FFCP PHASE1:Hg19::chr12:75893364..75893376,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=73bp_to_U00943_5end|coexpression_cluster_id=C3333|description=CAGE_peak_2_at_U00943_5end|id=chr12:75893364..75893376,+|ontology_enrichment_celltype=CL:0000048!6.71e-23!430;CL:0000723!9.68e-22!436;CL:0002320!3.46e-20!365;CL:0000034!4.91e-20!444;CL:0000134!7.07e-20!358;CL:0002057!1.77e-18!42;CL:0002194!1.32e-17!63;CL:0000576!1.32e-17!63;CL:0000040!1.32e-17!63;CL:0000559!1.32e-17!63;CL:0002009!1.92e-17!65;CL:0000219!5.74e-17!390;CL:0000766!1.45e-16!76;CL:0002371!1.51e-16!591;CL:0000860!7.02e-16!45;CL:0000144!8.09e-16!625;CL:0000557!6.77e-14!71;CL:0000839!1.93e-13!70;CL:0000003!3.15e-11!722;CL:0000738!1.10e-10!140;CL:0002087!2.26e-10!119;CL:0000548!3.40e-10!679;CL:0000004!3.40e-10!679;CL:0000255!3.40e-10!679;CL:0000012!1.12e-09!682;CL:0002031!4.58e-08!124;CL:0000763!8.24e-08!112;CL:0000049!8.24e-08!112;CL:0000057!2.76e-07!75;CL:0000055!7.30e-07!180|ontology_enrichment_celltype_v019=CL:0000860;1.71e-23;33!CL:0002057;1.71e-23;33!CL:0000473;1.54e-21;39!CL:0000234;1.54e-21;39!CL:0000576;7.90e-12;48!CL:0000766;4.36e-10;69|ontology_enrichment_celltype_v019_2=CL:0000473,1.55e-27,48;CL:0000234,1.55e-27,48;CL:0000860,5.48e-25,42;CL:0002057,5.48e-25,42;CL:0002009,2.11e-22,61;CL:0002194,3.92e-22,59;CL:0000576,3.92e-22,59;CL:0000040,3.92e-22,59;CL:0000559,3.92e-22,59;CL:0000766,3.21e-21,72;CL:0000557,2.92e-19,67;CL:0000839,1.76e-18,66;CL:0000048,2.38e-18,427;CL:0000723,1.34e-17,433;CL:0000034,1.24e-16,441;CL:0000134,8.88e-16,354;CL:0002320,1.95e-15,361;CL:0000219,2.41e-12,386;CL:0000763,7.33e-12,108;CL:0000049,7.33e-12,108;CL:0002087,4.59e-08,115;CL:0000738,5.11e-08,136;CL:0002031,7.21e-08,120|ontology_enrichment_development_v019=CL:0002057;2.43e-17;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.49e-20!375;UBERON:0002204!3.18e-18!167;UBERON:0004765!3.62e-15!101;UBERON:0001434!3.62e-15!101;UBERON:0002371!8.52e-15!80;UBERON:0001474!7.40e-14!86;UBERON:0002390!1.10e-13!102;UBERON:0003061!1.10e-13!102;UBERON:0002193!1.38e-10!112;UBERON:0003081!5.53e-09!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-20,76;UBERON:0001474,5.79e-19,82;UBERON:0002204,5.98e-19,167;UBERON:0004765,3.37e-18,90;UBERON:0001434,1.90e-17,100;UBERON:0002390,6.64e-17,98;UBERON:0003061,6.64e-17,98;UBERON:0002384,5.33e-16,371;UBERON:0002405,6.67e-15,93;UBERON:0002193,5.18e-14,108;UBERON:0003081,8.82e-12,203;UBERON:0000926,1.86e-11,315;UBERON:0004120,1.86e-11,315;UBERON:0006603,1.86e-11,315|phase1_expression=0.54503513781167,2.35510576280081,0.704772020479856,1.0007329835313,0.893922188854576,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0.37129905888014,0.662794751455832,4.03395087871065,1.80808358407193,4.38186054232424,2.43966399395253,0.123121058076788,0,0,0.572471974262113,2.05311637609326,0.251085279189606,0.152826811495903,0,0,0.393364276848904,0.383829398097213,1.85779347979291,0,0,0,0.232401601740905,0.284338464974843,0,0.553995408531877,1.20326668482085,1.95309783644267,0.223915474239924,0.32389366601898,0.257575567634187,2.18097358169347,1.88937971844405,2.18325655069035,1.62700325833979,4.52284676824008,1.85823822537062,0.575384784644301,1.7931249457037,1.41889337933151,2.75796544589295,1.93645405075148,1.35426486594342,2.63539275359647,0.545812300115692,1.79778787556068,2.44867113896722,2.88836124368484,2.55734850319616,0,1.59570926097305,2.98357325372886,3.77272010217159,1.70215567407342,5.60540024096017,1.7587406567972,5.73631210262222,0.434377689410233,4.23779651843358,2.94622108790052,3.79754864929061,0.845021145247767,1.70083439972035,0.838634582033504,2.13424399178341,1.95229960693958,5.78612112109488,0,0.79566670879636,1.0959849225878,0,1.63841583378639,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0,1.14681968437569,0,0,0,0.590129310341499,0.393010762749165,1.85041349099558,0,0,0,0,1.22551502573691,0.294605907474837,0.221533894583621,2.16643091012012,0.768547918354051,1.43065282315866,0.493313713811028,1.10540007114339,0.289803085735052,0,0,0,0.339928028092699,0,0,1.26509846009751,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0.821127996921047,0.403213486449465,0.534880391567015,0.289648807765598,0,0.670700859703636,0.255725123687061,3.97583067623023,0,2.462390822334,0,0.486634870302636,1.13441780596881,0.443458794925128,1.05401742831751,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,2.39324328933957,1.19245312152671,0.571994910780128,0.371457501329565,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,3.87780264148325,0,1.49091585508596,2.27934920996244,4.8991396900891,1.43418310374407,2.4826786753885,1.12135520028461,0,0,0,0.404132016209064,0.163461903113459,0,0,0,0.312160076830321,0,1.79338416662161,0.117434498643765,0.161872944368132,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=73bp_to_U00943_5end | |||
|coexpression_cluster_id=C3333 | |||
|description=CAGE_peak_2_at_U00943_5end | |||
|id=chr12:75893364..75893376,+ | |||
|ontology_enrichment_celltype=CL:0000048!6.71e-23!430;CL:0000723!9.68e-22!436;CL:0002320!3.46e-20!365;CL:0000034!4.91e-20!444;CL:0000134!7.07e-20!358;CL:0002057!1.77e-18!42;CL:0002194!1.32e-17!63;CL:0000576!1.32e-17!63;CL:0000040!1.32e-17!63;CL:0000559!1.32e-17!63;CL:0002009!1.92e-17!65;CL:0000219!5.74e-17!390;CL:0000766!1.45e-16!76;CL:0002371!1.51e-16!591;CL:0000860!7.02e-16!45;CL:0000144!8.09e-16!625;CL:0000557!6.77e-14!71;CL:0000839!1.93e-13!70;CL:0000003!3.15e-11!722;CL:0000738!1.10e-10!140;CL:0002087!2.26e-10!119;CL:0000548!3.40e-10!679;CL:0000004!3.40e-10!679;CL:0000255!3.40e-10!679;CL:0000012!1.12e-09!682;CL:0002031!4.58e-08!124;CL:0000763!8.24e-08!112;CL:0000049!8.24e-08!112;CL:0000057!2.76e-07!75;CL:0000055!7.30e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-23;33!CL:0002057;1.71e-23;33!CL:0000473;1.54e-21;39!CL:0000234;1.54e-21;39!CL:0000576;7.90e-12;48!CL:0000766;4.36e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.55e-27,48;CL:0000234,1.55e-27,48;CL:0000860,5.48e-25,42;CL:0002057,5.48e-25,42;CL:0002009,2.11e-22,61;CL:0002194,3.92e-22,59;CL:0000576,3.92e-22,59;CL:0000040,3.92e-22,59;CL:0000559,3.92e-22,59;CL:0000766,3.21e-21,72;CL:0000557,2.92e-19,67;CL:0000839,1.76e-18,66;CL:0000048,2.38e-18,427;CL:0000723,1.34e-17,433;CL:0000034,1.24e-16,441;CL:0000134,8.88e-16,354;CL:0002320,1.95e-15,361;CL:0000219,2.41e-12,386;CL:0000763,7.33e-12,108;CL:0000049,7.33e-12,108;CL:0002087,4.59e-08,115;CL:0000738,5.11e-08,136;CL:0002031,7.21e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.43e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.49e-20!375;UBERON:0002204!3.18e-18!167;UBERON:0004765!3.62e-15!101;UBERON:0001434!3.62e-15!101;UBERON:0002371!8.52e-15!80;UBERON:0001474!7.40e-14!86;UBERON:0002390!1.10e-13!102;UBERON:0003061!1.10e-13!102;UBERON:0002193!1.38e-10!112;UBERON:0003081!5.53e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-20,76;UBERON:0001474,5.79e-19,82;UBERON:0002204,5.98e-19,167;UBERON:0004765,3.37e-18,90;UBERON:0001434,1.90e-17,100;UBERON:0002390,6.64e-17,98;UBERON:0003061,6.64e-17,98;UBERON:0002384,5.33e-16,371;UBERON:0002405,6.67e-15,93;UBERON:0002193,5.18e-14,108;UBERON:0003081,8.82e-12,203;UBERON:0000926,1.86e-11,315;UBERON:0004120,1.86e-11,315;UBERON:0006603,1.86e-11,315 | |||
|phase1_expression=0.54503513781167,2.35510576280081,0.704772020479856,1.0007329835313,0.893922188854576,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0.37129905888014,0.662794751455832,4.03395087871065,1.80808358407193,4.38186054232424,2.43966399395253,0.123121058076788,0,0,0.572471974262113,2.05311637609326,0.251085279189606,0.152826811495903,0,0,0.393364276848904,0.383829398097213,1.85779347979291,0,0,0,0.232401601740905,0.284338464974843,0,0.553995408531877,1.20326668482085,1.95309783644267,0.223915474239924,0.32389366601898,0.257575567634187,2.18097358169347,1.88937971844405,2.18325655069035,1.62700325833979,4.52284676824008,1.85823822537062,0.575384784644301,1.7931249457037,1.41889337933151,2.75796544589295,1.93645405075148,1.35426486594342,2.63539275359647,0.545812300115692,1.79778787556068,2.44867113896722,2.88836124368484,2.55734850319616,0,1.59570926097305,2.98357325372886,3.77272010217159,1.70215567407342,5.60540024096017,1.7587406567972,5.73631210262222,0.434377689410233,4.23779651843358,2.94622108790052,3.79754864929061,0.845021145247767,1.70083439972035,0.838634582033504,2.13424399178341,1.95229960693958,5.78612112109488,0,0.79566670879636,1.0959849225878,0,1.63841583378639,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0,1.14681968437569,0,0,0,0.590129310341499,0.393010762749165,1.85041349099558,0,0,0,0,1.22551502573691,0.294605907474837,0.221533894583621,2.16643091012012,0.768547918354051,1.43065282315866,0.493313713811028,1.10540007114339,0.289803085735052,0,0,0,0.339928028092699,0,0,1.26509846009751,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0.821127996921047,0.403213486449465,0.534880391567015,0.289648807765598,0,0.670700859703636,0.255725123687061,3.97583067623023,0,2.462390822334,0,0.486634870302636,1.13441780596881,0.443458794925128,1.05401742831751,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,2.39324328933957,1.19245312152671,0.571994910780128,0.371457501329565,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,3.87780264148325,0,1.49091585508596,2.27934920996244,4.8991396900891,1.43418310374407,2.4826786753885,1.12135520028461,0,0,0,0.404132016209064,0.163461903113459,0,0,0,0.312160076830321,0,1.79338416662161,0.117434498643765,0.161872944368132,0,1.42907919878425,0.61417158655884,0.103325781175765,0,1.7308685049499,0.910161361938026,0,0,0.125118519871964,0.554128230968366,0.438977620880838,1.22595118319608,1.20190447125277,0.794025282120147,2.69084453533293,2.34913127700424,0.847727604638247,3.00091096084402,0.824420233907511,1.54584324027377,1.8611685633159,1.85653965465393,0.68205903612839,1.00973509697646,1.01254888506529,0.80823028409406,3.19508633264953,1.81353776809752,1.18692414617341,0.57978255948989,2.72746120590835,0.573609190778008,0,0,0,0,0.252320850875628,0,1.56449532329816,3.21620469096443,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,1.88724591328378,0.439001141634502,0,0,0,0,0,5.77325368101093,0.34779121492523,1.17408694235822,0,0,0,0,0,0.984868024349589,1.17002132569619,0.594524649154913,0.93733833986777,7.72717789714754,0.425325291727159,0.53735113621709,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,2.56684000373325,1.16344544182,0,6.762422020448,0.797814349754612,0,0.771622122786426,1.41849132023278,0.799266537048298,0.714889968290738,0,0,1.30294473717494,0,0.791951872933429,9.04318131178758,0.871533458600294,17.0953814921318,9.72990245129524,3.01354254859276,25.3000727379638,1.4377491329495,1.14861935834114,0,4.48822050669496,3.28762116080613,1.07436577943937,1.00876629594175,0.394061520403854,0.431255149719035,0.641715181398742,0.508189248444927,0,0,0,0,14.9801404789436,29.9161459204025,0.828831026872071,0.24538298343828,1.50051156317903,0.271265023699736,2.9115920614313,3.56857977594324,1.26161932027148,0.937131319941706,0,0,0,1.99267679560631,0.737476674166813,1.30325421702124,0,0,0.206768026122887,0.431428401637234,0.640365346820666,0,0,0.30239029332968,1.24053903909388,0.767309866440312,0.561320188866147,0.512556597022804,1.02341449813341,3.21707842287215,0,2.15893571323718,2.13074070375753,1.47828880824856,0,0.929683027679674,0,1.60405176242628,0.0920809889358963,0.459257792658427,0.364182336013434,0.393373244878272,0,0.308061348417659,0,0,0.211103257785751,0,0,0.647747748306418,0,0,0,0,0,0.223874754722178,0,0,0,0.656029291399411,0,0.103041011647722,0,0.082509499920588,0,0.650060246036521,3.21367859688319,0,0.154048617114644,0,0.137836572484531,0.859361958946189,0.435050081742686,0.340906509664404,0.623224249527161,0.495854746082934,0.192190067365106,0.255225424989168,0,0,0.62962469366128,2.7881490806424,1.23213432070436,0.532306030317022,0,0.9266210955196,1.14499909393593,0,2.53103539774981,1.14378116354295,0,1.28381696410176,0,0,0.719489830333259,0.54907405947211,0.942499218765491,0,1.58510321173008,0.421258456238981,0,4.38684281336312,0,0.272999822815972,0.707027159768564,0,0,3.3171948762061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| |||
|short_description=p2@U00943 | |||
}} |
Revision as of 00:27, 11 September 2013
Short description: | p2@U00943 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_U00943_5end |
Coexpression cluster: | C3333_Neutrophils_Monocytederived_Mesothelial_mesenchymal_Mallassezderived_Fibroblast_leiomyoma |
Association with transcript: | 73bp_to_U00943_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.55e-27 | 48 |
phagocyte | 1.55e-27 | 48 |
classical monocyte | 5.48e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.48e-25 | 42 |
macrophage dendritic cell progenitor | 2.11e-22 | 61 |
monopoietic cell | 3.92e-22 | 59 |
monocyte | 3.92e-22 | 59 |
monoblast | 3.92e-22 | 59 |
promonocyte | 3.92e-22 | 59 |
myeloid leukocyte | 3.21e-21 | 72 |
granulocyte monocyte progenitor cell | 2.92e-19 | 67 |
myeloid lineage restricted progenitor cell | 1.76e-18 | 66 |
multi fate stem cell | 2.38e-18 | 427 |
somatic stem cell | 1.34e-17 | 433 |
stem cell | 1.24e-16 | 441 |
mesenchymal cell | 8.88e-16 | 354 |
connective tissue cell | 1.95e-15 | 361 |
motile cell | 2.41e-12 | 386 |
myeloid cell | 7.33e-12 | 108 |
common myeloid progenitor | 7.33e-12 | 108 |
nongranular leukocyte | 4.59e-08 | 115 |
leukocyte | 5.11e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 7.21e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.52e-20 | 76 |
bone element | 5.79e-19 | 82 |
musculoskeletal system | 5.98e-19 | 167 |
skeletal element | 3.37e-18 | 90 |
skeletal system | 1.90e-17 | 100 |
hematopoietic system | 6.64e-17 | 98 |
blood island | 6.64e-17 | 98 |
connective tissue | 5.33e-16 | 371 |
immune system | 6.67e-15 | 93 |
hemolymphoid system | 5.18e-14 | 108 |
lateral plate mesoderm | 8.82e-12 | 203 |
mesoderm | 1.86e-11 | 315 |
mesoderm-derived structure | 1.86e-11 | 315 |
presumptive mesoderm | 1.86e-11 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.