-23,59;CL:0002009,6.18e-22,61;CL:0002076,1.06e-21,42;CL:0000839,8.71e-20,66;CL:0000557,2.15e-19,67;CL:0002159,6.36e-18,14;CL:0000766,1.33e-17,72;CL:0002368,8.01e-16,13;CL:0000223,3.03e-14,58;CL:0000244,2.99e-11,4;CL:0000731,2.99e-11,4;CL:0000066,6.56e-11,253;CL:0000763,1.15e-09,108;CL:0000049,1.15e-09,108;CL:0002166,1.60e-09,3;CL:0002621,1.74e-09,3;CL:0002087,1.02e-08,115;CL:0000068,3.62e-08,3;CL:0000069,3.62e-08,3;CL:0000307,3.62e-08,3;CL:0000377,3.62e-08,3;CL:0002031,4.12e-08,120;CL:0002251,5.52e-08,20;CL:0000362,1.47e-07,9;CL:0000240,1.56e-07,6;CL:0000311,1.56e-07,6;CL:0000079,1.56e-07,6;CL:0000237,1.56e-07,6;CL:0000036,1.56e-07,6;CL:0000357,1.56e-07,6;CL:0000114,1.56e-07,6;CL:0002077,1.80e-07,34;CL:0002327,2.08e-07,4;CL:0002202,5.18e-07,9;CL:0002632,5.18e-07,9|ontology_enrichment_development_v019=CL:0002057;1.29e-26;42!CL:0000377;2.40e-08;3!CL:0000223;3.04e-08;58!CL:0000357;1.40e-07;6!CL:0000114;1.40e-07;6|ontology_enrichment_disease=DOID:1749!3.46e-09!14|ontology_enrichment_disease_v019=DOID:1749;6.32e-09;14|ontology_enrichment_disease_v019_2=DOID:1749,5.50e-09,14|ontology_enrichment_uberon=UBERON:0002371!1.23e-09!80;UBERON:0004765!1.52e-08!101;UBERON:0001434!1.52e-08!101;UBERON:0002390!2.29e-08!102;UBERON:0003061!2.29e-08!102;UBERON:0001474!2.96e-08!86;UBERON:0000344!2.08e-07!12;UBERON:0000974!2.53e-07!10;UBERON:0005910!4.26e-07!6;UBERON:0002193!4.45e-07!112;UBERON:0001004!7.92e-07!72|ontology_enrichment_uberon_v019=UBERON:0000486;1.30e-10;12!UBERON:0001949;1.62e-09;3!UBERON:0000365;5.98e-09;5!UBERON:0003729;1.83e-07;13!UBERON:0005910;1.85e-07;6!UBERON:0001911;2.10e-07;4!UBERON:0001708;3.68e-07;4!UBERON:0008895;3.68e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004765,5.34e-17,90;UBERON:0002371,2.43e-16,76;UBERON:0001474,1.11e-14,82;UBERON:0001434,1.40e-14,100;UBERON:0002405,3.33e-12,93;UBERON:0002390,2.88e-11,98;UBERON:0003061,2.88e-11,98;UBERON:0002193,1.15e-09,108;UBERON:0001949,1.74e-09,3;UBERON:0000365,5.26e-09,5;UBERON:0005910,1.67e-07,6;UBERON:0003729,1.91e-07,13;UBERON:0001911,2.08e-07,4;UBERON:0005333,2.08e-07,4;UBERON:0008425,2.08e-07,4;UBERON:0005311,2.08e-07,4;UBERON:0001708,3.18e-07,4;UBERON:0008895,3.18e-07,4;UBERON:0002050,9.94e-07,564|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,2.409647350226,2.58827807116751,0,0,0,0,0.802177789880567,0,0,0,0,1.45398238779565,0.377875943688809,0.727752183563449,1.39457422143411,2.46700732813095,3.09706370895104,4.60307827715441,3.07392847834921,1.18241114944293,3.7922024881028,8.39130088658974,9.47985406160392,3.01187743268168,1.09162460023138,1.34834090667051,7.03992952453076,1.92557416245656,5.11469700639233,0.659702600373432,0.797854630486527,0.426224750532694,14.5104619314292,7.37600792098482,9.9651559839292,4.01997864410789,3.65038042894141,1.52032191293582,7.87019353423379,4.05105399586321,5.69632297393592,0,0,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0.444859689486181,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0.651083453856419,0,0,0,0,0.236777252044017,0,0.604820229674197,0,0.579297615531196,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1681 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_ENST00000534082_5end | |||
|description=CAGE_peak_25_at_CD44_5end | |||
|id=chr11:35222629..35222660,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.67e-25!42;CL:0000860!8.92e-23!45;CL:0002076!1.02e-20!43;CL:0002009!1.51e-13!65;CL:0002194!2.06e-13!63;CL:0000576!2.06e-13!63;CL:0000040!2.06e-13!63;CL:0000559!2.06e-13!63;CL:0000223!3.27e-13!59;CL:0002159!1.50e-12!13;CL:0000557!3.19e-12!71;CL:0000839!9.68e-12!70;CL:0000766!1.51e-11!76;CL:0002251!5.01e-11!21;CL:0002087!1.71e-09!119;CL:0002368!1.25e-08!13;CL:0002031!1.31e-08!124;CL:0000738!1.70e-08!140;CL:0000240!2.00e-07!6;CL:0000311!2.00e-07!6;CL:0000079!2.00e-07!6;CL:0000237!2.00e-07!6;CL:0000036!2.00e-07!6;CL:0000357!2.00e-07!6;CL:0000114!2.00e-07!6;CL:0000362!2.71e-07!8;CL:0000063!7.51e-07!578;CL:0000763!8.75e-07!112;CL:0000049!8.75e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.93e-43;33!CL:0002057;3.93e-43;33!CL:0000473;8.13e-29;39!CL:0000234;8.13e-29;39!CL:0000576;2.21e-19;48!CL:0002159;7.45e-18;14!CL:0002076;1.82e-16;42!CL:0002368;6.06e-16;13!CL:0000244;3.51e-11;4!CL:0000731;3.51e-11;4!CL:0000766;5.19e-10;69!CL:0002621;1.62e-09;3!CL:0002166;1.95e-09;3!CL:0000307;2.40e-08;3!CL:0002251;5.68e-08;20!CL:0000240;1.40e-07;6!CL:0000311;1.40e-07;6!CL:0000079;1.40e-07;6!CL:0000237;1.40e-07;6!CL:0000362;1.57e-07;9!CL:0002327;2.10e-07;4!CL:0002202;4.12e-07;9!CL:0002632;4.12e-07;9!CL:0002077;9.43e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.90e-36,42;CL:0002057,9.90e-36,42;CL:0000473,2.25e-30,48;CL:0000234,2.25e-30,48;CL:0002194,6.75e-23,59;CL:0000576,6.75e-23,59;CL:0000040,6.75e-23,59;CL:0000559,6.75e-23,59;CL:0002009,6.18e-22,61;CL:0002076,1.06e-21,42;CL:0000839,8.71e-20,66;CL:0000557,2.15e-19,67;CL:0002159,6.36e-18,14;CL:0000766,1.33e-17,72;CL:0002368,8.01e-16,13;CL:0000223,3.03e-14,58;CL:0000244,2.99e-11,4;CL:0000731,2.99e-11,4;CL:0000066,6.56e-11,253;CL:0000763,1.15e-09,108;CL:0000049,1.15e-09,108;CL:0002166,1.60e-09,3;CL:0002621,1.74e-09,3;CL:0002087,1.02e-08,115;CL:0000068,3.62e-08,3;CL:0000069,3.62e-08,3;CL:0000307,3.62e-08,3;CL:0000377,3.62e-08,3;CL:0002031,4.12e-08,120;CL:0002251,5.52e-08,20;CL:0000362,1.47e-07,9;CL:0000240,1.56e-07,6;CL:0000311,1.56e-07,6;CL:0000079,1.56e-07,6;CL:0000237,1.56e-07,6;CL:0000036,1.56e-07,6;CL:0000357,1.56e-07,6;CL:0000114,1.56e-07,6;CL:0002077,1.80e-07,34;CL:0002327,2.08e-07,4;CL:0002202,5.18e-07,9;CL:0002632,5.18e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-26;42!CL:0000377;2.40e-08;3!CL:0000223;3.04e-08;58!CL:0000357;1.40e-07;6!CL:0000114;1.40e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!3.46e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.32e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.50e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.23e-09!80;UBERON:0004765!1.52e-08!101;UBERON:0001434!1.52e-08!101;UBERON:0002390!2.29e-08!102;UBERON:0003061!2.29e-08!102;UBERON:0001474!2.96e-08!86;UBERON:0000344!2.08e-07!12;UBERON:0000974!2.53e-07!10;UBERON:0005910!4.26e-07!6;UBERON:0002193!4.45e-07!112;UBERON:0001004!7.92e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.30e-10;12!UBERON:0001949;1.62e-09;3!UBERON:0000365;5.98e-09;5!UBERON:0003729;1.83e-07;13!UBERON:0005910;1.85e-07;6!UBERON:0001911;2.10e-07;4!UBERON:0001708;3.68e-07;4!UBERON:0008895;3.68e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,5.34e-17,90;UBERON:0002371,2.43e-16,76;UBERON:0001474,1.11e-14,82;UBERON:0001434,1.40e-14,100;UBERON:0002405,3.33e-12,93;UBERON:0002390,2.88e-11,98;UBERON:0003061,2.88e-11,98;UBERON:0002193,1.15e-09,108;UBERON:0001949,1.74e-09,3;UBERON:0000365,5.26e-09,5;UBERON:0005910,1.67e-07,6;UBERON:0003729,1.91e-07,13;UBERON:0001911,2.08e-07,4;UBERON:0005333,2.08e-07,4;UBERON:0008425,2.08e-07,4;UBERON:0005311,2.08e-07,4;UBERON:0001708,3.18e-07,4;UBERON:0008895,3.18e-07,4;UBERON:0002050,9.94e-07,564 | |||
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|short_description=p25@CD44 | |||
}} |
Revision as of 17:37, 10 September 2013
Short description: | p25@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_CD44_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000534082_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal element | 5.34e-17 | 90 |
bone marrow | 2.43e-16 | 76 |
bone element | 1.11e-14 | 82 |
skeletal system | 1.40e-14 | 100 |
immune system | 3.33e-12 | 93 |
hematopoietic system | 2.88e-11 | 98 |
blood island | 2.88e-11 | 98 |
hemolymphoid system | 1.15e-09 | 108 |
gingival epithelium | 1.74e-09 | 3 |
urothelium | 5.26e-09 | 5 |
transitional epithelium | 1.67e-07 | 6 |
mouth mucosa | 1.91e-07 | 13 |
mammary gland | 2.08e-07 | 4 |
mammary bud | 2.08e-07 | 4 |
mammary ridge | 2.08e-07 | 4 |
mammary placode | 2.08e-07 | 4 |
jaw skeleton | 3.18e-07 | 4 |
splanchnocranium | 3.18e-07 | 4 |
embryonic structure | 9.94e-07 | 564 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.50e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.