FFCP PHASE1:Hg19::chr1:202162920..202162945,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=59352|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19719|TSSclassifier=S|UniProt=F5H084|association_with_transcript=0bp_to_ENST00000420582_5end|coexpression_cluster_id=C3921|description=CAGE_peak_1_at_LGR6_5end|id=chr1:202162920..202162945,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000623;2.67e-09;3!CL:0000039;2.62e-07;7!CL:0000586;2.62e-07;7|ontology_enrichment_celltype_v019_2=CL:0000623,4.87e-09,3;CL:0000825,4.87e-09,3;CL:0000039,2.58e-07,7;CL:0000586,2.58e-07,7|ontology_enrichment_development_v019=UBERON:0004872;1.65e-10;7!UBERON:0009117;1.97e-07;10!UBERON:0005564;1.97e-07;10!UBERON:0006965;3.12e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.22e-49!115;UBERON:0001049!8.74e-23!57;UBERON:0005068!8.74e-23!57;UBERON:0006241!8.74e-23!57;UBERON:0007135!8.74e-23!57;UBERON:0003075!6.43e-19!86;UBERON:0007284!6.43e-19!86;UBERON:0002616!1.89e-17!59;UBERON:0002346!2.17e-17!90;UBERON:0001017!1.46e-15!82;UBERON:0005743!4.61e-15!86;UBERON:0000955!1.34e-14!69;UBERON:0006238!1.34e-14!69;UBERON:0003080!1.08e-12!42;UBERON:0003076!1.24e-12!15;UBERON:0003057!1.24e-12!15;UBERON:0000073!2.23e-12!94;UBERON:0001016!2.23e-12!94;UBERON:0002780!7.83e-12!41;UBERON:0001890!7.83e-12!41;UBERON:0006240!7.83e-12!41;UBERON:0004121!8.04e-11!169;UBERON:0004111!1.71e-10!241;UBERON:0000153!3.44e-10!129;UBERON:0007811!3.44e-10!129;UBERON:0000924!3.52e-10!173;UBERON:0006601!3.52e-10!173;UBERON:0004733!9.98e-10!12;UBERON:0002028!9.98e-10!12;UBERON:0007277!9.98e-10!12;UBERON:0000025!1.08e-09!194;UBERON:0000033!2.34e-09!123;UBERON:0003056!2.88e-09!61;UBERON:0000477!3.20e-09!286;UBERON:0004732!9.47e-09!13;UBERON:0000062!1.31e-08!511;UBERON:0002680!1.68e-08!9;UBERON:0001895!1.68e-08!9;UBERON:0010092!1.68e-08!9;UBERON:0002020!3.23e-08!34;UBERON:0003528!3.23e-08!34;UBERON:0001893!9.38e-08!34;UBERON:0002619!1.00e-07!22;UBERON:0001950!1.23e-07!20;UBERON:0001869!1.63e-07!32;UBERON:0002791!2.93e-07!33|ontology_enrichment_uberon_v019=UBERON:0004733;8.02e-16;12!UBERON:0002028;8.02e-16;12!UBERON:0004732;1.73e-14;13!UBERON:0002298;9.29e-14;6!UBERON:0002680;3.70e-12;9!UBERON:0001895;3.70e-12;9!UBERON:0000988;1.03e-10;3!UBERON:0000007;7.73e-08;2!UBERON:0002148;1.03e-07;2!UBERON:0006331;1.03e-07;2!UBERON:0009662;1.03e-07;2!UBERON:0001829;1.40e-07;2!UBERON:0007023;1.51e-07;114!UBERON:0001894;1.65e-07;7!UBERON:0000073;1.97e-07;53!UBERON:0002616;1.97e-07;53!UBERON:0000341;5.17e-07;2!UBERON:0001897;5.17e-07;2!UBERON:0010225;5.17e-07;2!UBERON:0003135;6.37e-07;11!UBERON:0000922;8.20e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.42e-24,114;UBERON:0003076,5.66e-19,15;UBERON:0003057,5.66e-19,15;UBERON:0004733,9.00e-16,12;UBERON:0002028,9.00e-16,12;UBERON:0007277,9.00e-16,12;UBERON:0004732,1.92e-14,13;UBERON:0002298,8.64e-14,6;UBERON:0001049,5.73e-13,56;UBERON:0005068,5.73e-13,56;UBERON:0006241,5.73e-13,56;UBERON:0007135,5.73e-13,56;UBERON:0002680,4.40e-12,9;UBERON:0001895,4.40e-12,9;UBERON:0010092,4.40e-12,9;UBERON:0000073,8.86e-11,53;UBERON:0002616,8.86e-11,53;UBERON:0000988,1.04e-10,3;UBERON:0003075,1.02e-09,82;UBERON:0007284,1.02e-09,82;UBERON:0002346,4.73e-09,86;UBERON:0010371,1.29e-08,104;UBERON:0010314,7.05e-08,132;UBERON:0000007,7.62e-08,2;UBERON:0002148,9.87e-08,2;UBERON:0006331,9.87e-08,2;UBERON:0009662,9.87e-08,2;UBERON:0001894,1.41e-07,7;UBERON:0006222,1.41e-07,7;UBERON:0001829,1.45e-07,2;UBERON:0001017,1.47e-07,81;UBERON:0000955,1.83e-07,68;UBERON:0006238,1.83e-07,68;UBERON:0001897,3.94e-07,2;UBERON:0010225,3.94e-07,2;UBERON:0000341,5.03e-07,2;UBERON:0003135,6.26e-07,11;UBERON:0004111,9.29e-07,240|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,1.02000345622126,0,0,0,0,0,0,0,0.393364276848904,2.68680578668049,2.32224184974114,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.511946444617674,1.24930726552346,0.947109008176067,0,1.20964045934839,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0.378139268656271,0.886917589850256,0.263504357079378,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.504641701751257,0,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56139988262505,1.07813787429759,1.02674429023799,0.254094624222463,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=59352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19719 | |||
|TSSclassifier=S | |||
|UniProt=F5H084 | |||
|association_with_transcript=0bp_to_ENST00000420582_5end | |||
|coexpression_cluster_id=C3921 | |||
|description=CAGE_peak_1_at_LGR6_5end | |||
|id=chr1:202162920..202162945,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.67e-09;3!CL:0000039;2.62e-07;7!CL:0000586;2.62e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.87e-09,3;CL:0000825,4.87e-09,3;CL:0000039,2.58e-07,7;CL:0000586,2.58e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.65e-10;7!UBERON:0009117;1.97e-07;10!UBERON:0005564;1.97e-07;10!UBERON:0006965;3.12e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.22e-49!115;UBERON:0001049!8.74e-23!57;UBERON:0005068!8.74e-23!57;UBERON:0006241!8.74e-23!57;UBERON:0007135!8.74e-23!57;UBERON:0003075!6.43e-19!86;UBERON:0007284!6.43e-19!86;UBERON:0002616!1.89e-17!59;UBERON:0002346!2.17e-17!90;UBERON:0001017!1.46e-15!82;UBERON:0005743!4.61e-15!86;UBERON:0000955!1.34e-14!69;UBERON:0006238!1.34e-14!69;UBERON:0003080!1.08e-12!42;UBERON:0003076!1.24e-12!15;UBERON:0003057!1.24e-12!15;UBERON:0000073!2.23e-12!94;UBERON:0001016!2.23e-12!94;UBERON:0002780!7.83e-12!41;UBERON:0001890!7.83e-12!41;UBERON:0006240!7.83e-12!41;UBERON:0004121!8.04e-11!169;UBERON:0004111!1.71e-10!241;UBERON:0000153!3.44e-10!129;UBERON:0007811!3.44e-10!129;UBERON:0000924!3.52e-10!173;UBERON:0006601!3.52e-10!173;UBERON:0004733!9.98e-10!12;UBERON:0002028!9.98e-10!12;UBERON:0007277!9.98e-10!12;UBERON:0000025!1.08e-09!194;UBERON:0000033!2.34e-09!123;UBERON:0003056!2.88e-09!61;UBERON:0000477!3.20e-09!286;UBERON:0004732!9.47e-09!13;UBERON:0000062!1.31e-08!511;UBERON:0002680!1.68e-08!9;UBERON:0001895!1.68e-08!9;UBERON:0010092!1.68e-08!9;UBERON:0002020!3.23e-08!34;UBERON:0003528!3.23e-08!34;UBERON:0001893!9.38e-08!34;UBERON:0002619!1.00e-07!22;UBERON:0001950!1.23e-07!20;UBERON:0001869!1.63e-07!32;UBERON:0002791!2.93e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;8.02e-16;12!UBERON:0002028;8.02e-16;12!UBERON:0004732;1.73e-14;13!UBERON:0002298;9.29e-14;6!UBERON:0002680;3.70e-12;9!UBERON:0001895;3.70e-12;9!UBERON:0000988;1.03e-10;3!UBERON:0000007;7.73e-08;2!UBERON:0002148;1.03e-07;2!UBERON:0006331;1.03e-07;2!UBERON:0009662;1.03e-07;2!UBERON:0001829;1.40e-07;2!UBERON:0007023;1.51e-07;114!UBERON:0001894;1.65e-07;7!UBERON:0000073;1.97e-07;53!UBERON:0002616;1.97e-07;53!UBERON:0000341;5.17e-07;2!UBERON:0001897;5.17e-07;2!UBERON:0010225;5.17e-07;2!UBERON:0003135;6.37e-07;11!UBERON:0000922;8.20e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.42e-24,114;UBERON:0003076,5.66e-19,15;UBERON:0003057,5.66e-19,15;UBERON:0004733,9.00e-16,12;UBERON:0002028,9.00e-16,12;UBERON:0007277,9.00e-16,12;UBERON:0004732,1.92e-14,13;UBERON:0002298,8.64e-14,6;UBERON:0001049,5.73e-13,56;UBERON:0005068,5.73e-13,56;UBERON:0006241,5.73e-13,56;UBERON:0007135,5.73e-13,56;UBERON:0002680,4.40e-12,9;UBERON:0001895,4.40e-12,9;UBERON:0010092,4.40e-12,9;UBERON:0000073,8.86e-11,53;UBERON:0002616,8.86e-11,53;UBERON:0000988,1.04e-10,3;UBERON:0003075,1.02e-09,82;UBERON:0007284,1.02e-09,82;UBERON:0002346,4.73e-09,86;UBERON:0010371,1.29e-08,104;UBERON:0010314,7.05e-08,132;UBERON:0000007,7.62e-08,2;UBERON:0002148,9.87e-08,2;UBERON:0006331,9.87e-08,2;UBERON:0009662,9.87e-08,2;UBERON:0001894,1.41e-07,7;UBERON:0006222,1.41e-07,7;UBERON:0001829,1.45e-07,2;UBERON:0001017,1.47e-07,81;UBERON:0000955,1.83e-07,68;UBERON:0006238,1.83e-07,68;UBERON:0001897,3.94e-07,2;UBERON:0010225,3.94e-07,2;UBERON:0000341,5.03e-07,2;UBERON:0003135,6.26e-07,11;UBERON:0004111,9.29e-07,240 | |||
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|short_description=p1@LGR6 | |||
}} |
Revision as of 02:49, 12 September 2013
Short description: | p1@LGR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LGR6_5end |
Coexpression cluster: | C3921_aorta_gall_heart_skin_pituitary_lung_testicular |
Association with transcript: | 0bp_to_ENST00000420582_5end |
EntrezGene: | LGR6 |
HGNC: | 19719 |
UniProt: | F5H084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.87e-09 | 3 |
pro-NK cell | 4.87e-09 | 3 |
germ line cell | 2.58e-07 | 7 |
germ cell | 2.58e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.