FFCP PHASE1:Hg19::chr12:88801610..88801614,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2247|description=CAGE_peak_at_chr12:88801610..88801614,-|id=chr12:88801610..88801614,-|ontology_enrichment_celltype=CL:0002620!8.73e-18!23;CL:0000057!3.95e-17!75;CL:0000055!1.10e-13!180;CL:0000188!1.36e-08!9|ontology_enrichment_celltype_v019=CL:0002620;2.70e-36;23!CL:0000188;4.63e-17;9!CL:0000594;5.08e-11;3!CL:0002570;3.53e-09;8!CL:0000057;7.57e-09;73!CL:0002551;8.66e-09;6!CL:0000680;1.04e-07;7|ontology_enrichment_celltype_v019_2=CL:0002620,5.38e-36,23;CL:0000057,1.75e-17,76;CL:0000188,4.30e-17,9;CL:0000594,5.11e-11,3;CL:0002570,4.44e-09,8;CL:0002551,1.19e-08,6;CL:0000048,6.70e-08,427;CL:0000187,1.04e-07,55;CL:0000723,1.26e-07,433;CL:0000034,2.83e-07,441;CL:0000680,3.73e-07,58;CL:0000056,3.73e-07,58;CL:0000355,3.73e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!9.00e-07!5;DOID:450!9.00e-07!5;DOID:66!9.00e-07!5;DOID:423!9.00e-07!5;DOID:0080000!9.00e-07!5;DOID:11722!9.00e-07!5|ontology_enrichment_disease_v019=DOID:17;5.35e-16;5!DOID:450;5.35e-16;5!DOID:66;5.35e-16;5!DOID:423;5.35e-16;5!DOID:0080000;5.35e-16;5!DOID:11722;5.35e-16;5|ontology_enrichment_disease_v019_2=DOID:17,9.00e-16,5;DOID:450,9.00e-16,5;DOID:66,9.00e-16,5;DOID:423,9.00e-16,5;DOID:0080000,9.00e-16,5;DOID:11722,9.00e-16,5|ontology_enrichment_uberon=UBERON:0002097!2.30e-11!40;UBERON:0003102!2.95e-10!95;UBERON:0002199!3.76e-10!45;UBERON:0002416!3.76e-10!45|ontology_enrichment_uberon_v019=UBERON:0002097;2.93e-19;41!UBERON:0002199;7.81e-16;46!UBERON:0002416;7.81e-16;46!UBERON:0003102;5.77e-12;50!UBERON:0001134;4.28e-09;16!UBERON:0002036;4.28e-09;16!UBERON:0002067;1.47e-08;9!UBERON:0002385;3.52e-08;31!UBERON:0001015;3.52e-08;31!UBERON:0000383;3.52e-08;31|ontology_enrichment_uberon_v019_2=UBERON:0002097,7.92e-26,41;UBERON:0002199,1.98e-22,46;UBERON:0002416,1.98e-22,46;UBERON:0003102,5.03e-12,99;UBERON:0002329,7.25e-11,71;UBERON:0003059,7.25e-11,71;UBERON:0007282,7.25e-11,71;UBERON:0004290,7.25e-11,71;UBERON:0009618,7.25e-11,71;UBERON:0003077,1.19e-10,72;UBERON:0007285,1.19e-10,72;UBERON:0007524,1.92e-10,73;UBERON:0000486,1.03e-09,83;UBERON:0007503,1.75e-09,78;UBERON:0002067,1.58e-08,9;UBERON:0004016,1.58e-08,9;UBERON:0010083,1.58e-08,9|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,1.46062018077475,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,1.98613771219828,1.43418310374407,0,0,0,0.24666754841716,0.622422070799533,0.942974704487816,0.163461903113459,0,0,0.234321431833797,0.624320153660641,0,1.19558944441441,4.22764195117554,4.37056949793955,3.08991774744947,3.47062091133319,0.491337269247072,1.85986406116378,0,0.247266929278557,0,0,0.673344455816265,0.625592599359821,2.49357703935765,0,0.612975591598039,0,0.113432183160021,3.22901344239952,1.06778694409284,4.02670612203168,4.50136644126603,2.67936576019941,3.34932702059318,0.744467425326359,6.07594796068558,1.55899208257918,9.08761587278812,3.49789614840738,0.646584227275248,8.87523981291536,2.41805035746337,1.3564847384839,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0.36497735907583,1.56449532329816,0.643240938192885,0,0,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.36669142910475,0.129271715757778,0,1.690605505112,0,0,0,0,0,0,0,0,1.30294473717494,0,0,1.50719688529793,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0,0.224170287987055,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0.473107245101804,0.117141414992713,0,0,0,0,0,3.73599542212756,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0.657017248110473,1.55776328755086,0.464841513839837,0.241718899183244,0,0.184161977871793,0,0.910455840033585,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.870036464629098,3.69716681075147,2.45605879561807,4.9621166094431,5.15617175367713,7.25083469571143,5.88063729171096,0,0.165284915360978,0,0.382838137483752,0,0,1.25924938732256,1.3940745403212,0.308033580176089,0,0,0,0.143124886741991,1.116475108079,0.632758849437452,0.953150969619124,0,0,0,0,0,0,0.117812402345686,0,0,1.26377536871694,0,6.09283724078211,0,0,0.848432591722276,1.13008116620243,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,1.31717957183961,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2247 | |||
|description=CAGE_peak_at_chr12:88801610..88801614,- | |||
|id=chr12:88801610..88801614,- | |||
|ontology_enrichment_celltype=CL:0002620!8.73e-18!23;CL:0000057!3.95e-17!75;CL:0000055!1.10e-13!180;CL:0000188!1.36e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.70e-36;23!CL:0000188;4.63e-17;9!CL:0000594;5.08e-11;3!CL:0002570;3.53e-09;8!CL:0000057;7.57e-09;73!CL:0002551;8.66e-09;6!CL:0000680;1.04e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.38e-36,23;CL:0000057,1.75e-17,76;CL:0000188,4.30e-17,9;CL:0000594,5.11e-11,3;CL:0002570,4.44e-09,8;CL:0002551,1.19e-08,6;CL:0000048,6.70e-08,427;CL:0000187,1.04e-07,55;CL:0000723,1.26e-07,433;CL:0000034,2.83e-07,441;CL:0000680,3.73e-07,58;CL:0000056,3.73e-07,58;CL:0000355,3.73e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.00e-07!5;DOID:450!9.00e-07!5;DOID:66!9.00e-07!5;DOID:423!9.00e-07!5;DOID:0080000!9.00e-07!5;DOID:11722!9.00e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;5.35e-16;5!DOID:450;5.35e-16;5!DOID:66;5.35e-16;5!DOID:423;5.35e-16;5!DOID:0080000;5.35e-16;5!DOID:11722;5.35e-16;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.00e-16,5;DOID:450,9.00e-16,5;DOID:66,9.00e-16,5;DOID:423,9.00e-16,5;DOID:0080000,9.00e-16,5;DOID:11722,9.00e-16,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.30e-11!40;UBERON:0003102!2.95e-10!95;UBERON:0002199!3.76e-10!45;UBERON:0002416!3.76e-10!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.93e-19;41!UBERON:0002199;7.81e-16;46!UBERON:0002416;7.81e-16;46!UBERON:0003102;5.77e-12;50!UBERON:0001134;4.28e-09;16!UBERON:0002036;4.28e-09;16!UBERON:0002067;1.47e-08;9!UBERON:0002385;3.52e-08;31!UBERON:0001015;3.52e-08;31!UBERON:0000383;3.52e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,7.92e-26,41;UBERON:0002199,1.98e-22,46;UBERON:0002416,1.98e-22,46;UBERON:0003102,5.03e-12,99;UBERON:0002329,7.25e-11,71;UBERON:0003059,7.25e-11,71;UBERON:0007282,7.25e-11,71;UBERON:0004290,7.25e-11,71;UBERON:0009618,7.25e-11,71;UBERON:0003077,1.19e-10,72;UBERON:0007285,1.19e-10,72;UBERON:0007524,1.92e-10,73;UBERON:0000486,1.03e-09,83;UBERON:0007503,1.75e-09,78;UBERON:0002067,1.58e-08,9;UBERON:0004016,1.58e-08,9;UBERON:0010083,1.58e-08,9 | |||
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| |||
|short_description=p@chr12:88801610..88801614,- | |||
}} |
Revision as of 00:47, 11 September 2013
Short description: | p@chr12:88801610..88801614, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:88801610..88801614, - |
Coexpression cluster: | C2247_liposarcoma_Fibroblast_Smooth_Skeletal_Mesenchymal_Pancreatic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.38e-36 | 23 |
fibroblast | 1.75e-17 | 76 |
cell of skeletal muscle | 4.30e-17 | 9 |
skeletal muscle satellite cell | 5.11e-11 | 3 |
mesenchymal stem cell of adipose | 4.44e-09 | 8 |
fibroblast of dermis | 1.19e-08 | 6 |
multi fate stem cell | 6.70e-08 | 427 |
muscle cell | 1.04e-07 | 55 |
somatic stem cell | 1.26e-07 | 433 |
stem cell | 2.83e-07 | 441 |
muscle precursor cell | 3.73e-07 | 58 |
myoblast | 3.73e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.73e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
skin of body | 7.92e-26 | 41 |
integument | 1.98e-22 | 46 |
integumental system | 1.98e-22 | 46 |
surface structure | 5.03e-12 | 99 |
somite | 7.25e-11 | 71 |
presomitic mesoderm | 7.25e-11 | 71 |
presumptive segmental plate | 7.25e-11 | 71 |
dermomyotome | 7.25e-11 | 71 |
trunk paraxial mesoderm | 7.25e-11 | 71 |
paraxial mesoderm | 1.19e-10 | 72 |
presumptive paraxial mesoderm | 1.19e-10 | 72 |
dense mesenchyme tissue | 1.92e-10 | 73 |
multilaminar epithelium | 1.03e-09 | 83 |
epithelial vesicle | 1.75e-09 | 78 |
dermis | 1.58e-08 | 9 |
dermatome | 1.58e-08 | 9 |
future dermis | 1.58e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.00e-16 | 5 |
myotonic disease | 9.00e-16 | 5 |
muscle tissue disease | 9.00e-16 | 5 |
myopathy | 9.00e-16 | 5 |
muscular disease | 9.00e-16 | 5 |
myotonic dystrophy | 9.00e-16 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.