FFCP PHASE1:Hg19::chr12:10251576..10251599,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51267|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24355|TSSclassifier=S|UniProt=Q8NC01|association_with_transcript=0bp_to_ENST00000315330_5end|coexpression_cluster_id=C1653|description=CAGE_peak_1_at_CLEC1A_5end|id=chr12:10251576..10251599,-|ontology_enrichment_celltype=CL:0002139!6.40e-25!24;CL:0000115!1.84e-20!35;CL:0000071!1.53e-18!18;CL:0002546!1.53e-18!18;CL:0002078!5.00e-14!44;CL:1000413!1.44e-09!9;CL:0000213!3.14e-09!57;CL:0000215!3.14e-09!57;CL:0005020!6.07e-08!6;CL:0002138!6.07e-08!6;CL:0005022!6.07e-08!6;CL:0002543!2.77e-07!6;CL:0002544!5.25e-07!6|ontology_enrichment_celltype_v019=CL:0002139;5.80e-32;24!CL:0000115;6.60e-24;36!CL:0000071;1.36e-23;18!CL:0002078;5.66e-14;45!CL:1000413;6.73e-12;9!CL:0002138;6.36e-10;6!CL:0000213;3.29e-09;58!CL:0000215;3.29e-09;58!CL:0002543;5.38e-09;6!CL:0002544;1.36e-08;6|ontology_enrichment_celltype_v019_2=CL:0002139,4.17e-32,24;CL:0000115,1.57e-28,36;CL:0000071,9.36e-24,18;CL:0002546,9.36e-24,18;CL:0002078,9.62e-21,45;CL:0000213,6.58e-14,58;CL:0000215,6.58e-14,58;CL:1000413,5.10e-12,9;CL:0005020,6.68e-10,6;CL:0002138,6.68e-10,6;CL:0005022,6.68e-10,6;CL:0002543,4.83e-09,6;CL:0002544,1.11e-08,6|ontology_enrichment_development_v019=CL:0002546;1.36e-23;18!CL:0005022;6.36e-10;6!UBERON:0004872;1.91e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.04e-58!115;UBERON:0001049!9.50e-23!57;UBERON:0005068!9.50e-23!57;UBERON:0006241!9.50e-23!57;UBERON:0007135!9.50e-23!57;UBERON:0004111!2.39e-21!241;UBERON:0000477!1.03e-18!286;UBERON:0001986!1.53e-18!18;UBERON:0004638!1.53e-18!18;UBERON:0004852!1.53e-18!18;UBERON:0002616!1.85e-18!59;UBERON:0000025!2.67e-17!194;UBERON:0003080!2.68e-17!42;UBERON:0003075!4.16e-17!86;UBERON:0007284!4.16e-17!86;UBERON:0001017!1.88e-16!82;UBERON:0002780!2.10e-16!41;UBERON:0001890!2.10e-16!41;UBERON:0006240!2.10e-16!41;UBERON:0005743!7.98e-16!86;UBERON:0000955!1.03e-15!69;UBERON:0006238!1.03e-15!69;UBERON:0002346!1.33e-15!90;UBERON:0000487!6.98e-14!22;UBERON:0000073!1.39e-13!94;UBERON:0001016!1.39e-13!94;UBERON:0002020!7.45e-13!34;UBERON:0003528!7.45e-13!34;UBERON:0001893!7.94e-13!34;UBERON:0002791!2.50e-12!33;UBERON:0001869!1.05e-11!32;UBERON:0006914!2.07e-11!25;UBERON:0000468!3.27e-11!659;UBERON:0003056!7.82e-11!61;UBERON:0000467!1.93e-10!625;UBERON:0001950!1.94e-10!20;UBERON:0000480!2.42e-10!626;UBERON:0002619!3.18e-10!22;UBERON:0000153!6.12e-10!129;UBERON:0007811!6.12e-10!129;UBERON:0000483!1.02e-09!309;UBERON:0003915!1.44e-09!9;UBERON:0004700!1.44e-09!9;UBERON:0001917!1.44e-09!9;UBERON:0000119!2.32e-09!312;UBERON:0000064!5.65e-09!219;UBERON:0004121!9.77e-09!169;UBERON:0000033!1.30e-08!123;UBERON:0000956!2.15e-08!25;UBERON:0000203!2.15e-08!25;UBERON:0003124!2.35e-08!7;UBERON:0000062!3.48e-08!511;UBERON:0000924!3.88e-08!173;UBERON:0006601!3.88e-08!173;UBERON:0005631!7.43e-08!14;UBERON:0000158!7.43e-08!14;UBERON:0002298!4.80e-07!8;UBERON:0000055!5.75e-07!69;UBERON:0002465!7.79e-07!10|ontology_enrichment_uberon_v019=UBERON:0004638;1.36e-23;18!UBERON:0001986;1.36e-23;18!UBERON:0004852;1.36e-23;18!UBERON:0000487;3.57e-18;22!UBERON:0006914;2.86e-15;25!UBERON:0007023;9.05e-13;114!UBERON:0003915;6.73e-12;9!UBERON:0004700;6.73e-12;9!UBERON:0001917;6.73e-12;9!UBERON:0000490;1.91e-09;33!UBERON:0002465;8.07e-09;10!UBERON:0001638;1.31e-07;9!UBERON:0003920;1.31e-07;9!UBERON:0004582;1.31e-07;9!UBERON:0001473;4.05e-07;8!UBERON:0004536;4.05e-07;8!UBERON:0006558;4.05e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.57e-46,114;UBERON:0004638,9.36e-24,18;UBERON:0001986,9.36e-24,18;UBERON:0004852,9.36e-24,18;UBERON:0000487,2.67e-18,22;UBERON:0004111,1.22e-16,240;UBERON:0006914,2.22e-15,25;UBERON:0000025,8.62e-14,192;UBERON:0003915,5.10e-12,9;UBERON:0004700,5.10e-12,9;UBERON:0001917,5.10e-12,9;UBERON:0000055,1.54e-11,68;UBERON:0003124,1.94e-10,7;UBERON:0001049,2.38e-10,56;UBERON:0005068,2.38e-10,56;UBERON:0006241,2.38e-10,56;UBERON:0007135,2.38e-10,56;UBERON:0004872,8.46e-10,83;UBERON:0002049,6.41e-09,78;UBERON:0007798,6.41e-09,78;UBERON:0002465,9.02e-09,10;UBERON:0005631,9.40e-09,14;UBERON:0000158,9.40e-09,14;UBERON:0000073,2.11e-08,53;UBERON:0002616,2.11e-08,53;UBERON:0003075,5.35e-08,82;UBERON:0007284,5.35e-08,82;UBERON:0007500,6.27e-08,59;UBERON:0001981,6.27e-08,59;UBERON:0004537,6.27e-08,59;UBERON:0006965,6.27e-08,59;UBERON:0001638,1.21e-07,9;UBERON:0003920,1.21e-07,9;UBERON:0004582,1.21e-07,9;UBERON:0002346,2.96e-07,86;UBERON:0001473,4.19e-07,8;UBERON:0004536,4.19e-07,8;UBERON:0006558,4.19e-07,8;UBERON:0000483,7.17e-07,306;UBERON:0001009,9.16e-07,112|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51267 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24355 | |||
|TSSclassifier=S | |||
|UniProt=Q8NC01 | |||
|association_with_transcript=0bp_to_ENST00000315330_5end | |||
|coexpression_cluster_id=C1653 | |||
|description=CAGE_peak_1_at_CLEC1A_5end | |||
|id=chr12:10251576..10251599,- | |||
|ontology_enrichment_celltype=CL:0002139!6.40e-25!24;CL:0000115!1.84e-20!35;CL:0000071!1.53e-18!18;CL:0002546!1.53e-18!18;CL:0002078!5.00e-14!44;CL:1000413!1.44e-09!9;CL:0000213!3.14e-09!57;CL:0000215!3.14e-09!57;CL:0005020!6.07e-08!6;CL:0002138!6.07e-08!6;CL:0005022!6.07e-08!6;CL:0002543!2.77e-07!6;CL:0002544!5.25e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.80e-32;24!CL:0000115;6.60e-24;36!CL:0000071;1.36e-23;18!CL:0002078;5.66e-14;45!CL:1000413;6.73e-12;9!CL:0002138;6.36e-10;6!CL:0000213;3.29e-09;58!CL:0000215;3.29e-09;58!CL:0002543;5.38e-09;6!CL:0002544;1.36e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.17e-32,24;CL:0000115,1.57e-28,36;CL:0000071,9.36e-24,18;CL:0002546,9.36e-24,18;CL:0002078,9.62e-21,45;CL:0000213,6.58e-14,58;CL:0000215,6.58e-14,58;CL:1000413,5.10e-12,9;CL:0005020,6.68e-10,6;CL:0002138,6.68e-10,6;CL:0005022,6.68e-10,6;CL:0002543,4.83e-09,6;CL:0002544,1.11e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.36e-23;18!CL:0005022;6.36e-10;6!UBERON:0004872;1.91e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.04e-58!115;UBERON:0001049!9.50e-23!57;UBERON:0005068!9.50e-23!57;UBERON:0006241!9.50e-23!57;UBERON:0007135!9.50e-23!57;UBERON:0004111!2.39e-21!241;UBERON:0000477!1.03e-18!286;UBERON:0001986!1.53e-18!18;UBERON:0004638!1.53e-18!18;UBERON:0004852!1.53e-18!18;UBERON:0002616!1.85e-18!59;UBERON:0000025!2.67e-17!194;UBERON:0003080!2.68e-17!42;UBERON:0003075!4.16e-17!86;UBERON:0007284!4.16e-17!86;UBERON:0001017!1.88e-16!82;UBERON:0002780!2.10e-16!41;UBERON:0001890!2.10e-16!41;UBERON:0006240!2.10e-16!41;UBERON:0005743!7.98e-16!86;UBERON:0000955!1.03e-15!69;UBERON:0006238!1.03e-15!69;UBERON:0002346!1.33e-15!90;UBERON:0000487!6.98e-14!22;UBERON:0000073!1.39e-13!94;UBERON:0001016!1.39e-13!94;UBERON:0002020!7.45e-13!34;UBERON:0003528!7.45e-13!34;UBERON:0001893!7.94e-13!34;UBERON:0002791!2.50e-12!33;UBERON:0001869!1.05e-11!32;UBERON:0006914!2.07e-11!25;UBERON:0000468!3.27e-11!659;UBERON:0003056!7.82e-11!61;UBERON:0000467!1.93e-10!625;UBERON:0001950!1.94e-10!20;UBERON:0000480!2.42e-10!626;UBERON:0002619!3.18e-10!22;UBERON:0000153!6.12e-10!129;UBERON:0007811!6.12e-10!129;UBERON:0000483!1.02e-09!309;UBERON:0003915!1.44e-09!9;UBERON:0004700!1.44e-09!9;UBERON:0001917!1.44e-09!9;UBERON:0000119!2.32e-09!312;UBERON:0000064!5.65e-09!219;UBERON:0004121!9.77e-09!169;UBERON:0000033!1.30e-08!123;UBERON:0000956!2.15e-08!25;UBERON:0000203!2.15e-08!25;UBERON:0003124!2.35e-08!7;UBERON:0000062!3.48e-08!511;UBERON:0000924!3.88e-08!173;UBERON:0006601!3.88e-08!173;UBERON:0005631!7.43e-08!14;UBERON:0000158!7.43e-08!14;UBERON:0002298!4.80e-07!8;UBERON:0000055!5.75e-07!69;UBERON:0002465!7.79e-07!10 | |||
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| |||
|short_description=p1@CLEC1A | |||
}} |
Revision as of 20:27, 10 September 2013
Short description: | p1@CLEC1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CLEC1A_5end |
Coexpression cluster: | C1653_choriocarcinoma_Endothelial_pancreatic_placenta_lung_Lymphatic_adipose |
Association with transcript: | 0bp_to_ENST00000315330_5end |
EntrezGene: | CLEC1A |
HGNC: | 24355 |
UniProt: | Q8NC01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.17e-32 | 24 |
endothelial cell | 1.57e-28 | 36 |
blood vessel endothelial cell | 9.36e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.36e-24 | 18 |
meso-epithelial cell | 9.62e-21 | 45 |
lining cell | 6.58e-14 | 58 |
barrier cell | 6.58e-14 | 58 |
endothelial cell of artery | 5.10e-12 | 9 |
lymphangioblast | 6.68e-10 | 6 |
endothelial cell of lymphatic vessel | 6.68e-10 | 6 |
vascular lymphangioblast | 6.68e-10 | 6 |
vein endothelial cell | 4.83e-09 | 6 |
aortic endothelial cell | 1.11e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.