FFCP PHASE1:Hg19::chr20:43300367..43300404,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79015|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_NR_034104_5end|description=CAGE_peak_1_at_LOC79015_5end|id=chr20:43300367..43300404,-|ontology_enrichment_celltype=CL:0000791!3.35e-25!18;CL:0000789!3.35e-25!18;CL:0002420!3.35e-25!18;CL:0002419!3.35e-25!18;CL:0000790!3.35e-25!18;CL:0000084!3.32e-24!25;CL:0000827!3.32e-24!25;CL:0000838!3.21e-23!52;CL:0000542!1.12e-22!53;CL:0000051!1.12e-22!53;CL:0000625!1.05e-18!11;CL:0002087!3.35e-13!119;CL:0000898!2.24e-11!3;CL:0000738!2.38e-11!140;CL:0000842!4.58e-10!3;CL:0002031!2.77e-09!124;CL:0000037!7.30e-09!172;CL:0000566!7.30e-09!172;CL:0000893!2.38e-08!2;CL:0002489!2.38e-08!2;CL:0000809!2.38e-08!2;CL:0000808!2.38e-08!2;CL:0000894!2.38e-08!2;CL:0000806!2.38e-08!2;CL:0000807!2.38e-08!2;CL:0000805!2.38e-08!2;CL:0002425!2.38e-08!2;CL:0000815!4.94e-08!2;CL:0000792!4.94e-08!2;CL:0002677!4.94e-08!2;CL:0000988!5.15e-08!182;CL:0000224!1.18e-07!4|ontology_enrichment_celltype_v019=CL:0000084;1.49e-35;25!CL:0000898;1.27e-33;3!CL:0002127;7.62e-26;1!CL:0000911;7.62e-26;1!CL:0000895;7.62e-26;1!CL:0000814;7.62e-26;1!CL:0000791;2.21e-22;18!CL:0000789;2.21e-22;18!CL:0002419;2.21e-22;18!CL:0000624;2.19e-17;6!CL:0000815;1.21e-13;2!CL:0000792;1.21e-13;2!CL:0002677;1.21e-13;2!CL:0000542;1.35e-10;53|ontology_enrichment_celltype_v019_2=CL:0000893,1.80e-49,2;CL:0002489,1.80e-49,2;CL:0000809,1.80e-49,2;CL:0000808,1.80e-49,2;CL:0000894,1.80e-49,2;CL:0000806,1.80e-49,2;CL:0000807,1.80e-49,2;CL:0000805,1.80e-49,2;CL:0002425,1.80e-49,2;CL:0000084,1.53e-35,25;CL:0000827,1.53e-35,25;CL:0000898,1.50e-33,3;CL:0000810,9.79e-26,1;CL:0000895,9.79e-26,1;CL:0002436,9.79e-26,1;CL:0002427,9.79e-26,1;CL:0002428,9.79e-26,1;CL:0002429,9.79e-26,1;CL:0002433,9.79e-26,1;CL:0002431,9.79e-26,1;CL:0002432,9.79e-26,1;CL:0002127,1.26e-25,1;CL:0000914,1.26e-25,1;CL:0000911,1.26e-25,1;CL:0000814,1.26e-25,1;CL:0002042,1.26e-25,1;CL:0002039,1.26e-25,1;CL:0002040,1.26e-25,1;CL:0002041,1.26e-25,1;CL:0000791,2.54e-22,18;CL:0000789,2.54e-22,18;CL:0002420,2.54e-22,18;CL:0002419,2.54e-22,18;CL:0000790,2.54e-22,18;CL:0000624,2.38e-17,6;CL:0000838,3.16e-17,52;CL:0000542,6.63e-17,53;CL:0000051,6.63e-17,53;CL:0000815,1.21e-13,2;CL:0000792,1.21e-13,2;CL:0002677,1.21e-13,2;CL:0000738,7.15e-09,136;CL:0002087,9.10e-08,115;CL:0002031,1.91e-07,120;CL:0000037,3.59e-07,168;CL:0000988,8.41e-07,177|ontology_enrichment_development_v019=CL:0002425;8.49e-50;2!CL:0002427;7.62e-26;1!CL:0000790;2.21e-22;18!CL:0000051;1.35e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2531;9.45e-08;51!DOID:0060083;9.45e-08;51|ontology_enrichment_disease_v019_2=DOID:2531,3.21e-08,51;DOID:0060083,3.21e-08,51|ontology_enrichment_uberon=UBERON:0002370!6.96e-15!4;UBERON:0005058!6.96e-15!4;UBERON:0009113!6.96e-15!4;UBERON:0003295!6.96e-15!4;UBERON:0005562!6.96e-15!4;UBERON:0004177!2.38e-12!7;UBERON:0003351!6.48e-10!6|ontology_enrichment_uberon_v019=UBERON:0002370;1.21e-13;2!UBERON:0005058;1.21e-13;2!UBERON:0009113;1.21e-13;2|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.06e-55,4;UBERON:0005058,2.06e-55,4;UBERON:0009113,2.06e-55,4;UBERON:0003295,2.06e-55,4;UBERON:0005562,2.06e-55,4;UBERON:0003351,2.83e-37,6;UBERON:0004177,4.39e-32,7;UBERON:0005057,4.39e-32,7;UBERON:0000974,1.01e-22,10;UBERON:0003408,1.01e-22,10;UBERON:0001042,1.01e-22,10;UBERON:0009145,1.01e-22,10;UBERON:0006562,9.82e-21,11;UBERON:0009722,9.82e-21,11;UBERON:0007690,9.82e-21,11;UBERON:0008814,5.70e-13,18;UBERON:0001557,2.52e-12,19;UBERON:0004807,1.41e-08,28;UBERON:0000077,2.64e-08,29;UBERON:0002368,5.53e-07,35|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83593247695339,0.32592226663359,0,0,0.334231370655521,1.17842362989935,0.664601683750863,0.270803863765016,0.896639238079726,0.390178042679635,0.164437904603676,0.276350017785848,0.289803085735052,0.444859689486181,0.535081656179426,0,0.113309342697566,1.14966148080576,0.34362744548263,0.759059076058509,0.95569624297229,3.25541726928209,0,0.301150238155546,0.383959833463255,0,0.710331756132051,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.197030760201927,0.215627574859517,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_034104_5end | |||
|description=CAGE_peak_1_at_LOC79015_5end | |||
|id=chr20:43300367..43300404,- | |||
|ontology_enrichment_celltype=CL:0000791!3.35e-25!18;CL:0000789!3.35e-25!18;CL:0002420!3.35e-25!18;CL:0002419!3.35e-25!18;CL:0000790!3.35e-25!18;CL:0000084!3.32e-24!25;CL:0000827!3.32e-24!25;CL:0000838!3.21e-23!52;CL:0000542!1.12e-22!53;CL:0000051!1.12e-22!53;CL:0000625!1.05e-18!11;CL:0002087!3.35e-13!119;CL:0000898!2.24e-11!3;CL:0000738!2.38e-11!140;CL:0000842!4.58e-10!3;CL:0002031!2.77e-09!124;CL:0000037!7.30e-09!172;CL:0000566!7.30e-09!172;CL:0000893!2.38e-08!2;CL:0002489!2.38e-08!2;CL:0000809!2.38e-08!2;CL:0000808!2.38e-08!2;CL:0000894!2.38e-08!2;CL:0000806!2.38e-08!2;CL:0000807!2.38e-08!2;CL:0000805!2.38e-08!2;CL:0002425!2.38e-08!2;CL:0000815!4.94e-08!2;CL:0000792!4.94e-08!2;CL:0002677!4.94e-08!2;CL:0000988!5.15e-08!182;CL:0000224!1.18e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.49e-35;25!CL:0000898;1.27e-33;3!CL:0002127;7.62e-26;1!CL:0000911;7.62e-26;1!CL:0000895;7.62e-26;1!CL:0000814;7.62e-26;1!CL:0000791;2.21e-22;18!CL:0000789;2.21e-22;18!CL:0002419;2.21e-22;18!CL:0000624;2.19e-17;6!CL:0000815;1.21e-13;2!CL:0000792;1.21e-13;2!CL:0002677;1.21e-13;2!CL:0000542;1.35e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.80e-49,2;CL:0002489,1.80e-49,2;CL:0000809,1.80e-49,2;CL:0000808,1.80e-49,2;CL:0000894,1.80e-49,2;CL:0000806,1.80e-49,2;CL:0000807,1.80e-49,2;CL:0000805,1.80e-49,2;CL:0002425,1.80e-49,2;CL:0000084,1.53e-35,25;CL:0000827,1.53e-35,25;CL:0000898,1.50e-33,3;CL:0000810,9.79e-26,1;CL:0000895,9.79e-26,1;CL:0002436,9.79e-26,1;CL:0002427,9.79e-26,1;CL:0002428,9.79e-26,1;CL:0002429,9.79e-26,1;CL:0002433,9.79e-26,1;CL:0002431,9.79e-26,1;CL:0002432,9.79e-26,1;CL:0002127,1.26e-25,1;CL:0000914,1.26e-25,1;CL:0000911,1.26e-25,1;CL:0000814,1.26e-25,1;CL:0002042,1.26e-25,1;CL:0002039,1.26e-25,1;CL:0002040,1.26e-25,1;CL:0002041,1.26e-25,1;CL:0000791,2.54e-22,18;CL:0000789,2.54e-22,18;CL:0002420,2.54e-22,18;CL:0002419,2.54e-22,18;CL:0000790,2.54e-22,18;CL:0000624,2.38e-17,6;CL:0000838,3.16e-17,52;CL:0000542,6.63e-17,53;CL:0000051,6.63e-17,53;CL:0000815,1.21e-13,2;CL:0000792,1.21e-13,2;CL:0002677,1.21e-13,2;CL:0000738,7.15e-09,136;CL:0002087,9.10e-08,115;CL:0002031,1.91e-07,120;CL:0000037,3.59e-07,168;CL:0000988,8.41e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002425;8.49e-50;2!CL:0002427;7.62e-26;1!CL:0000790;2.21e-22;18!CL:0000051;1.35e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2531;9.45e-08;51!DOID:0060083;9.45e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.21e-08,51;DOID:0060083,3.21e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002370!6.96e-15!4;UBERON:0005058!6.96e-15!4;UBERON:0009113!6.96e-15!4;UBERON:0003295!6.96e-15!4;UBERON:0005562!6.96e-15!4;UBERON:0004177!2.38e-12!7;UBERON:0003351!6.48e-10!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.21e-13;2!UBERON:0005058;1.21e-13;2!UBERON:0009113;1.21e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.06e-55,4;UBERON:0005058,2.06e-55,4;UBERON:0009113,2.06e-55,4;UBERON:0003295,2.06e-55,4;UBERON:0005562,2.06e-55,4;UBERON:0003351,2.83e-37,6;UBERON:0004177,4.39e-32,7;UBERON:0005057,4.39e-32,7;UBERON:0000974,1.01e-22,10;UBERON:0003408,1.01e-22,10;UBERON:0001042,1.01e-22,10;UBERON:0009145,1.01e-22,10;UBERON:0006562,9.82e-21,11;UBERON:0009722,9.82e-21,11;UBERON:0007690,9.82e-21,11;UBERON:0008814,5.70e-13,18;UBERON:0001557,2.52e-12,19;UBERON:0004807,1.41e-08,28;UBERON:0000077,2.64e-08,29;UBERON:0002368,5.53e-07,35 | |||
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|short_description=p1@LOC79015 | |||
}} |
Revision as of 08:36, 12 September 2013
Short description: | p1@LOC79015 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC79015_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_034104_5end |
EntrezGene: | LOC79015 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.06e-55 | 4 |
hemolymphoid system gland | 2.06e-55 | 4 |
thymic region | 2.06e-55 | 4 |
pharyngeal gland | 2.06e-55 | 4 |
thymus primordium | 2.06e-55 | 4 |
pharyngeal epithelium | 2.83e-37 | 6 |
hemopoietic organ | 4.39e-32 | 7 |
immune organ | 4.39e-32 | 7 |
neck | 1.01e-22 | 10 |
gland of gut | 1.01e-22 | 10 |
chordate pharynx | 1.01e-22 | 10 |
pharyngeal region of foregut | 1.01e-22 | 10 |
pharynx | 9.82e-21 | 11 |
entire pharyngeal arch endoderm | 9.82e-21 | 11 |
early pharyngeal endoderm | 9.82e-21 | 11 |
pharyngeal arch system | 5.70e-13 | 18 |
upper respiratory tract | 2.52e-12 | 19 |
respiratory system epithelium | 1.41e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 2.64e-08 | 29 |
endocrine gland | 5.53e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.21e-08 | 51 |
immune system cancer | 3.21e-08 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.