FFCP PHASE1:Hg19::chr11:76886267..76886278,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:76886267..76886278,+|id=chr11:76886267..76886278,+|ontology_enrichment_celltype=CL:0002194!8.07e-40!63;CL:0000576!8.07e-40!63;CL:0000040!8.07e-40!63;CL:0000559!8.07e-40!63;CL:0002009!3.93e-38!65;CL:0002057!2.82e-36!42;CL:0000766!1.30e-35!76;CL:0000839!2.43e-34!70;CL:0000557!1.20e-33!71;CL:0000860!4.74e-33!45;CL:0000763!7.87e-27!112;CL:0000049!7.87e-27!112;CL:0002087!8.70e-21!119;CL:0000738!4.83e-19!140;CL:0000037!1.31e-17!172;CL:0000566!1.31e-17!172;CL:0002031!1.91e-16!124;CL:0002032!9.14e-16!165;CL:0000837!9.14e-16!165;CL:0000988!1.15e-15!182;CL:0002393!1.16e-07!9;CL:0002397!1.16e-07!9|ontology_enrichment_celltype_v019=CL:0000473;1.84e-38;39!CL:0000234;1.84e-38;39!CL:0000860;5.86e-32;33!CL:0002057;5.86e-32;33!CL:0000576;6.33e-29;48!CL:0000766;3.84e-18;69!CL:0000235;3.16e-16;6!CL:0000763;1.63e-11;100!CL:0002619;9.24e-09;3!CL:0000738;5.46e-07;136|ontology_enrichment_celltype_v019_2=CL:0000473,1.26e-48,48;CL:0000234,1.26e-48,48;CL:0002194,3.03e-46,59;CL:0000576,3.03e-46,59;CL:0000040,3.03e-46,59;CL:0000559,3.03e-46,59;CL:0002009,1.35e-44,61;CL:0000839,6.56e-41,66;CL:0000557,3.09e-40,67;CL:0000766,3.77e-37,72;CL:0000860,7.95e-36,42;CL:0002057,7.95e-36,42;CL:0000763,1.59e-33,108;CL:0000049,1.59e-33,108;CL:0002087,1.11e-23,115;CL:0000037,2.16e-21,168;CL:0002032,9.13e-21,161;CL:0000837,9.13e-21,161;CL:0002031,1.74e-20,120;CL:0000988,5.03e-20,177;CL:0000738,2.79e-19,136;CL:0000235,3.12e-16,6;CL:0002619,6.92e-09,3;CL:0000134,3.28e-07,354;CL:0002320,5.82e-07,361|ontology_enrichment_development_v019=CL:0002057;3.92e-24;42!CL:0000049;2.64e-10;108!UBERON:0010115;5.44e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:225;5.44e-07;1|ontology_enrichment_disease_v019_2=DOID:225,7.29e-07,1|ontology_enrichment_uberon=UBERON:0007023!3.29e-32!115;UBERON:0002390!3.75e-31!102;UBERON:0003061!3.75e-31!102;UBERON:0002371!1.46e-29!80;UBERON:0002193!8.13e-27!112;UBERON:0001474!1.85e-26!86;UBERON:0002405!3.02e-22!115;UBERON:0004765!1.72e-21!101;UBERON:0001434!1.72e-21!101;UBERON:0001049!8.15e-20!57;UBERON:0005068!8.15e-20!57;UBERON:0006241!8.15e-20!57;UBERON:0007135!8.15e-20!57;UBERON:0002616!9.54e-15!59;UBERON:0002780!1.54e-13!41;UBERON:0001890!1.54e-13!41;UBERON:0006240!1.54e-13!41;UBERON:0003080!4.62e-13!42;UBERON:0003075!1.34e-12!86;UBERON:0007284!1.34e-12!86;UBERON:0001017!1.31e-11!82;UBERON:0002346!1.36e-11!90;UBERON:0005743!2.05e-11!86;UBERON:0000955!4.27e-11!69;UBERON:0006238!4.27e-11!69;UBERON:0002020!1.59e-10!34;UBERON:0003528!1.59e-10!34;UBERON:0001893!3.80e-10!34;UBERON:0002308!1.39e-09!9;UBERON:0000125!1.39e-09!9;UBERON:0003081!1.39e-09!216;UBERON:0002791!1.80e-09!33;UBERON:0000073!1.83e-09!94;UBERON:0001016!1.83e-09!94;UBERON:0002204!6.30e-09!167;UBERON:0002298!8.31e-09!8;UBERON:0001869!1.30e-08!32;UBERON:0003076!2.85e-08!15;UBERON:0003057!2.85e-08!15;UBERON:0000062!6.98e-08!511;UBERON:0003056!8.25e-08!61;UBERON:0002420!1.66e-07!9;UBERON:0007245!1.66e-07!9;UBERON:0010009!1.66e-07!9;UBERON:0010011!1.66e-07!9;UBERON:0000454!1.66e-07!9;UBERON:0009663!2.97e-07!7|ontology_enrichment_uberon_v019=UBERON:0002363;5.44e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.73e-35,76;UBERON:0001474,4.32e-32,82;UBERON:0004765,7.65e-29,90;UBERON:0002390,1.31e-28,98;UBERON:0003061,1.31e-28,98;UBERON:0002405,9.10e-28,93;UBERON:0002193,1.59e-25,108;UBERON:0001434,1.66e-25,100;UBERON:0002204,8.22e-15,167;UBERON:0003081,2.67e-11,203;UBERON:0000926,5.30e-07,315;UBERON:0004120,5.30e-07,315;UBERON:0006603,5.30e-07,315;UBERON:0002363,6.88e-07,1;UBERON:0007645,6.88e-07,1;UBERON:0007647,6.88e-07,1;UBERON:0010115,6.88e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.77408061658038,0,0,0,0,0,0,2.21598163412751,1.60435557976113,0.868043482863407,2.01523926815932,0.971680998056939,1.80302897343931,0.726991193897824,0,1.21292030593908,0.929716147622738,0.411167888021826,0,0.28769239232215,1.2808035326455,0.47296445977717,0.344745680736619,1.93645405075148,0,0.752969358170419,1.09162460023138,0.449446968890169,0.918251677112708,0.320929027076094,0,0,0.797854630486527,1.70489900213078,1.7412554317715,1.13477044938228,0.622822248995575,1.00499466102697,1.5644487552606,1.52032191293582,0,2.20966581592539,1.58231193720442,0.422510572623884,0,0.628975936525128,1.90958672949042,1.50176892841506,2.08943262706204,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:76886267..76886278,+ | |||
|id=chr11:76886267..76886278,+ | |||
|ontology_enrichment_celltype=CL:0002194!8.07e-40!63;CL:0000576!8.07e-40!63;CL:0000040!8.07e-40!63;CL:0000559!8.07e-40!63;CL:0002009!3.93e-38!65;CL:0002057!2.82e-36!42;CL:0000766!1.30e-35!76;CL:0000839!2.43e-34!70;CL:0000557!1.20e-33!71;CL:0000860!4.74e-33!45;CL:0000763!7.87e-27!112;CL:0000049!7.87e-27!112;CL:0002087!8.70e-21!119;CL:0000738!4.83e-19!140;CL:0000037!1.31e-17!172;CL:0000566!1.31e-17!172;CL:0002031!1.91e-16!124;CL:0002032!9.14e-16!165;CL:0000837!9.14e-16!165;CL:0000988!1.15e-15!182;CL:0002393!1.16e-07!9;CL:0002397!1.16e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.84e-38;39!CL:0000234;1.84e-38;39!CL:0000860;5.86e-32;33!CL:0002057;5.86e-32;33!CL:0000576;6.33e-29;48!CL:0000766;3.84e-18;69!CL:0000235;3.16e-16;6!CL:0000763;1.63e-11;100!CL:0002619;9.24e-09;3!CL:0000738;5.46e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.26e-48,48;CL:0000234,1.26e-48,48;CL:0002194,3.03e-46,59;CL:0000576,3.03e-46,59;CL:0000040,3.03e-46,59;CL:0000559,3.03e-46,59;CL:0002009,1.35e-44,61;CL:0000839,6.56e-41,66;CL:0000557,3.09e-40,67;CL:0000766,3.77e-37,72;CL:0000860,7.95e-36,42;CL:0002057,7.95e-36,42;CL:0000763,1.59e-33,108;CL:0000049,1.59e-33,108;CL:0002087,1.11e-23,115;CL:0000037,2.16e-21,168;CL:0002032,9.13e-21,161;CL:0000837,9.13e-21,161;CL:0002031,1.74e-20,120;CL:0000988,5.03e-20,177;CL:0000738,2.79e-19,136;CL:0000235,3.12e-16,6;CL:0002619,6.92e-09,3;CL:0000134,3.28e-07,354;CL:0002320,5.82e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.92e-24;42!CL:0000049;2.64e-10;108!UBERON:0010115;5.44e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:225;5.44e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:225,7.29e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.29e-32!115;UBERON:0002390!3.75e-31!102;UBERON:0003061!3.75e-31!102;UBERON:0002371!1.46e-29!80;UBERON:0002193!8.13e-27!112;UBERON:0001474!1.85e-26!86;UBERON:0002405!3.02e-22!115;UBERON:0004765!1.72e-21!101;UBERON:0001434!1.72e-21!101;UBERON:0001049!8.15e-20!57;UBERON:0005068!8.15e-20!57;UBERON:0006241!8.15e-20!57;UBERON:0007135!8.15e-20!57;UBERON:0002616!9.54e-15!59;UBERON:0002780!1.54e-13!41;UBERON:0001890!1.54e-13!41;UBERON:0006240!1.54e-13!41;UBERON:0003080!4.62e-13!42;UBERON:0003075!1.34e-12!86;UBERON:0007284!1.34e-12!86;UBERON:0001017!1.31e-11!82;UBERON:0002346!1.36e-11!90;UBERON:0005743!2.05e-11!86;UBERON:0000955!4.27e-11!69;UBERON:0006238!4.27e-11!69;UBERON:0002020!1.59e-10!34;UBERON:0003528!1.59e-10!34;UBERON:0001893!3.80e-10!34;UBERON:0002308!1.39e-09!9;UBERON:0000125!1.39e-09!9;UBERON:0003081!1.39e-09!216;UBERON:0002791!1.80e-09!33;UBERON:0000073!1.83e-09!94;UBERON:0001016!1.83e-09!94;UBERON:0002204!6.30e-09!167;UBERON:0002298!8.31e-09!8;UBERON:0001869!1.30e-08!32;UBERON:0003076!2.85e-08!15;UBERON:0003057!2.85e-08!15;UBERON:0000062!6.98e-08!511;UBERON:0003056!8.25e-08!61;UBERON:0002420!1.66e-07!9;UBERON:0007245!1.66e-07!9;UBERON:0010009!1.66e-07!9;UBERON:0010011!1.66e-07!9;UBERON:0000454!1.66e-07!9;UBERON:0009663!2.97e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;5.44e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.73e-35,76;UBERON:0001474,4.32e-32,82;UBERON:0004765,7.65e-29,90;UBERON:0002390,1.31e-28,98;UBERON:0003061,1.31e-28,98;UBERON:0002405,9.10e-28,93;UBERON:0002193,1.59e-25,108;UBERON:0001434,1.66e-25,100;UBERON:0002204,8.22e-15,167;UBERON:0003081,2.67e-11,203;UBERON:0000926,5.30e-07,315;UBERON:0004120,5.30e-07,315;UBERON:0006603,5.30e-07,315;UBERON:0002363,6.88e-07,1;UBERON:0007645,6.88e-07,1;UBERON:0007647,6.88e-07,1;UBERON:0010115,6.88e-07,1 | |||
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|short_description=p@chr11:76886267..76886278,+ | |||
}} |
Revision as of 19:46, 10 September 2013
Short description: | p@chr11:76886267..76886278, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:76886267..76886278, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.26e-48 | 48 |
phagocyte | 1.26e-48 | 48 |
monopoietic cell | 3.03e-46 | 59 |
monocyte | 3.03e-46 | 59 |
monoblast | 3.03e-46 | 59 |
promonocyte | 3.03e-46 | 59 |
macrophage dendritic cell progenitor | 1.35e-44 | 61 |
myeloid lineage restricted progenitor cell | 6.56e-41 | 66 |
granulocyte monocyte progenitor cell | 3.09e-40 | 67 |
myeloid leukocyte | 3.77e-37 | 72 |
classical monocyte | 7.95e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.95e-36 | 42 |
myeloid cell | 1.59e-33 | 108 |
common myeloid progenitor | 1.59e-33 | 108 |
nongranular leukocyte | 1.11e-23 | 115 |
hematopoietic stem cell | 2.16e-21 | 168 |
hematopoietic oligopotent progenitor cell | 9.13e-21 | 161 |
hematopoietic multipotent progenitor cell | 9.13e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 1.74e-20 | 120 |
hematopoietic cell | 5.03e-20 | 177 |
leukocyte | 2.79e-19 | 136 |
macrophage | 3.12e-16 | 6 |
adult endothelial progenitor cell | 6.92e-09 | 3 |
mesenchymal cell | 3.28e-07 | 354 |
connective tissue cell | 5.82e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.73e-35 | 76 |
bone element | 4.32e-32 | 82 |
skeletal element | 7.65e-29 | 90 |
hematopoietic system | 1.31e-28 | 98 |
blood island | 1.31e-28 | 98 |
immune system | 9.10e-28 | 93 |
hemolymphoid system | 1.59e-25 | 108 |
skeletal system | 1.66e-25 | 100 |
musculoskeletal system | 8.22e-15 | 167 |
lateral plate mesoderm | 2.67e-11 | 203 |
mesoderm | 5.30e-07 | 315 |
mesoderm-derived structure | 5.30e-07 | 315 |
presumptive mesoderm | 5.30e-07 | 315 |
dura mater | 6.88e-07 | 1 |
future meninx | 6.88e-07 | 1 |
ectomeninx | 6.88e-07 | 1 |
future dura mater | 6.88e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
syndrome | 7.29e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.