FFCP PHASE1:Hg19::chr1:1935268..1935281,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=85452|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27917,29368|TSSclassifier=S|UniProt=Q9C0B2|association_with_transcript=0bp_to_ENST00000270720,ENST00000378592,NM_001080484,uc001aim.1,uc001ain.1_5end|coexpression_cluster_id=C1|description=CAGE_peak_6_at_C1orf222_5end,CAGE_peak_6_at_KIAA1751_5end|id=chr1:1935268..1935281,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.32e-43!57;UBERON:0005068!1.32e-43!57;UBERON:0006241!1.32e-43!57;UBERON:0007135!1.32e-43!57;UBERON:0002616!6.96e-42!59;UBERON:0002780!5.63e-39!41;UBERON:0001890!5.63e-39!41;UBERON:0006240!5.63e-39!41;UBERON:0003080!6.41e-38!42;UBERON:0000955!8.16e-37!69;UBERON:0006238!8.16e-37!69;UBERON:0002020!6.30e-36!34;UBERON:0003528!6.30e-36!34;UBERON:0001893!8.23e-36!34;UBERON:0002791!1.39e-33!33;UBERON:0001017!4.40e-32!82;UBERON:0002346!5.76e-31!90;UBERON:0001869!5.96e-31!32;UBERON:0005743!3.04e-30!86;UBERON:0007023!3.19e-30!115;UBERON:0003075!1.74e-28!86;UBERON:0007284!1.74e-28!86;UBERON:0000073!1.15e-26!94;UBERON:0001016!1.15e-26!94;UBERON:0002619!2.15e-24!22;UBERON:0003056!2.40e-24!61;UBERON:0001950!4.20e-23!20;UBERON:0000956!3.44e-21!25;UBERON:0000203!3.44e-21!25;UBERON:0000153!1.45e-20!129;UBERON:0007811!1.45e-20!129;UBERON:0000033!2.41e-20!123;UBERON:0002298!1.41e-19!8;UBERON:0002308!1.88e-17!9;UBERON:0000125!1.88e-17!9;UBERON:0000025!6.88e-15!194;UBERON:0001871!8.20e-14!7;UBERON:0000200!3.56e-13!6;UBERON:0000924!4.84e-13!173;UBERON:0006601!4.84e-13!173;UBERON:0002420!7.60e-13!9;UBERON:0007245!7.60e-13!9;UBERON:0010009!7.60e-13!9;UBERON:0010011!7.60e-13!9;UBERON:0000454!7.60e-13!9;UBERON:0009663!5.65e-12!7;UBERON:0004121!1.53e-11!169;UBERON:0001896!3.73e-11!3;UBERON:0005290!3.73e-11!3;UBERON:0010096!3.73e-11!3;UBERON:0004111!4.99e-11!241;UBERON:0000988!2.25e-10!3;UBERON:0006331!2.65e-10!3;UBERON:0002771!5.04e-10!3;UBERON:0004733!1.51e-09!12;UBERON:0002028!1.51e-09!12;UBERON:0007277!1.51e-09!12;UBERON:0004732!9.29e-09!13;UBERON:0000369!1.03e-08!4;UBERON:0002435!1.03e-08!4;UBERON:0000204!1.03e-08!4;UBERON:0010082!1.03e-08!4;UBERON:0000477!1.46e-08!286;UBERON:0000475!2.63e-08!365;UBERON:0003127!3.26e-08!2;UBERON:0000007!6.50e-08!2;UBERON:0002148!1.50e-07!2;UBERON:0009662!1.50e-07!2;UBERON:0003076!1.70e-07!15;UBERON:0003057!1.70e-07!15;UBERON:0000064!2.48e-07!219;UBERON:0000483!2.81e-07!309;UBERON:0000119!4.00e-07!312|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0001896;1.03e-17;3!UBERON:0005290;1.03e-17;3!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0002298;1.50e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0001896,1.12e-17,3;UBERON:0005290,1.12e-17,3;UBERON:0010096,1.12e-17,3;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0002298,1.57e-09,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0.482385754501632,0,0,0,0.219385397153973,0,0,0,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0.432271251462318,0,0,0,0.124252535565433,0.471388069233591,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=85452 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27917,29368 | |||
|TSSclassifier=S | |||
|UniProt=Q9C0B2 | |||
|association_with_transcript=0bp_to_ENST00000270720,ENST00000378592,NM_001080484,uc001aim.1,uc001ain.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_C1orf222_5end,CAGE_peak_6_at_KIAA1751_5end | |||
|id=chr1:1935268..1935281,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.32e-43!57;UBERON:0005068!1.32e-43!57;UBERON:0006241!1.32e-43!57;UBERON:0007135!1.32e-43!57;UBERON:0002616!6.96e-42!59;UBERON:0002780!5.63e-39!41;UBERON:0001890!5.63e-39!41;UBERON:0006240!5.63e-39!41;UBERON:0003080!6.41e-38!42;UBERON:0000955!8.16e-37!69;UBERON:0006238!8.16e-37!69;UBERON:0002020!6.30e-36!34;UBERON:0003528!6.30e-36!34;UBERON:0001893!8.23e-36!34;UBERON:0002791!1.39e-33!33;UBERON:0001017!4.40e-32!82;UBERON:0002346!5.76e-31!90;UBERON:0001869!5.96e-31!32;UBERON:0005743!3.04e-30!86;UBERON:0007023!3.19e-30!115;UBERON:0003075!1.74e-28!86;UBERON:0007284!1.74e-28!86;UBERON:0000073!1.15e-26!94;UBERON:0001016!1.15e-26!94;UBERON:0002619!2.15e-24!22;UBERON:0003056!2.40e-24!61;UBERON:0001950!4.20e-23!20;UBERON:0000956!3.44e-21!25;UBERON:0000203!3.44e-21!25;UBERON:0000153!1.45e-20!129;UBERON:0007811!1.45e-20!129;UBERON:0000033!2.41e-20!123;UBERON:0002298!1.41e-19!8;UBERON:0002308!1.88e-17!9;UBERON:0000125!1.88e-17!9;UBERON:0000025!6.88e-15!194;UBERON:0001871!8.20e-14!7;UBERON:0000200!3.56e-13!6;UBERON:0000924!4.84e-13!173;UBERON:0006601!4.84e-13!173;UBERON:0002420!7.60e-13!9;UBERON:0007245!7.60e-13!9;UBERON:0010009!7.60e-13!9;UBERON:0010011!7.60e-13!9;UBERON:0000454!7.60e-13!9;UBERON:0009663!5.65e-12!7;UBERON:0004121!1.53e-11!169;UBERON:0001896!3.73e-11!3;UBERON:0005290!3.73e-11!3;UBERON:0010096!3.73e-11!3;UBERON:0004111!4.99e-11!241;UBERON:0000988!2.25e-10!3;UBERON:0006331!2.65e-10!3;UBERON:0002771!5.04e-10!3;UBERON:0004733!1.51e-09!12;UBERON:0002028!1.51e-09!12;UBERON:0007277!1.51e-09!12;UBERON:0004732!9.29e-09!13;UBERON:0000369!1.03e-08!4;UBERON:0002435!1.03e-08!4;UBERON:0000204!1.03e-08!4;UBERON:0010082!1.03e-08!4;UBERON:0000477!1.46e-08!286;UBERON:0000475!2.63e-08!365;UBERON:0003127!3.26e-08!2;UBERON:0000007!6.50e-08!2;UBERON:0002148!1.50e-07!2;UBERON:0009662!1.50e-07!2;UBERON:0003076!1.70e-07!15;UBERON:0003057!1.70e-07!15;UBERON:0000064!2.48e-07!219;UBERON:0000483!2.81e-07!309;UBERON:0000119!4.00e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0001896;1.03e-17;3!UBERON:0005290;1.03e-17;3!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0002298;1.50e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0001896,1.12e-17,3;UBERON:0005290,1.12e-17,3;UBERON:0010096,1.12e-17,3;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0002298,1.57e-09,6 | |||
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|short_description=p6@C1orf222,p6@KIAA1751 | |||
}} |
Revision as of 02:31, 12 September 2013
Short description: | p6@C1orf222, p6@KIAA1751 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_C1orf222_5end, CAGE_peak_6_at_KIAA1751_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000270720, ENST00000378592, NM_001080484, uc001aim.1, uc001ain.1_5end |
EntrezGene: | KIAA1751 |
HGNC: | 29368&submit=Submit 27917, 29368 |
UniProt: | Q9C0B2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
medulla oblongata | 1.12e-17 | 3 |
myelencephalon | 1.12e-17 | 3 |
future myelencephalon | 1.12e-17 | 3 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
brainstem | 1.57e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.