FFCP PHASE1:Hg19::chr2:118771733..118771744,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54520|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25611|TSSclassifier=S|UniProt=Q567U6|association_with_transcript=0bp_to_NM_019044_5end|description=CAGE_peak_3_at_CCDC93_5end|id=chr2:118771733..118771744,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.35e-12!115;UBERON:0000073!1.84e-07!94;UBERON:0001016!1.84e-07!94|ontology_enrichment_uberon_v019=UBERON:0000473;7.32e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.78e-09,56;UBERON:0005068,1.78e-09,56;UBERON:0006241,1.78e-09,56;UBERON:0007135,1.78e-09,56;UBERON:0001016,5.78e-09,89;UBERON:0007023,6.48e-09,114;UBERON:0001017,2.11e-08,81;UBERON:0002346,2.19e-08,86;UBERON:0003075,2.27e-08,82;UBERON:0007284,2.27e-08,82;UBERON:0003076,3.46e-08,15;UBERON:0003057,3.46e-08,15;UBERON:0000073,1.75e-07,53;UBERON:0002616,1.75e-07,53;UBERON:0000955,2.80e-07,68;UBERON:0006238,2.80e-07,68;UBERON:0000473,3.22e-07,8;UBERON:0010371,9.93e-07,104|phase1_expression=0.363356758541113,0,0.845726424575827,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0,0.305653622991805,0.164201178899891,0.157421562627358,0.393364276848904,0.383829398097213,0.309632246632152,0,0.30120591877825,0.369754010166788,0.852139206383318,0.426507697462265,0.293600439334847,0.553995408531877,0.200544447470142,0.217010870715852,2.91090116511902,1.94336199611388,0.515151135268373,0.145398238779565,1.51150377475524,0.242584061187816,0.929716147622738,0,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.818718450173537,0.674170453335254,1.53041946185451,0,1.27867425159808,0.659702600373432,0.199463657621632,0.426224750532694,2.03146467040009,0,0,0.75374599577023,0,0.65156653411535,0.605399502633369,1.84138817993782,0.316462387440884,0,0,0,0.22465726229299,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0.954053754535364,1.1384259382189,0,0,1.32171328579026,0,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0,0,0.657751618414705,0.276350017785848,0.289803085735052,0.593146252648242,0,0,0.226618685395132,0,0,0.506039384039006,0,0.651083453856419,2.85135613334512,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0,0.722878304769133,0.50133791063589,0.289693037921647,1.5905718941022,0,0.472674085820339,0.665188192387692,0.614843499851882,1.30979075497713,0.364295288292542,0.370784442784429,2.92092654289215,1.21890816109487,0.531831842075461,0.238490624305342,0,0,1.19257444420023,0,0.347140501607594,1.13061588384802,0.419499436209906,0,0,2.32575083252396,1.77883131343355,1.33888245105868,0.402829317109147,0.760272105718513,0,0.735326160691737,0,0.446498641420399,1.34717623575702,1.23872628531654,0,1.89853131913626,0.183201743930407,2.63560834872127,0,0,0,0.506522046658319,1.19168262731897,0.860509862246441,0.709336764396714,0,0,0,0.933633106199299,0.134710672069688,0.163461903113459,0.454072282934794,1.15235184896,0.468642863667593,0,0.570471821544449,0.597794722207204,0.587172493218824,0,0.561803226808994,0.816616685019573,0.122834317311768,0.516628905878827,0,0.247266929278557,0,0,0.673344455816265,0.375355559615893,0.277064115484183,0,0,0.751190294532984,0.113432183160021,0.358779271377724,0.640672166455702,0.211931901159562,0.900273288253207,0.824420233907511,0,0.744467425326359,0.843881661206331,0.487185025805993,1.00973509697646,0.920498986422993,0.484938170456436,0.710019185033229,0.302256294682921,0.508681776931463,0.773043412653187,1.63647672354501,0.286804595389004,0.365921118388786,0.397589304964456,0.116193942869518,0.725627385107593,0,1.09493207722749,0,0.643240938192885,0,0,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.737930631258681,0,0.109750285408626,0,0.603173834469785,0.185176890317059,0.325808305310325,0,0,0.927443239800615,0.469634776943287,0.288732895522148,0.462985512576611,0.190254152234598,0.790204397959275,0,0.246217006087397,2.34004265139238,0.594524649154913,0,0.503946384596579,0.708875486211932,0.0895585227028483,0.290633938513962,0,0.985326475791887,0.264145302039678,0.414656231081544,0.720599767084807,0.12624243342638,0.444485260045183,1.14596527667483,1.17217447210047,0,0,0,0.571652865261156,0.448524337381443,0.87192013766656,0.4400297149257,0.904902010304444,0,0,1.06375246633948,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.199945982364114,0,1.00451418286425,0,0,0,1.42636905040718,0.434343920002738,0.821905290201534,0.537182889719687,0.336255431980582,0.591092280605782,0.21562757485951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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54520 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25611 | |||
|TSSclassifier=S | |||
|UniProt=Q567U6 | |||
|association_with_transcript=0bp_to_NM_019044_5end | |||
|description=CAGE_peak_3_at_CCDC93_5end | |||
|id=chr2:118771733..118771744,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.35e-12!115;UBERON:0000073!1.84e-07!94;UBERON:0001016!1.84e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.32e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.78e-09,56;UBERON:0005068,1.78e-09,56;UBERON:0006241,1.78e-09,56;UBERON:0007135,1.78e-09,56;UBERON:0001016,5.78e-09,89;UBERON:0007023,6.48e-09,114;UBERON:0001017,2.11e-08,81;UBERON:0002346,2.19e-08,86;UBERON:0003075,2.27e-08,82;UBERON:0007284,2.27e-08,82;UBERON:0003076,3.46e-08,15;UBERON:0003057,3.46e-08,15;UBERON:0000073,1.75e-07,53;UBERON:0002616,1.75e-07,53;UBERON:0000955,2.80e-07,68;UBERON:0006238,2.80e-07,68;UBERON:0000473,3.22e-07,8;UBERON:0010371,9.93e-07,104 | |||
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| |||
|short_description=p3@CCDC93 | |||
}} |
Revision as of 13:14, 12 September 2013
Short description: | p3@CCDC93 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CCDC93_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_019044_5end |
EntrezGene: | CCDC93 |
HGNC: | 25611 |
UniProt: | Q567U6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.78e-09 | 56 |
neural rod | 1.78e-09 | 56 |
future spinal cord | 1.78e-09 | 56 |
neural keel | 1.78e-09 | 56 |
nervous system | 5.78e-09 | 89 |
adult organism | 6.48e-09 | 114 |
central nervous system | 2.11e-08 | 81 |
neurectoderm | 2.19e-08 | 86 |
neural plate | 2.27e-08 | 82 |
presumptive neural plate | 2.27e-08 | 82 |
posterior neural tube | 3.46e-08 | 15 |
chordal neural plate | 3.46e-08 | 15 |
regional part of nervous system | 1.75e-07 | 53 |
regional part of brain | 1.75e-07 | 53 |
brain | 2.80e-07 | 68 |
future brain | 2.80e-07 | 68 |
testis | 3.22e-07 | 8 |
ecto-epithelium | 9.93e-07 | 104 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.