FFCP PHASE1:Hg19::chr11:59950486..59950515,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64231|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13375|TSSclassifier=S|UniProt=E7EMT7,G5EA21|association_with_transcript=0bp_to_ENST00000420732,ENST00000426738,ENST00000525549,ENST00000533023_5end|coexpression_cluster_id=C294|description=CAGE_peak_2_at_MS4A6A_5end|id=chr11:59950486..59950515,-|ontology_enrichment_celltype=CL:0000766!5.72e-44!76;CL:0002194!1.73e-42!63;CL:0000576!1.73e-42!63;CL:0000040!1.73e-42!63;CL:0000559!1.73e-42!63;CL:0002009!6.08e-42!65;CL:0000557!1.14e-41!71;CL:0000839!1.17e-39!70;CL:0002057!3.34e-38!42;CL:0000763!4.05e-38!112;CL:0000049!4.05e-38!112;CL:0000860!2.51e-34!45;CL:0000037!1.39e-33!172;CL:0000566!1.39e-33!172;CL:0000738!5.47e-32!140;CL:0002032!8.19e-30!165;CL:0000837!8.19e-30!165;CL:0000988!1.33e-29!182;CL:0002087!2.48e-29!119;CL:0002031!5.02e-27!124;CL:0002393!3.17e-08!9;CL:0002397!3.17e-08!9|ontology_enrichment_celltype_v019=CL:0000860;3.91e-33;33!CL:0002057;3.91e-33;33!CL:0000576;1.22e-32;48!CL:0000473;2.81e-30;39!CL:0000234;2.81e-30;39!CL:0000766;6.34e-24;69!CL:0000763;7.64e-15;100!CL:0002087;1.02e-09;104!CL:0000738;2.88e-08;136!CL:0002393;1.18e-07;6!CL:0002397;1.18e-07;6|ontology_enrichment_celltype_v019_2=CL:0002194,2.73e-55,59;CL:0000576,2.73e-55,59;CL:0000040,2.73e-55,59;CL:0000559,2.73e-55,59;CL:0002009,1.44e-54,61;CL:0000766,6.02e-54,72;CL:0000557,3.43e-51,67;CL:0000839,7.37e-49,66;CL:0000473,8.45e-48,48;CL:0000234,8.45e-48,48;CL:0000860,1.79e-44,42;CL:0002057,1.79e-44,42;CL:0000763,1.25e-42,108;CL:0000049,1.25e-42,108;CL:0000738,2.63e-34,136;CL:0000037,1.56e-33,168;CL:0002087,2.64e-32,115;CL:0000988,3.34e-30,177;CL:0002032,2.61e-29,161;CL:0000837,2.61e-29,161;CL:0002031,2.77e-28,120;CL:0002393,2.32e-09,9;CL:0002397,2.32e-09,9|ontology_enrichment_development_v019=CL:0002057;6.39e-32;42!CL:0000049;1.51e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.17e-44!115;UBERON:0002390!3.22e-43!102;UBERON:0003061!3.22e-43!102;UBERON:0002193!3.41e-40!112;UBERON:0002371!1.81e-35!80;UBERON:0001474!3.70e-31!86;UBERON:0002405!5.09e-29!115;UBERON:0004765!1.54e-23!101;UBERON:0001434!1.54e-23!101;UBERON:0003081!7.49e-15!216;UBERON:0001049!1.74e-09!57;UBERON:0005068!1.74e-09!57;UBERON:0006241!1.74e-09!57;UBERON:0007135!1.74e-09!57;UBERON:0002204!4.32e-09!167;UBERON:0000178!1.09e-07!15;UBERON:0000179!1.09e-07!15;UBERON:0000463!1.09e-07!15;UBERON:0003080!2.81e-07!42;UBERON:0002616!6.91e-07!59;UBERON:0002780!7.24e-07!41;UBERON:0001890!7.24e-07!41;UBERON:0006240!7.24e-07!41|ontology_enrichment_uberon_v019=UBERON:0000178;5.30e-09;15!UBERON:0000179;5.30e-09;15!UBERON:0000463;5.30e-09;15!UBERON:0007023;6.43e-08;114|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-53,98;UBERON:0003061,1.39e-53,98;UBERON:0002193,3.27e-49,108;UBERON:0002371,4.77e-44,76;UBERON:0002405,1.51e-40,93;UBERON:0001474,4.34e-39,82;UBERON:0004765,1.53e-33,90;UBERON:0007023,1.04e-32,114;UBERON:0001434,6.53e-28,100;UBERON:0003081,1.30e-21,203;UBERON:0002204,1.33e-11,167;UBERON:0000926,2.55e-09,315;UBERON:0004120,2.55e-09,315;UBERON:0006603,2.55e-09,315;UBERON:0000178,5.16e-09,15;UBERON:0000179,5.16e-09,15;UBERON:0000463,5.16e-09,15;UBERON:0000479,3.37e-08,773|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.534893840235659,0.738905305049512,0.472264687882075,34.2226920858546,24.9489108763188,36.0721567326457,0,0,0,0,0,9.10161361938026,34.9017107375083,21.8593447742454,31.4665762537985,105.688103841244,53.1185612271126,81.9090305076713,25.8808865027625,31.3637033261712,17.4660524055228,29.9833457608333,24.6700732813095,23.5376841880279,34.8107794709802,43.8034808164762,36.1817811729535,44.1274471342872,38.0835963314457,31.1480919166986,32.377682401328,34.9319872074043,25.8432007111847,51.1160100259407,46.2137798989575,28.1308335351578,30.6761709173646,38.4964859209749,27.7046087846251,49.6257798054879,31.7735725827038,22.4216009638407,45.2247597462138,46.9334626578181,41.9174470280875,39.350967671169,43.8250386825202,37.3425617180244,20.7030180585703,36.3553352940224,51.7856854405688,86.8300318762407,100.017810632443,72.8086907737773,2.56511469367124,2.58591680358817,3.83594722905731,0,0,0.889509253863555,2.56038133539904,1.60158394814405,0,3.30522436392431,0,0,1.76171156811282,0.382273228125229,0,3.92355994087075,6.847986204152,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0,0,0.34362744548263,0.253019692019503,1.59282707162048,1.30216690771284,0,2.55977702432214,2.17577238962511,7.49584359314075,4.2619905367923,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.0956652079634,0,0,1.29818957461873,1.74129737299267,12.2321323677356,63.6769966895263,68.0673943828352,39.7459526422634,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64231 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13375 | |||
|TSSclassifier=S | |||
|UniProt=E7EMT7,G5EA21 | |||
|association_with_transcript=0bp_to_ENST00000420732,ENST00000426738,ENST00000525549,ENST00000533023_5end | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_2_at_MS4A6A_5end | |||
|id=chr11:59950486..59950515,- | |||
|ontology_enrichment_celltype=CL:0000766!5.72e-44!76;CL:0002194!1.73e-42!63;CL:0000576!1.73e-42!63;CL:0000040!1.73e-42!63;CL:0000559!1.73e-42!63;CL:0002009!6.08e-42!65;CL:0000557!1.14e-41!71;CL:0000839!1.17e-39!70;CL:0002057!3.34e-38!42;CL:0000763!4.05e-38!112;CL:0000049!4.05e-38!112;CL:0000860!2.51e-34!45;CL:0000037!1.39e-33!172;CL:0000566!1.39e-33!172;CL:0000738!5.47e-32!140;CL:0002032!8.19e-30!165;CL:0000837!8.19e-30!165;CL:0000988!1.33e-29!182;CL:0002087!2.48e-29!119;CL:0002031!5.02e-27!124;CL:0002393!3.17e-08!9;CL:0002397!3.17e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.91e-33;33!CL:0002057;3.91e-33;33!CL:0000576;1.22e-32;48!CL:0000473;2.81e-30;39!CL:0000234;2.81e-30;39!CL:0000766;6.34e-24;69!CL:0000763;7.64e-15;100!CL:0002087;1.02e-09;104!CL:0000738;2.88e-08;136!CL:0002393;1.18e-07;6!CL:0002397;1.18e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.73e-55,59;CL:0000576,2.73e-55,59;CL:0000040,2.73e-55,59;CL:0000559,2.73e-55,59;CL:0002009,1.44e-54,61;CL:0000766,6.02e-54,72;CL:0000557,3.43e-51,67;CL:0000839,7.37e-49,66;CL:0000473,8.45e-48,48;CL:0000234,8.45e-48,48;CL:0000860,1.79e-44,42;CL:0002057,1.79e-44,42;CL:0000763,1.25e-42,108;CL:0000049,1.25e-42,108;CL:0000738,2.63e-34,136;CL:0000037,1.56e-33,168;CL:0002087,2.64e-32,115;CL:0000988,3.34e-30,177;CL:0002032,2.61e-29,161;CL:0000837,2.61e-29,161;CL:0002031,2.77e-28,120;CL:0002393,2.32e-09,9;CL:0002397,2.32e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.39e-32;42!CL:0000049;1.51e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.17e-44!115;UBERON:0002390!3.22e-43!102;UBERON:0003061!3.22e-43!102;UBERON:0002193!3.41e-40!112;UBERON:0002371!1.81e-35!80;UBERON:0001474!3.70e-31!86;UBERON:0002405!5.09e-29!115;UBERON:0004765!1.54e-23!101;UBERON:0001434!1.54e-23!101;UBERON:0003081!7.49e-15!216;UBERON:0001049!1.74e-09!57;UBERON:0005068!1.74e-09!57;UBERON:0006241!1.74e-09!57;UBERON:0007135!1.74e-09!57;UBERON:0002204!4.32e-09!167;UBERON:0000178!1.09e-07!15;UBERON:0000179!1.09e-07!15;UBERON:0000463!1.09e-07!15;UBERON:0003080!2.81e-07!42;UBERON:0002616!6.91e-07!59;UBERON:0002780!7.24e-07!41;UBERON:0001890!7.24e-07!41;UBERON:0006240!7.24e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.30e-09;15!UBERON:0000179;5.30e-09;15!UBERON:0000463;5.30e-09;15!UBERON:0007023;6.43e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-53,98;UBERON:0003061,1.39e-53,98;UBERON:0002193,3.27e-49,108;UBERON:0002371,4.77e-44,76;UBERON:0002405,1.51e-40,93;UBERON:0001474,4.34e-39,82;UBERON:0004765,1.53e-33,90;UBERON:0007023,1.04e-32,114;UBERON:0001434,6.53e-28,100;UBERON:0003081,1.30e-21,203;UBERON:0002204,1.33e-11,167;UBERON:0000926,2.55e-09,315;UBERON:0004120,2.55e-09,315;UBERON:0006603,2.55e-09,315;UBERON:0000178,5.16e-09,15;UBERON:0000179,5.16e-09,15;UBERON:0000463,5.16e-09,15;UBERON:0000479,3.37e-08,773 | |||
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| |||
|short_description=p2@MS4A6A | |||
}} |
Revision as of 18:17, 10 September 2013
Short description: | p2@MS4A6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MS4A6A_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000420732, ENST00000426738, ENST00000525549, ENST00000533023_5end |
EntrezGene: | MS4A6A |
HGNC: | 13375 |
UniProt: | E7EMT7G5EA21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.73e-55 | 59 |
monocyte | 2.73e-55 | 59 |
monoblast | 2.73e-55 | 59 |
promonocyte | 2.73e-55 | 59 |
macrophage dendritic cell progenitor | 1.44e-54 | 61 |
myeloid leukocyte | 6.02e-54 | 72 |
granulocyte monocyte progenitor cell | 3.43e-51 | 67 |
myeloid lineage restricted progenitor cell | 7.37e-49 | 66 |
defensive cell | 8.45e-48 | 48 |
phagocyte | 8.45e-48 | 48 |
classical monocyte | 1.79e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.79e-44 | 42 |
myeloid cell | 1.25e-42 | 108 |
common myeloid progenitor | 1.25e-42 | 108 |
leukocyte | 2.63e-34 | 136 |
hematopoietic stem cell | 1.56e-33 | 168 |
nongranular leukocyte | 2.64e-32 | 115 |
hematopoietic cell | 3.34e-30 | 177 |
hematopoietic oligopotent progenitor cell | 2.61e-29 | 161 |
hematopoietic multipotent progenitor cell | 2.61e-29 | 161 |
hematopoietic lineage restricted progenitor cell | 2.77e-28 | 120 |
intermediate monocyte | 2.32e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.32e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.39e-53 | 98 |
blood island | 1.39e-53 | 98 |
hemolymphoid system | 3.27e-49 | 108 |
bone marrow | 4.77e-44 | 76 |
immune system | 1.51e-40 | 93 |
bone element | 4.34e-39 | 82 |
skeletal element | 1.53e-33 | 90 |
adult organism | 1.04e-32 | 114 |
skeletal system | 6.53e-28 | 100 |
lateral plate mesoderm | 1.30e-21 | 203 |
musculoskeletal system | 1.33e-11 | 167 |
mesoderm | 2.55e-09 | 315 |
mesoderm-derived structure | 2.55e-09 | 315 |
presumptive mesoderm | 2.55e-09 | 315 |
blood | 5.16e-09 | 15 |
haemolymphatic fluid | 5.16e-09 | 15 |
organism substance | 5.16e-09 | 15 |
tissue | 3.37e-08 | 773 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.