FFCP PHASE1:Hg19::chr11:67442196..67442216,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=222|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=411|TSSclassifier=S|UniProt=E9PJV0|association_with_transcript=0bp_to_ENST00000525827_5end|description=CAGE_peak_4_at_ALDH3B2_5end|id=chr11:67442196..67442216,-|ontology_enrichment_celltype=CL:0002541!3.15e-11!3;CL:0000066!1.95e-08!254;CL:0002251!3.99e-08!21;CL:0000039!6.76e-08!7;CL:0000586!6.76e-08!7;CL:0002076!7.26e-08!43;CL:0002536!1.67e-07!2;CL:0000223!2.98e-07!59|ontology_enrichment_celltype_v019=CL:0002541;6.00e-24;3!CL:0000349;6.29e-19;19!CL:0000039;8.74e-11;7!CL:0000586;8.74e-11;7!CL:0002537;5.81e-07;5|ontology_enrichment_celltype_v019_2=CL:0002541,5.35e-24,3;CL:0000349,7.97e-19,19;CL:0000039,9.67e-11,7;CL:0000586,9.67e-11,7;CL:0002537,6.18e-07,5|ontology_enrichment_development_v019=UBERON:0003124;1.96e-09;1!UBERON:0008801;2.50e-09;1!UBERON:0005754;6.72e-09;1|ontology_enrichment_disease=DOID:305!1.20e-14!106;DOID:5093!5.52e-14!4;DOID:1612!5.52e-14!4;DOID:0050687!2.54e-12!143;DOID:299!4.41e-11!25|ontology_enrichment_disease_v019=DOID:5093;8.32e-18;4!DOID:1612;8.32e-18;4!DOID:0050619;1.96e-09;1!DOID:1357;1.96e-09;1|ontology_enrichment_disease_v019_2=DOID:5093,5.25e-18,4;DOID:1612,5.25e-18,4;DOID:0050619,1.89e-09,1;DOID:1357,1.89e-09,1|ontology_enrichment_uberon=UBERON:0005631!2.41e-22!14;UBERON:0000158!2.41e-22!14;UBERON:0003124!2.10e-12!7;UBERON:0000478!4.00e-12!24;UBERON:0004923!5.50e-12!57;UBERON:0000305!1.34e-11!7;UBERON:0000476!3.15e-11!3;UBERON:0000920!3.15e-11!3;UBERON:0000344!3.74e-11!12;UBERON:0006947!1.22e-10!3;UBERON:0004054!1.22e-10!3;UBERON:0004871!4.19e-10!8;UBERON:0005904!4.49e-08!4;UBERON:0000077!3.32e-07!130;UBERON:0004119!8.22e-07!169;UBERON:0000925!8.22e-07!169;UBERON:0006595!8.22e-07!169|ontology_enrichment_uberon_v019=UBERON:0005631;4.36e-27;10!UBERON:0000158;4.36e-27;10!UBERON:0003124;6.00e-24;3!UBERON:0000920;6.00e-24;3!UBERON:0000478;2.01e-19;24!UBERON:0006947;4.89e-11;3!UBERON:0004054;4.89e-11;3!UBERON:0000305;2.74e-10;7!UBERON:0001764;1.96e-09;1!UBERON:0001825;1.96e-09;1!UBERON:0001831;2.50e-09;1!UBERON:0001567;2.50e-09;1!UBERON:0001000;6.72e-09;1!UBERON:0000998;6.72e-09;1!UBERON:0006868;6.72e-09;1!UBERON:0005352;6.72e-09;1!UBERON:0001987;9.37e-09;4!UBERON:0005904;1.70e-08;4!UBERON:0000310;1.96e-07;10!UBERON:0000058;2.39e-07;10!UBERON:0001443;8.47e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.81e-34,14;UBERON:0000158,7.81e-34,14;UBERON:0003124,1.21e-27,7;UBERON:0000920,5.35e-24,3;UBERON:0000478,2.53e-19,24;UBERON:0006947,6.65e-11,3;UBERON:0004054,6.65e-11,3;UBERON:0000305,3.55e-10,7;UBERON:0001764,1.89e-09,1;UBERON:0001825,1.89e-09,1;UBERON:0001831,2.22e-09,1;UBERON:0001567,2.22e-09,1;UBERON:0008801,2.22e-09,1;UBERON:0004871,5.73e-09,8;UBERON:0000998,7.27e-09,1;UBERON:0006868,7.27e-09,1;UBERON:0001000,9.91e-09,1;UBERON:0005352,9.91e-09,1;UBERON:0001987,1.03e-08,4;UBERON:0004340,1.03e-08,4;UBERON:0005904,2.13e-08,4;UBERON:0004175,1.62e-07,25;UBERON:0000310,1.64e-07,10;UBERON:0001443,7.21e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,1.18785872333055,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,2.60427761085233,0.437299999980979,0,0.227586896570999,1.01701460117107,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14748103602986,5.11618573135701,1.19512109114209,2.87101043758728,1.28236630762607,3.73124343213044,0,0,0,0,0,0,0,0,0,0.163232808159148,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,3.7176277597097,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0.284609546029793,0,3.12407529003236,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0.576361668616424,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=222 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=411 | |||
|TSSclassifier=S | |||
|UniProt=E9PJV0 | |||
|association_with_transcript=0bp_to_ENST00000525827_5end | |||
|description=CAGE_peak_4_at_ALDH3B2_5end | |||
|id=chr11:67442196..67442216,- | |||
|ontology_enrichment_celltype=CL:0002541!3.15e-11!3;CL:0000066!1.95e-08!254;CL:0002251!3.99e-08!21;CL:0000039!6.76e-08!7;CL:0000586!6.76e-08!7;CL:0002076!7.26e-08!43;CL:0002536!1.67e-07!2;CL:0000223!2.98e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.00e-24;3!CL:0000349;6.29e-19;19!CL:0000039;8.74e-11;7!CL:0000586;8.74e-11;7!CL:0002537;5.81e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.35e-24,3;CL:0000349,7.97e-19,19;CL:0000039,9.67e-11,7;CL:0000586,9.67e-11,7;CL:0002537,6.18e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.96e-09;1!UBERON:0008801;2.50e-09;1!UBERON:0005754;6.72e-09;1 | |||
|ontology_enrichment_disease=DOID:305!1.20e-14!106;DOID:5093!5.52e-14!4;DOID:1612!5.52e-14!4;DOID:0050687!2.54e-12!143;DOID:299!4.41e-11!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.32e-18;4!DOID:1612;8.32e-18;4!DOID:0050619;1.96e-09;1!DOID:1357;1.96e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.25e-18,4;DOID:1612,5.25e-18,4;DOID:0050619,1.89e-09,1;DOID:1357,1.89e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.41e-22!14;UBERON:0000158!2.41e-22!14;UBERON:0003124!2.10e-12!7;UBERON:0000478!4.00e-12!24;UBERON:0004923!5.50e-12!57;UBERON:0000305!1.34e-11!7;UBERON:0000476!3.15e-11!3;UBERON:0000920!3.15e-11!3;UBERON:0000344!3.74e-11!12;UBERON:0006947!1.22e-10!3;UBERON:0004054!1.22e-10!3;UBERON:0004871!4.19e-10!8;UBERON:0005904!4.49e-08!4;UBERON:0000077!3.32e-07!130;UBERON:0004119!8.22e-07!169;UBERON:0000925!8.22e-07!169;UBERON:0006595!8.22e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.36e-27;10!UBERON:0000158;4.36e-27;10!UBERON:0003124;6.00e-24;3!UBERON:0000920;6.00e-24;3!UBERON:0000478;2.01e-19;24!UBERON:0006947;4.89e-11;3!UBERON:0004054;4.89e-11;3!UBERON:0000305;2.74e-10;7!UBERON:0001764;1.96e-09;1!UBERON:0001825;1.96e-09;1!UBERON:0001831;2.50e-09;1!UBERON:0001567;2.50e-09;1!UBERON:0001000;6.72e-09;1!UBERON:0000998;6.72e-09;1!UBERON:0006868;6.72e-09;1!UBERON:0005352;6.72e-09;1!UBERON:0001987;9.37e-09;4!UBERON:0005904;1.70e-08;4!UBERON:0000310;1.96e-07;10!UBERON:0000058;2.39e-07;10!UBERON:0001443;8.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.81e-34,14;UBERON:0000158,7.81e-34,14;UBERON:0003124,1.21e-27,7;UBERON:0000920,5.35e-24,3;UBERON:0000478,2.53e-19,24;UBERON:0006947,6.65e-11,3;UBERON:0004054,6.65e-11,3;UBERON:0000305,3.55e-10,7;UBERON:0001764,1.89e-09,1;UBERON:0001825,1.89e-09,1;UBERON:0001831,2.22e-09,1;UBERON:0001567,2.22e-09,1;UBERON:0008801,2.22e-09,1;UBERON:0004871,5.73e-09,8;UBERON:0000998,7.27e-09,1;UBERON:0006868,7.27e-09,1;UBERON:0001000,9.91e-09,1;UBERON:0005352,9.91e-09,1;UBERON:0001987,1.03e-08,4;UBERON:0004340,1.03e-08,4;UBERON:0005904,2.13e-08,4;UBERON:0004175,1.62e-07,25;UBERON:0000310,1.64e-07,10;UBERON:0001443,7.21e-07,11 | |||
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|short_description=p4@ALDH3B2 | |||
}} |
Revision as of 19:19, 10 September 2013
Short description: | p4@ALDH3B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ALDH3B2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000525827_5end |
EntrezGene: | ALDH3B2 |
HGNC: | 411 |
UniProt: | E9PJV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.35e-24 | 3 |
extraembryonic cell | 7.97e-19 | 19 |
germ line cell | 9.67e-11 | 7 |
germ cell | 9.67e-11 | 7 |
amnion mesenchymal stem cell | 6.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.81e-34 | 14 |
membranous layer | 7.81e-34 | 14 |
chorion | 1.21e-27 | 7 |
egg chorion | 5.35e-24 | 3 |
extraembryonic structure | 2.53e-19 | 24 |
male genital duct | 6.65e-11 | 3 |
internal male genitalia | 6.65e-11 | 3 |
amnion | 3.55e-10 | 7 |
maxillary sinus | 1.89e-09 | 1 |
paranasal sinus | 1.89e-09 | 1 |
parotid gland | 2.22e-09 | 1 |
cheek | 2.22e-09 | 1 |
parotid gland primordium | 2.22e-09 | 1 |
somatic layer of lateral plate mesoderm | 5.73e-09 | 8 |
seminal vesicle | 7.27e-09 | 1 |
seminal fluid secreting gland | 7.27e-09 | 1 |
vas deferens | 9.91e-09 | 1 |
spermatic cord | 9.91e-09 | 1 |
placenta | 1.03e-08 | 4 |
allantois | 1.03e-08 | 4 |
duct of male reproductive system | 2.13e-08 | 4 |
internal genitalia | 1.62e-07 | 25 |
breast | 1.64e-07 | 10 |
chest | 7.21e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.25e-18 | 4 |
breast cancer | 5.25e-18 | 4 |
paranasal sinus cancer | 1.89e-09 | 1 |
maxillary sinus cancer | 1.89e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.