FFCP PHASE1:Hg19::chr12:49412525..49412539,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5571|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9385|TSSclassifier=S|UniProt=F8VQQ1,F8VYZ8,F8VPF5,F8VVA3,F8VU55,B4DDT7,P54619|association_with_transcript=0bp_to_ENST00000547125,ENST00000548605,ENST00000548950,ENST00000551121,ENST00000551259,ENST00000552212,NM_001206710,uc010smd.1_5end|coexpression_cluster_id=C75|description=CAGE_peak_2_at_PRKAG1_5end|id=chr12:49412525..49412539,-|ontology_enrichment_celltype=CL:0000003!7.95e-26!722;CL:0002057!1.71e-24!42;CL:0000860!1.81e-24!45;CL:0000012!5.14e-24!682;CL:0000144!2.11e-23!625;CL:0000548!4.57e-23!679;CL:0000004!4.57e-23!679;CL:0000255!4.57e-23!679;CL:0002371!2.09e-19!591;CL:0000063!2.57e-19!578;CL:0000766!3.44e-18!76;CL:0000048!6.89e-18!430;CL:0000723!1.14e-17!436;CL:0000134!1.69e-17!358;CL:0002320!6.07e-17!365;CL:0000034!1.17e-16!444;CL:0000738!1.56e-16!140;CL:0000557!1.00e-15!71;CL:0000219!2.15e-15!390;CL:0000839!2.58e-15!70;CL:0002009!6.10e-15!65;CL:0002194!8.11e-15!63;CL:0000576!8.11e-15!63;CL:0000040!8.11e-15!63;CL:0000559!8.11e-15!63;CL:0002087!1.38e-13!119;CL:0002031!1.99e-13!124;CL:0000037!1.53e-12!172;CL:0000566!1.53e-12!172;CL:0000988!2.19e-12!182;CL:0000763!6.16e-11!112;CL:0000049!6.16e-11!112;CL:0002032!7.37e-11!165;CL:0000837!7.37e-11!165;CL:0002393!6.83e-07!9;CL:0002397!6.83e-07!9|ontology_enrichment_celltype_v019=CL:0000860;2.75e-18;33!CL:0002057;2.75e-18;33!CL:0000473;5.76e-13;39!CL:0000234;5.76e-13;39!CL:0000576;4.08e-12;48!CL:0000766;3.41e-10;69|ontology_enrichment_celltype_v019_2=CL:0000860,7.24e-25,42;CL:0002057,7.24e-25,42;CL:0000473,1.39e-21,48;CL:0000234,1.39e-21,48;CL:0000766,1.76e-18,72;CL:0000048,5.04e-17,427;CL:0000134,7.33e-17,354;CL:0000723,1.01e-16,433;CL:0002320,2.86e-16,361;CL:0000738,3.36e-16,136;CL:0000034,8.16e-16,441;CL:0000557,8.66e-16,67;CL:0000839,2.27e-15,66;CL:0002009,5.18e-15,61;CL:0002194,6.76e-15,59;CL:0000576,6.76e-15,59;CL:0000040,6.76e-15,59;CL:0000559,6.76e-15,59;CL:0000219,9.04e-15,386;CL:0002087,3.92e-13,115;CL:0002031,5.66e-13,120;CL:0000037,5.61e-12,168;CL:0000988,1.31e-11,177;CL:0000763,1.22e-10,108;CL:0000049,1.22e-10,108;CL:0002032,2.62e-10,161;CL:0000837,2.62e-10,161;CL:0002393,5.59e-07,9;CL:0002397,5.59e-07,9|ontology_enrichment_development_v019=CL:0002057;1.11e-18;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.14e-16!80;UBERON:0002384!3.02e-16!375;UBERON:0001474!7.34e-14!86;UBERON:0003081!8.01e-14!216;UBERON:0002390!2.46e-13!102;UBERON:0003061!2.46e-13!102;UBERON:0004765!9.46e-13!101;UBERON:0001434!9.46e-13!101;UBERON:0002193!9.55e-12!112;UBERON:0002204!3.61e-11!167;UBERON:0002405!7.87e-09!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.94e-16,76;UBERON:0002384,1.71e-15,371;UBERON:0003081,7.09e-15,203;UBERON:0001474,6.92e-14,82;UBERON:0004765,9.66e-14,90;UBERON:0002390,5.63e-13,98;UBERON:0003061,5.63e-13,98;UBERON:0001434,1.41e-12,100;UBERON:0002405,5.31e-12,93;UBERON:0002193,2.48e-11,108;UBERON:0002204,3.25e-11,167;UBERON:0000926,3.40e-07,315;UBERON:0004120,3.40e-07,315;UBERON:0006603,3.40e-07,315|phase1_expression=1.63510541343501,0.856402095563933,2.11431606143957,5.00366491765652,3.12872766099101,0.872338524100369,10.1319951267324,8.84407822797563,1.04474251279935,2.45733936501509,3.48900583986214,2.40285509343189,1.31883489114227,1.23766352960047,1.98838425436749,3.36162573225888,3.01347264011988,2.19093027116212,1.46379839637152,1.47745269692145,1.22400414746552,0.626909442956176,1.71741592278634,1.91624195102038,1.25542639594803,0.687720651731561,0.738905305049512,0.629686250509434,16.9146639045029,12.2825407391108,15.7912445782398,3.67768489791571,4.819294700452,3.69754010166788,1.16200800870452,1.42169232487422,2.34880351467878,14.9578760303607,11.4310335057981,14.7567392086779,1.56740831967947,0.647787332037959,0.257575567634187,4.9435401185052,6.42389104270976,9.46077838632483,6.97287110717054,9.86802931252382,10.8397229813286,6.04154023876516,9.47794614157672,11.1146648047635,4.82643953031266,6.45484683583826,10.8341189275473,6.77672422353377,7.36846605156184,6.06753408001728,8.26426509401437,4.49300637906531,5.11469700639233,4.94776950280074,8.97586459297343,11.5080682643827,9.57690487474327,9.64554881974938,6.85104473895132,5.7787193009051,7.30076085788282,8.25317609879443,4.84319602106695,6.99727508376373,7.91155968602211,9.50648788403738,7.86635909870661,8.17668717482666,12.6931353195539,5.85689882081875,4.018139667427,15.9607136495099,7.55883373356542,6.39324538176219,3.51992488922645,0.546138611262131,0,0.853460445133014,0.400395987036012,2.29900975981793,0.661044872784862,4.77026877267682,4.55370375287559,5.87237189370939,7.26319133437935,5.28685314316103,6.1655941927969,1.05353633910031,9.04864942523632,7.8602152549833,18.5041349099558,3.67810289859492,5.21475626613745,6.62826928028627,1.94826728407911,5.12488101671798,7.65975359434577,4.87374568083967,2.70803863765016,3.20228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3.67105056759701,3.04451029838529,1.85280868296583,1.75427239662966,2.29695889729645,4.05119480368921,2.87202149110224,1.28120759293973,4.49059444250558,2.43087964941906,0.414775308455192,0.584580926518165,1.46151324344699,1.14495775979091,1.96565909307848,3.93236654005951,1.69049698686902,1.59989916683944,1.60037594541211,3.2720846135555,2.27006381426734,5.52317850755522,0.979156554036111,3.11038630016486,2.42999305476938,1.40172254815686,4.08891448825331,1.63814457288021,2.20652288940233,0.637724760305049,1.98297222814403,1.67593475391973,0.318004350653419,0.788617450012533,0.80057074828547,2.1160556621441,1.2249819094128,0.642292250964595,0,0.638535436228605,1.43581454968528,0,0.691572524642179,0.161475645631851,0,1.57036349601641,2.00548529691159,1.46742878817343,3.46576998451015,1.1441462864015,0.690359926060101,1.79024599904647,0.601682626794058,3.0255760305528,1.56302802246618,0.261906694481422,1.14640342257068,1.77427303460454,0.810451015420736,0,0.620060389503552,1.20490039368423,0,1.09651553371436,1.98484471355718,1.75871244359621,1.53314913167514,0,0,1.82089681270989,1.59363533945908,1.06442844195167,0.576169937778896,1.8863681038116,0.747667062745149,0.328863867814245,1.30013224972365,1.33477682270483,0.313972371402056,0.314231179832004,2.80272163313789,0,1.07963795609311,0.47775168788705,0.428859265059938,0.632054446930906,0.929931402945002,1.04314963381548,1.60342272946051,1.03608082081518,0.6828739083758,1.38251932362818,1.72090943528111,1.30165200803622,2.55640214277473,0.846774100381858,1.14553434272025,1.24082554265728,0,2.34896406775364,1.17780280338292,2.31644057466312,1.29485767437579,1.12929087541872,0,0.971421986118279,1.63757624423474,2.78531085225916,0.951360726220549,1.46829906650648,0.989464650708862,1.20770274853339,1.08043821351123,0.437119121007915,0.470317296361523,0.490296643507811,0.942706188406504,0.981542335574726,0.297046400327086,1.2679671827502,1.52934403219035,0.939839179798536,0.966868319603658,1.19929387109915,2.67830907908486,4.58763333230399,1.84555143385087,0,0,0.573358332605805,0.631086248772738,0.543931921527318,0.872701380680755,1.5870805215462,1.48798007266701,3.23522940041993,1.73050624849516,1.00933139868063,1.20192129160065,3.54755802832024,1.73381010561369,0.801652215796681,2.57305718697566,0,1.28823786971007,0.803892390468535,0.829169439458779,0.20686599172379,0.639701945702943,1.1903221573187,1.22718928688412,0.993195428733726,2.57903283935411,0.636471582781649,0.404234377916439,1.52401723527873,1.36893320434112,1.14498490124799,0.932388670104793,0.665320713092027,0.651226148887796,1.81436487992116,0,4.31160970111617,0,1.4668973301944,1.22068853494722,0,0.402547587182052,1.9234109538194|short_description=p2@PRKAG1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5571 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9385 | |||
|TSSclassifier=S | |||
|UniProt=F8VQQ1,F8VYZ8,F8VPF5,F8VVA3,F8VU55,B4DDT7,P54619 | |||
|association_with_transcript=0bp_to_ENST00000547125,ENST00000548605,ENST00000548950,ENST00000551121,ENST00000551259,ENST00000552212,NM_001206710,uc010smd.1_5end | |||
|coexpression_cluster_id=C75 | |||
|description=CAGE_peak_2_at_PRKAG1_5end | |||
|id=chr12:49412525..49412539,- | |||
|ontology_enrichment_celltype=CL:0000003!7.95e-26!722;CL:0002057!1.71e-24!42;CL:0000860!1.81e-24!45;CL:0000012!5.14e-24!682;CL:0000144!2.11e-23!625;CL:0000548!4.57e-23!679;CL:0000004!4.57e-23!679;CL:0000255!4.57e-23!679;CL:0002371!2.09e-19!591;CL:0000063!2.57e-19!578;CL:0000766!3.44e-18!76;CL:0000048!6.89e-18!430;CL:0000723!1.14e-17!436;CL:0000134!1.69e-17!358;CL:0002320!6.07e-17!365;CL:0000034!1.17e-16!444;CL:0000738!1.56e-16!140;CL:0000557!1.00e-15!71;CL:0000219!2.15e-15!390;CL:0000839!2.58e-15!70;CL:0002009!6.10e-15!65;CL:0002194!8.11e-15!63;CL:0000576!8.11e-15!63;CL:0000040!8.11e-15!63;CL:0000559!8.11e-15!63;CL:0002087!1.38e-13!119;CL:0002031!1.99e-13!124;CL:0000037!1.53e-12!172;CL:0000566!1.53e-12!172;CL:0000988!2.19e-12!182;CL:0000763!6.16e-11!112;CL:0000049!6.16e-11!112;CL:0002032!7.37e-11!165;CL:0000837!7.37e-11!165;CL:0002393!6.83e-07!9;CL:0002397!6.83e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.75e-18;33!CL:0002057;2.75e-18;33!CL:0000473;5.76e-13;39!CL:0000234;5.76e-13;39!CL:0000576;4.08e-12;48!CL:0000766;3.41e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.24e-25,42;CL:0002057,7.24e-25,42;CL:0000473,1.39e-21,48;CL:0000234,1.39e-21,48;CL:0000766,1.76e-18,72;CL:0000048,5.04e-17,427;CL:0000134,7.33e-17,354;CL:0000723,1.01e-16,433;CL:0002320,2.86e-16,361;CL:0000738,3.36e-16,136;CL:0000034,8.16e-16,441;CL:0000557,8.66e-16,67;CL:0000839,2.27e-15,66;CL:0002009,5.18e-15,61;CL:0002194,6.76e-15,59;CL:0000576,6.76e-15,59;CL:0000040,6.76e-15,59;CL:0000559,6.76e-15,59;CL:0000219,9.04e-15,386;CL:0002087,3.92e-13,115;CL:0002031,5.66e-13,120;CL:0000037,5.61e-12,168;CL:0000988,1.31e-11,177;CL:0000763,1.22e-10,108;CL:0000049,1.22e-10,108;CL:0002032,2.62e-10,161;CL:0000837,2.62e-10,161;CL:0002393,5.59e-07,9;CL:0002397,5.59e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.14e-16!80;UBERON:0002384!3.02e-16!375;UBERON:0001474!7.34e-14!86;UBERON:0003081!8.01e-14!216;UBERON:0002390!2.46e-13!102;UBERON:0003061!2.46e-13!102;UBERON:0004765!9.46e-13!101;UBERON:0001434!9.46e-13!101;UBERON:0002193!9.55e-12!112;UBERON:0002204!3.61e-11!167;UBERON:0002405!7.87e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.94e-16,76;UBERON:0002384,1.71e-15,371;UBERON:0003081,7.09e-15,203;UBERON:0001474,6.92e-14,82;UBERON:0004765,9.66e-14,90;UBERON:0002390,5.63e-13,98;UBERON:0003061,5.63e-13,98;UBERON:0001434,1.41e-12,100;UBERON:0002405,5.31e-12,93;UBERON:0002193,2.48e-11,108;UBERON:0002204,3.25e-11,167;UBERON:0000926,3.40e-07,315;UBERON:0004120,3.40e-07,315;UBERON:0006603,3.40e-07,315 | |||
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| |||
|short_description=p2@PRKAG1 | |||
}} |
Revision as of 22:52, 10 September 2013
Short description: | p2@PRKAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PRKAG1_5end |
Coexpression cluster: | C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral |
Association with transcript: | 0bp_to_ENST00000547125, ENST00000548605, ENST00000548950, ENST00000551121, ENST00000551259, ENST00000552212, NM_001206710, uc010smd.1_5end |
EntrezGene: | PRKAG1 |
HGNC: | 9385 |
UniProt: | F8VQQ1F8VYZ8F8VPF5F8VVA3F8VU55B4DDT7P54619 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.24e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.24e-25 | 42 |
defensive cell | 1.39e-21 | 48 |
phagocyte | 1.39e-21 | 48 |
myeloid leukocyte | 1.76e-18 | 72 |
multi fate stem cell | 5.04e-17 | 427 |
mesenchymal cell | 7.33e-17 | 354 |
somatic stem cell | 1.01e-16 | 433 |
connective tissue cell | 2.86e-16 | 361 |
leukocyte | 3.36e-16 | 136 |
stem cell | 8.16e-16 | 441 |
granulocyte monocyte progenitor cell | 8.66e-16 | 67 |
myeloid lineage restricted progenitor cell | 2.27e-15 | 66 |
macrophage dendritic cell progenitor | 5.18e-15 | 61 |
monopoietic cell | 6.76e-15 | 59 |
monocyte | 6.76e-15 | 59 |
monoblast | 6.76e-15 | 59 |
promonocyte | 6.76e-15 | 59 |
motile cell | 9.04e-15 | 386 |
nongranular leukocyte | 3.92e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 5.66e-13 | 120 |
hematopoietic stem cell | 5.61e-12 | 168 |
hematopoietic cell | 1.31e-11 | 177 |
myeloid cell | 1.22e-10 | 108 |
common myeloid progenitor | 1.22e-10 | 108 |
hematopoietic oligopotent progenitor cell | 2.62e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.62e-10 | 161 |
intermediate monocyte | 5.59e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.59e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.94e-16 | 76 |
connective tissue | 1.71e-15 | 371 |
lateral plate mesoderm | 7.09e-15 | 203 |
bone element | 6.92e-14 | 82 |
skeletal element | 9.66e-14 | 90 |
hematopoietic system | 5.63e-13 | 98 |
blood island | 5.63e-13 | 98 |
skeletal system | 1.41e-12 | 100 |
immune system | 5.31e-12 | 93 |
hemolymphoid system | 2.48e-11 | 108 |
musculoskeletal system | 3.25e-11 | 167 |
mesoderm | 3.40e-07 | 315 |
mesoderm-derived structure | 3.40e-07 | 315 |
presumptive mesoderm | 3.40e-07 | 315 |
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