FFCP PHASE1:Hg19::chr12:52910971..52910983,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C207|description=CAGE_peak_at_chr12:52910971..52910983,+|id=chr12:52910971..52910983,+|ontology_enrichment_celltype=CL:0002076!3.66e-31!43;CL:0002368!1.94e-25!13;CL:0000223!3.09e-21!59;CL:0002159!2.66e-17!13;CL:0000066!3.95e-17!254;CL:0002202!2.71e-14!9;CL:0002632!2.71e-14!9;CL:0002251!2.74e-12!21;CL:0002328!8.66e-12!3;CL:0000068!9.66e-12!3;CL:0000069!9.66e-12!3;CL:0000307!9.66e-12!3;CL:0000377!9.66e-12!3;CL:0002621!3.73e-11!3;CL:0000240!1.32e-10!6;CL:0000311!1.32e-10!6;CL:0000079!1.32e-10!6;CL:0000237!1.32e-10!6;CL:0000036!1.32e-10!6;CL:0000357!1.32e-10!6;CL:0000114!1.32e-10!6;CL:0002077!3.38e-09!33;CL:0000244!4.08e-09!4;CL:0000731!4.08e-09!4;CL:0002327!5.94e-09!4;CL:0000575!9.59e-09!2;CL:0000076!4.59e-08!62;CL:0000362!8.64e-08!8;CL:0000312!1.41e-07!5;CL:0000622!3.53e-07!5;CL:0000220!5.59e-07!246;CL:0002321!7.24e-07!248|ontology_enrichment_celltype_v019=CL:0000240;3.99e-27;6!CL:0000311;3.99e-27;6!CL:0000079;3.99e-27;6!CL:0000237;3.99e-27;6!CL:0000575;5.75e-21;2!CL:0000312;1.03e-18;5!CL:0002202;5.10e-18;9!CL:0002632;5.10e-18;9!CL:0002159;7.85e-18;14!CL:0000307;1.41e-14;3!CL:0002328;4.72e-14;3!CL:0002623;4.72e-14;3!CL:0002368;1.49e-12;13!CL:0002336;1.45e-11;1!CL:0002261;1.45e-11;1!CL:0002170;1.45e-11;1!CL:0000244;2.30e-11;4!CL:0000731;2.30e-11;4!CL:0002252;3.63e-11;1!CL:0002076;8.90e-11;42!CL:0002327;8.96e-11;4!CL:0000362;1.17e-10;9!CL:0000622;8.50e-09;5!CL:0002251;3.76e-08;20!CL:0000154;1.80e-07;6!CL:0002077;3.53e-07;34|ontology_enrichment_celltype_v019_2=CL:0000240,2.50e-27,6;CL:0000311,2.50e-27,6;CL:0000079,2.50e-27,6;CL:0000237,2.50e-27,6;CL:0000036,2.50e-27,6;CL:0000357,2.50e-27,6;CL:0000114,2.50e-27,6;CL:0000575,3.84e-21,2;CL:0000312,5.97e-19,5;CL:0002159,4.96e-18,14;CL:0002202,6.65e-18,9;CL:0002632,6.65e-18,9;CL:0000068,1.85e-14,3;CL:0000069,1.85e-14,3;CL:0000307,1.85e-14,3;CL:0000377,1.85e-14,3;CL:0002076,3.96e-14,42;CL:0002328,5.40e-14,3;CL:0002623,5.77e-14,3;CL:0002368,1.78e-12,13;CL:0002336,1.78e-11,1;CL:0002261,1.78e-11,1;CL:0002170,1.78e-11,1;CL:0000244,2.30e-11,4;CL:0000731,2.30e-11,4;CL:0002252,2.96e-11,1;CL:0000362,8.72e-11,9;CL:0002327,1.09e-10,4;CL:0000066,3.51e-10,253;CL:0000223,5.66e-10,58;CL:0000622,9.57e-09,5;CL:0002251,3.98e-08,20;CL:0000154,1.98e-07,6;CL:0002077,2.38e-07,34|ontology_enrichment_development_v019=CL:0000357;3.99e-27;6!CL:0000114;3.99e-27;6!CL:0000377;1.41e-14;3!UBERON:0000358;1.45e-11;1!CL:0000223;1.62e-07;58|ontology_enrichment_disease=DOID:1749!5.06e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!1.88e-14!72;UBERON:0004815!8.66e-12!3;UBERON:0002031!8.66e-12!3;UBERON:0007196!9.14e-12!14;UBERON:0001558!9.14e-12!14;UBERON:0001949!3.73e-11!3;UBERON:0004119!2.79e-10!169;UBERON:0000925!2.79e-10!169;UBERON:0006595!2.79e-10!169;UBERON:0000166!1.37e-09!21;UBERON:0001911!5.94e-09!4;UBERON:0005333!5.94e-09!4;UBERON:0008425!5.94e-09!4;UBERON:0005311!5.94e-09!4;UBERON:0002185!6.11e-09!4;UBERON:0000165!9.01e-09!28;UBERON:0000930!9.01e-09!28;UBERON:0003126!2.53e-08!7;UBERON:0001005!2.53e-08!7;UBERON:0000065!2.99e-08!53;UBERON:0000161!3.67e-08!35;UBERON:0003102!5.24e-08!95;UBERON:0000365!2.31e-07!5;UBERON:0003729!5.59e-07!5;UBERON:0005178!6.32e-07!34;UBERON:0002224!6.32e-07!34;UBERON:0001444!7.01e-07!48|ontology_enrichment_uberon_v019=UBERON:0004815;4.72e-14;3!UBERON:0002031;4.72e-14;3!UBERON:0000964;5.72e-11;4!UBERON:0010409;5.72e-11;4!UBERON:0007196;6.58e-11;15!UBERON:0001558;6.58e-11;15!UBERON:0001911;8.96e-11;4!UBERON:0000365;2.88e-09;5!UBERON:0002185;8.50e-09;5!UBERON:0005910;7.31e-08;6!UBERON:0001044;1.80e-07;6!UBERON:0003293;1.80e-07;6!UBERON:0003294;1.80e-07;6!UBERON:0010047;1.80e-07;6!UBERON:0003408;1.80e-07;6!UBERON:0000167;1.80e-07;6!UBERON:0005178;2.15e-07;34!UBERON:0002224;2.15e-07;34!UBERON:0001041;7.27e-07;14!UBERON:0003126;9.65e-07;7!UBERON:0001005;9.65e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0004815,5.40e-14,3;UBERON:0002031,5.40e-14,3;UBERON:0000964,4.68e-11,4;UBERON:0010409,4.68e-11,4;UBERON:0004348,4.68e-11,4;UBERON:0005427,4.68e-11,4;UBERON:0007196,7.69e-11,15;UBERON:0001558,7.69e-11,15;UBERON:0001911,1.09e-10,4;UBERON:0005333,1.09e-10,4;UBERON:0008425,1.09e-10,4;UBERON:0005311,1.09e-10,4;UBERON:0000365,2.88e-09,5;UBERON:0002185,9.20e-09,5;UBERON:0005910,7.32e-08,6;UBERON:0001044,1.98e-07,6;UBERON:0003293,1.98e-07,6;UBERON:0003294,1.98e-07,6;UBERON:0010047,1.98e-07,6;UBERON:0000167,1.98e-07,6;UBERON:0005178,3.40e-07,34;UBERON:0002224,3.40e-07,34;UBERON:0005157,3.79e-07,47;UBERON:0004119,4.75e-07,160;UBERON:0000925,4.75e-07,160;UBERON:0006595,4.75e-07,160;UBERON:0005181,5.51e-07,35;UBERON:0003102,5.69e-07,99;UBERON:0001444,7.16e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.8072355126695,1.10926203050036,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52910971..52910983,+ | |||
|id=chr12:52910971..52910983,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.66e-31!43;CL:0002368!1.94e-25!13;CL:0000223!3.09e-21!59;CL:0002159!2.66e-17!13;CL:0000066!3.95e-17!254;CL:0002202!2.71e-14!9;CL:0002632!2.71e-14!9;CL:0002251!2.74e-12!21;CL:0002328!8.66e-12!3;CL:0000068!9.66e-12!3;CL:0000069!9.66e-12!3;CL:0000307!9.66e-12!3;CL:0000377!9.66e-12!3;CL:0002621!3.73e-11!3;CL:0000240!1.32e-10!6;CL:0000311!1.32e-10!6;CL:0000079!1.32e-10!6;CL:0000237!1.32e-10!6;CL:0000036!1.32e-10!6;CL:0000357!1.32e-10!6;CL:0000114!1.32e-10!6;CL:0002077!3.38e-09!33;CL:0000244!4.08e-09!4;CL:0000731!4.08e-09!4;CL:0002327!5.94e-09!4;CL:0000575!9.59e-09!2;CL:0000076!4.59e-08!62;CL:0000362!8.64e-08!8;CL:0000312!1.41e-07!5;CL:0000622!3.53e-07!5;CL:0000220!5.59e-07!246;CL:0002321!7.24e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000240;3.99e-27;6!CL:0000311;3.99e-27;6!CL:0000079;3.99e-27;6!CL:0000237;3.99e-27;6!CL:0000575;5.75e-21;2!CL:0000312;1.03e-18;5!CL:0002202;5.10e-18;9!CL:0002632;5.10e-18;9!CL:0002159;7.85e-18;14!CL:0000307;1.41e-14;3!CL:0002328;4.72e-14;3!CL:0002623;4.72e-14;3!CL:0002368;1.49e-12;13!CL:0002336;1.45e-11;1!CL:0002261;1.45e-11;1!CL:0002170;1.45e-11;1!CL:0000244;2.30e-11;4!CL:0000731;2.30e-11;4!CL:0002252;3.63e-11;1!CL:0002076;8.90e-11;42!CL:0002327;8.96e-11;4!CL:0000362;1.17e-10;9!CL:0000622;8.50e-09;5!CL:0002251;3.76e-08;20!CL:0000154;1.80e-07;6!CL:0002077;3.53e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000240,2.50e-27,6;CL:0000311,2.50e-27,6;CL:0000079,2.50e-27,6;CL:0000237,2.50e-27,6;CL:0000036,2.50e-27,6;CL:0000357,2.50e-27,6;CL:0000114,2.50e-27,6;CL:0000575,3.84e-21,2;CL:0000312,5.97e-19,5;CL:0002159,4.96e-18,14;CL:0002202,6.65e-18,9;CL:0002632,6.65e-18,9;CL:0000068,1.85e-14,3;CL:0000069,1.85e-14,3;CL:0000307,1.85e-14,3;CL:0000377,1.85e-14,3;CL:0002076,3.96e-14,42;CL:0002328,5.40e-14,3;CL:0002623,5.77e-14,3;CL:0002368,1.78e-12,13;CL:0002336,1.78e-11,1;CL:0002261,1.78e-11,1;CL:0002170,1.78e-11,1;CL:0000244,2.30e-11,4;CL:0000731,2.30e-11,4;CL:0002252,2.96e-11,1;CL:0000362,8.72e-11,9;CL:0002327,1.09e-10,4;CL:0000066,3.51e-10,253;CL:0000223,5.66e-10,58;CL:0000622,9.57e-09,5;CL:0002251,3.98e-08,20;CL:0000154,1.98e-07,6;CL:0002077,2.38e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;3.99e-27;6!CL:0000114;3.99e-27;6!CL:0000377;1.41e-14;3!UBERON:0000358;1.45e-11;1!CL:0000223;1.62e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!5.06e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.88e-14!72;UBERON:0004815!8.66e-12!3;UBERON:0002031!8.66e-12!3;UBERON:0007196!9.14e-12!14;UBERON:0001558!9.14e-12!14;UBERON:0001949!3.73e-11!3;UBERON:0004119!2.79e-10!169;UBERON:0000925!2.79e-10!169;UBERON:0006595!2.79e-10!169;UBERON:0000166!1.37e-09!21;UBERON:0001911!5.94e-09!4;UBERON:0005333!5.94e-09!4;UBERON:0008425!5.94e-09!4;UBERON:0005311!5.94e-09!4;UBERON:0002185!6.11e-09!4;UBERON:0000165!9.01e-09!28;UBERON:0000930!9.01e-09!28;UBERON:0003126!2.53e-08!7;UBERON:0001005!2.53e-08!7;UBERON:0000065!2.99e-08!53;UBERON:0000161!3.67e-08!35;UBERON:0003102!5.24e-08!95;UBERON:0000365!2.31e-07!5;UBERON:0003729!5.59e-07!5;UBERON:0005178!6.32e-07!34;UBERON:0002224!6.32e-07!34;UBERON:0001444!7.01e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.72e-14;3!UBERON:0002031;4.72e-14;3!UBERON:0000964;5.72e-11;4!UBERON:0010409;5.72e-11;4!UBERON:0007196;6.58e-11;15!UBERON:0001558;6.58e-11;15!UBERON:0001911;8.96e-11;4!UBERON:0000365;2.88e-09;5!UBERON:0002185;8.50e-09;5!UBERON:0005910;7.31e-08;6!UBERON:0001044;1.80e-07;6!UBERON:0003293;1.80e-07;6!UBERON:0003294;1.80e-07;6!UBERON:0010047;1.80e-07;6!UBERON:0003408;1.80e-07;6!UBERON:0000167;1.80e-07;6!UBERON:0005178;2.15e-07;34!UBERON:0002224;2.15e-07;34!UBERON:0001041;7.27e-07;14!UBERON:0003126;9.65e-07;7!UBERON:0001005;9.65e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,5.40e-14,3;UBERON:0002031,5.40e-14,3;UBERON:0000964,4.68e-11,4;UBERON:0010409,4.68e-11,4;UBERON:0004348,4.68e-11,4;UBERON:0005427,4.68e-11,4;UBERON:0007196,7.69e-11,15;UBERON:0001558,7.69e-11,15;UBERON:0001911,1.09e-10,4;UBERON:0005333,1.09e-10,4;UBERON:0008425,1.09e-10,4;UBERON:0005311,1.09e-10,4;UBERON:0000365,2.88e-09,5;UBERON:0002185,9.20e-09,5;UBERON:0005910,7.32e-08,6;UBERON:0001044,1.98e-07,6;UBERON:0003293,1.98e-07,6;UBERON:0003294,1.98e-07,6;UBERON:0010047,1.98e-07,6;UBERON:0000167,1.98e-07,6;UBERON:0005178,3.40e-07,34;UBERON:0002224,3.40e-07,34;UBERON:0005157,3.79e-07,47;UBERON:0004119,4.75e-07,160;UBERON:0000925,4.75e-07,160;UBERON:0006595,4.75e-07,160;UBERON:0005181,5.51e-07,35;UBERON:0003102,5.69e-07,99;UBERON:0001444,7.16e-07,49 | |||
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|short_description=p@chr12:52910971..52910983,+ | |||
}} |
Revision as of 23:11, 10 September 2013
Short description: | p@chr12:52910971..52910983, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:52910971..52910983, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 5.40e-14 | 3 |
epithelium of bronchus | 5.40e-14 | 3 |
cornea | 4.68e-11 | 4 |
eye surface | 4.68e-11 | 4 |
optic eminence | 4.68e-11 | 4 |
corneal primordium | 4.68e-11 | 4 |
tracheobronchial tree | 7.69e-11 | 15 |
lower respiratory tract | 7.69e-11 | 15 |
mammary gland | 1.09e-10 | 4 |
mammary bud | 1.09e-10 | 4 |
mammary ridge | 1.09e-10 | 4 |
mammary placode | 1.09e-10 | 4 |
urothelium | 2.88e-09 | 5 |
bronchus | 9.20e-09 | 5 |
transitional epithelium | 7.32e-08 | 6 |
saliva-secreting gland | 1.98e-07 | 6 |
gland of oral region | 1.98e-07 | 6 |
gland of foregut | 1.98e-07 | 6 |
oral gland | 1.98e-07 | 6 |
oral cavity | 1.98e-07 | 6 |
thoracic cavity element | 3.40e-07 | 34 |
thoracic cavity | 3.40e-07 | 34 |
epithelial fold | 3.79e-07 | 47 |
endoderm-derived structure | 4.75e-07 | 160 |
endoderm | 4.75e-07 | 160 |
presumptive endoderm | 4.75e-07 | 160 |
thoracic segment organ | 5.51e-07 | 35 |
surface structure | 5.69e-07 | 99 |
subdivision of head | 7.16e-07 | 49 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.