FFCP PHASE1:Hg19::chr2:20550556..20550614,-: Difference between revisions
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{{FFCP | 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24.537422418474,10.8947747181114,21.0765197920019,15.6482935412286,15.0800012080492,10.3733738608548,17.2879993997479,15.9860586785182,12.2338226243049,15.4550518916271,14.7819449183042,8.20901415877807,13.3216586612918,4.99325275352352,8.14432922682883,10.3142839718556,5.33886732957922,8.6959225990831,10.2837028159003,8.08273443030458,7.8363229494506,9.55780602982214,8.99606224327209,12.1105106363482,6.22059311761283,6.91188457850787,8.34792098898774,9.46622936682476,6.09288339470073,13.4267341957538,13.2749521217868,9.02248679156903,6.03243887842042,9.15620544006817,8.00055529326307,7.55470551402144,5.05124233148879,11.3566408405786,6.74169406425562,8.57766365499703,6.00286871519987,7.02788369088044,9.02937649862952,13.2157820433492,14.327107286519,8.95524196766819,12.0606227268289,16.6087797189128,9.45278787527482,7.94029471069441,10.5059022621058,12.4354923023231,5.46947921119288,26.5456197411323,10.3275963684876,11.1606465863225,13.4123623289792,9.82829546539238,7.37318726261158,15.4257850051798,12.1992311471507,14.0833083196266,14.4660582915085,12.4853509784704,13.4397343683844,12.8689147101889,27.3713994414508,17.7773176112076,22.5353855819065,10.8513499880569,38.1141637290129,4.92224336866673,22.107791690575,14.2526128897853,16.2007026212241,12.0841653248299,31.5446980005013,10.4074197277111,9.52225047964847,7.04364597912361,16.6995985250795,18.420554922326,27.2973898987729,28.1009419009834,30.5006752428279,14.9379665322711,25.0287250729369,15.704636228507,15.8017826786651,17.3415493321178,13.5737162906042,22.1809279008649,10.2973165776135,8.97467903878131,12.332805771209,20.9084712810935,7.46308754203024,14.8487662134288,17.8096552247367,7.53350820546445,16.7077377425261,18.7079109392953,16.4026400708908,23.9756683941374,18.7710798173964,29.5366396869839,16.4477330057155,9.92422356778589,14.9490557705678,7.92127051365491,22.499477106888,28.2478326663812,14.5671745016792,25.4981654313453,38.5855310207479,12.4452706560242,11.3182086228696,12.6423703336907,19.4687409746033,10.5192518386732,13.0140740213721,24.5683380622109,18.2254084302562,16.8163297988273,47.4842534664938,7.12561051021451,9.07728206985395,18.0120891325174,12.9571161620836,8.02065835040064,8.34519707052381,12.827381835684,12.6401860139452,17.9254400948647,25.5766074871214,19.7904585057328,13.1348520810928,10.9073158091722,44.0322532198566,14.4337327182752,4.96330217062912,7.64431151181946,10.4025551571947,18.9429950877419,13.8986434479787,11.0062902321942,17.7606655861307,11.598144313382,31.0855035557849,12.1648521000295,30.4394685996893,9.63252735298305,23.1539468179868,12.6431594257243,20.3799838815009,28.4000901837236,16.3919670377968,17.8720572617379,15.9346409140039,12.7265335434878,11.5821995597818,19.9021088219148,30.0085566584214,6.62715747282486,22.2741885612253,17.0168824250244,17.5896434427875,27.6758604838769,8.4694769211766,25.6772373405338,20.4494188709025,18.8079006195862,22.9343333042322,13.2528112242275,17.4738129790651,30.9808990141668,28.5674493878316,7.06790534516827,9.24351257262837,6.48939843185684,13.7521403070236,8.85051132905934,8.2354025657434,13.1565590367156,15.2313921001369,24.7197279748733,19.8058956040976,16.2166414187032,15.5419195490584,11.6083721524229,21.6174961351361,38.5953507240775,19.7593478114904,41.853613573732,25.32648343271,6.72791175483681,24.313214462259,13.3397344712425,21.5539580417992,14.3737986455818,18.454462525997,19.2215510452373,18.9616403231228,15.7108308419181,18.8907402203556,13.5150597600858,9.52147142329821,2.34640942403454,30.0713952689851,26.0413554122073,27.9617845157915,27.7757835155616,15.0667191382519|short_description=p1@PUM2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23369 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14958 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000420234_5end | |||
|description=CAGE_peak_1_at_PUM2_5end | |||
|id=chr2:20550556..20550614,- | |||
|ontology_enrichment_celltype=CL:0000738!4.14e-19!140;CL:0000037!9.69e-18!172;CL:0000566!9.69e-18!172;CL:0002032!4.90e-16!165;CL:0000837!4.90e-16!165;CL:0000988!7.66e-16!182;CL:0002031!1.87e-15!124;CL:0002087!1.26e-14!119;CL:0000766!2.40e-09!76;CL:0000838!3.95e-09!52;CL:0000542!7.94e-09!53;CL:0000051!7.94e-09!53;CL:0000763!3.81e-08!112;CL:0000049!3.81e-08!112;CL:0000557!3.40e-07!71;CL:0000839!4.30e-07!70;CL:0000791!4.34e-07!18;CL:0000789!4.34e-07!18;CL:0002420!4.34e-07!18;CL:0002419!4.34e-07!18;CL:0000790!4.34e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.95e-07;18!CL:0000789;3.95e-07;18!CL:0002419;3.95e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.28e-20,136;CL:0000037,8.97e-19,168;CL:0000988,2.76e-17,177;CL:0002032,5.00e-17,161;CL:0000837,5.00e-17,161;CL:0002031,1.24e-16,120;CL:0002087,8.63e-16,115;CL:0000766,1.72e-10,72;CL:0000838,3.95e-09,52;CL:0000763,6.20e-09,108;CL:0000049,6.20e-09,108;CL:0000542,7.94e-09,53;CL:0000051,7.94e-09,53;CL:0000557,3.56e-08,67;CL:0000839,4.52e-08,66;CL:0000791,4.34e-07,18;CL:0000789,4.34e-07,18;CL:0002420,4.34e-07,18;CL:0002419,4.34e-07,18;CL:0000790,4.34e-07,18;CL:0002009,5.56e-07,61;CL:0002194,9.43e-07,59;CL:0000576,9.43e-07,59;CL:0000040,9.43e-07,59;CL:0000559,9.43e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000790;3.95e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000178;1.13e-08;15!UBERON:0000179;1.13e-08;15!UBERON:0000463;1.13e-08;15!UBERON:0002780;9.82e-08;41!UBERON:0001890;9.82e-08;41!UBERON:0000956;4.08e-07;25!UBERON:0000203;4.08e-07;25!UBERON:0001893;5.16e-07;34!UBERON:0002791;5.67e-07;32!UBERON:0001869;7.46e-07;32 | |||
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| |||
|short_description=p1@PUM2 | |||
}} |
Revision as of 16:10, 12 September 2013
Short description: | p1@PUM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PUM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000420234_5end |
EntrezGene: | PUM2 |
HGNC: | 14958 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.28e-20 | 136 |
hematopoietic stem cell | 8.97e-19 | 168 |
hematopoietic cell | 2.76e-17 | 177 |
hematopoietic oligopotent progenitor cell | 5.00e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.00e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 1.24e-16 | 120 |
nongranular leukocyte | 8.63e-16 | 115 |
myeloid leukocyte | 1.72e-10 | 72 |
lymphoid lineage restricted progenitor cell | 3.95e-09 | 52 |
myeloid cell | 6.20e-09 | 108 |
common myeloid progenitor | 6.20e-09 | 108 |
lymphocyte | 7.94e-09 | 53 |
common lymphoid progenitor | 7.94e-09 | 53 |
granulocyte monocyte progenitor cell | 3.56e-08 | 67 |
myeloid lineage restricted progenitor cell | 4.52e-08 | 66 |
mature alpha-beta T cell | 4.34e-07 | 18 |
alpha-beta T cell | 4.34e-07 | 18 |
immature T cell | 4.34e-07 | 18 |
mature T cell | 4.34e-07 | 18 |
immature alpha-beta T cell | 4.34e-07 | 18 |
macrophage dendritic cell progenitor | 5.56e-07 | 61 |
monopoietic cell | 9.43e-07 | 59 |
monocyte | 9.43e-07 | 59 |
monoblast | 9.43e-07 | 59 |
promonocyte | 9.43e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.87e-22 | 114 |
hematopoietic system | 5.72e-12 | 98 |
blood island | 5.72e-12 | 98 |
hemolymphoid system | 9.45e-11 | 108 |
regional part of forebrain | 8.14e-10 | 41 |
forebrain | 8.14e-10 | 41 |
anterior neural tube | 8.14e-10 | 41 |
future forebrain | 8.14e-10 | 41 |
neural tube | 5.16e-09 | 56 |
neural rod | 5.16e-09 | 56 |
future spinal cord | 5.16e-09 | 56 |
neural keel | 5.16e-09 | 56 |
blood | 1.09e-08 | 15 |
haemolymphatic fluid | 1.09e-08 | 15 |
organism substance | 1.09e-08 | 15 |
regional part of nervous system | 1.55e-08 | 53 |
regional part of brain | 1.55e-08 | 53 |
nervous system | 1.72e-08 | 89 |
telencephalon | 2.90e-08 | 34 |
brain grey matter | 5.22e-08 | 34 |
gray matter | 5.22e-08 | 34 |
central nervous system | 6.48e-08 | 81 |
brain | 9.10e-08 | 68 |
future brain | 9.10e-08 | 68 |
regional part of telencephalon | 9.43e-08 | 32 |
cerebral hemisphere | 1.31e-07 | 32 |
cerebral cortex | 3.36e-07 | 25 |
pallium | 3.36e-07 | 25 |
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