FFCP PHASE1:Mm9::chr10:13702915..13702936,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2540|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:13702915..13702936,+|id=chr10:13702915..13702936,+|ontology_enrichment_celltype=CL:0000838!5.30e-15!12;CL:0000542!1.35e-13!13;CL:0000051!1.35e-13!13;CL:0000084!1.57e-13!11;CL:0000827!1.57e-13!11;CL:0000988!5.66e-13!32;CL:0002032!5.66e-13!32;CL:0000037!5.66e-13!32;CL:0000566!5.66e-13!32;CL:0000837!5.66e-13!32;CL:0002320!8.58e-12!46;CL:0000134!8.58e-12!46;CL:0000063!2.15e-11!66;CL:0000791!2.79e-11!9;CL:0000789!2.79e-11!9;CL:0002420!2.79e-11!9;CL:0002419!2.79e-11!9;CL:0000790!2.79e-11!9;CL:0000624!7.43e-10!8;CL:0000738!1.20e-09!17;CL:0002087!1.20e-09!17;CL:0002031!2.20e-09!25;CL:0000219!4.65e-09!54;CL:0000893!5.01e-07!6;CL:0002489!5.01e-07!6;CL:0000898!5.01e-07!6;CL:0000809!5.01e-07!6;CL:0000810!5.01e-07!6;CL:0000895!5.01e-07!6;CL:0000808!5.01e-07!6;CL:0000894!5.01e-07!6;CL:0000806!5.01e-07!6;CL:0000807!5.01e-07!6;CL:0000805!5.01e-07!6;CL:0002425!5.01e-07!6;CL:0002436!5.01e-07!6;CL:0002427!5.01e-07!6;CL:0002428!5.01e-07!6;CL:0002429!5.01e-07!6;CL:0002433!5.01e-07!6;CL:0002431!5.01e-07!6;CL:0002432!5.01e-07!6;CL:0000034!7.33e-07!97|ontology_enrichment_celltype_v019_2=CL:0000838,5.91e-30,12;CL:0000542,1.47e-27,13;CL:0000051,1.47e-27,13;CL:0000084,7.65e-26,11;CL:0000827,7.65e-26,11;CL:0000791,1.06e-24,9;CL:0000789,1.06e-24,9;CL:0002420,1.06e-24,9;CL:0002419,1.06e-24,9;CL:0000790,1.06e-24,9;CL:0000738,8.71e-21,17;CL:0002087,8.71e-21,17;CL:0000624,1.27e-20,8;CL:0000988,1.73e-18,32;CL:0002032,1.73e-18,32;CL:0000037,1.73e-18,32;CL:0000837,1.73e-18,32;CL:0002031,8.74e-17,25;CL:0002320,1.45e-14,46;CL:0000134,1.45e-14,46;CL:0000893,1.01e-12,6;CL:0002489,1.01e-12,6;CL:0000898,1.01e-12,6;CL:0000809,1.01e-12,6;CL:0000810,1.01e-12,6;CL:0000895,1.01e-12,6;CL:0000808,1.01e-12,6;CL:0000894,1.01e-12,6;CL:0000806,1.01e-12,6;CL:0000807,1.01e-12,6;CL:0000805,1.01e-12,6;CL:0002425,1.01e-12,6;CL:0002436,1.01e-12,6;CL:0002427,1.01e-12,6;CL:0002428,1.01e-12,6;CL:0002429,1.01e-12,6;CL:0002433,1.01e-12,6;CL:0002431,1.01e-12,6;CL:0002432,1.01e-12,6;CL:0000219,4.31e-12,54;CL:0000034,1.90e-09,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.15e-15!23;UBERON:0000974!4.15e-15!23;UBERON:0004807!4.15e-15!23;UBERON:0005058!4.15e-15!23;UBERON:0003351!4.15e-15!23;UBERON:0009113!4.15e-15!23;UBERON:0003295!4.15e-15!23;UBERON:0009722!4.15e-15!23;UBERON:0005562!4.15e-15!23;UBERON:0007690!4.15e-15!23;UBERON:0006562!2.90e-14!24;UBERON:0003408!2.90e-14!24;UBERON:0001557!2.90e-14!24;UBERON:0001042!2.90e-14!24;UBERON:0008814!2.90e-14!24;UBERON:0009145!2.90e-14!24;UBERON:0000072!1.29e-13!27;UBERON:0002384!8.58e-12!46;UBERON:0002390!2.56e-11!45;UBERON:0003061!2.56e-11!45;UBERON:0004177!6.10e-11!29;UBERON:0000063!2.25e-10!35;UBERON:0002193!3.34e-10!48;UBERON:0003929!3.80e-10!55;UBERON:0002368!2.58e-09!60;UBERON:0000490!3.31e-08!66;UBERON:0002405!4.17e-08!70;UBERON:0002530!4.58e-08!65;UBERON:0005057!1.76e-07!51;UBERON:0000065!3.04e-07!41;UBERON:0001004!5.84e-07!42;UBERON:0005911!9.88e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.45e-14,46;UBERON:0002370,2.03e-11,23;UBERON:0000974,2.03e-11,23;UBERON:0004807,2.03e-11,23;UBERON:0005058,2.03e-11,23;UBERON:0003351,2.03e-11,23;UBERON:0009113,2.03e-11,23;UBERON:0003295,2.03e-11,23;UBERON:0009722,2.03e-11,23;UBERON:0005562,2.03e-11,23;UBERON:0007690,2.03e-11,23;UBERON:0006562,6.68e-11,24;UBERON:0003408,6.68e-11,24;UBERON:0001557,6.68e-11,24;UBERON:0001042,6.68e-11,24;UBERON:0008814,6.68e-11,24;UBERON:0009145,6.68e-11,24;UBERON:0000072,1.41e-09,27;UBERON:0000077,4.34e-09,35;UBERON:0004177,7.60e-09,29;UBERON:0005057,7.60e-09,29;UBERON:0007811,6.34e-07,36|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,2.32421982194837,5.77233760821834,1.63845168425395,0.68487187290202,0,10.6144452557348,3.4093956943409,0,0.404950534779652,0,1.10411757875383,0.548457734422955,0,0,0.297872853602656,1.30599894569468,0,0,0,0.430761996159075,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0.498703936075477,0,0,0.7813353445238,0,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,4.19456515144341,7.25362142011344,3.36093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,0,0,0.539703191637817,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,1.1981512450592,2.99951365496704,0.762421362438388,0.299581278809645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,2.20971958992012,6.29781535456461,2.48759952847963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0.25984164595559,0,0.79472541912506,0.721172697119813,0.590758108698309,0.706765149637033,0.457240839929999,1.20991422164209,1.26695244961678,1.34696578296461,1.63627663054197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr10:13702915..13702936,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2540 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:13702915..13702936,+ | |||
|id=chr10:13702915..13702936,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.30e-15!12;CL:0000542!1.35e-13!13;CL:0000051!1.35e-13!13;CL:0000084!1.57e-13!11;CL:0000827!1.57e-13!11;CL:0000988!5.66e-13!32;CL:0002032!5.66e-13!32;CL:0000037!5.66e-13!32;CL:0000566!5.66e-13!32;CL:0000837!5.66e-13!32;CL:0002320!8.58e-12!46;CL:0000134!8.58e-12!46;CL:0000063!2.15e-11!66;CL:0000791!2.79e-11!9;CL:0000789!2.79e-11!9;CL:0002420!2.79e-11!9;CL:0002419!2.79e-11!9;CL:0000790!2.79e-11!9;CL:0000624!7.43e-10!8;CL:0000738!1.20e-09!17;CL:0002087!1.20e-09!17;CL:0002031!2.20e-09!25;CL:0000219!4.65e-09!54;CL:0000893!5.01e-07!6;CL:0002489!5.01e-07!6;CL:0000898!5.01e-07!6;CL:0000809!5.01e-07!6;CL:0000810!5.01e-07!6;CL:0000895!5.01e-07!6;CL:0000808!5.01e-07!6;CL:0000894!5.01e-07!6;CL:0000806!5.01e-07!6;CL:0000807!5.01e-07!6;CL:0000805!5.01e-07!6;CL:0002425!5.01e-07!6;CL:0002436!5.01e-07!6;CL:0002427!5.01e-07!6;CL:0002428!5.01e-07!6;CL:0002429!5.01e-07!6;CL:0002433!5.01e-07!6;CL:0002431!5.01e-07!6;CL:0002432!5.01e-07!6;CL:0000034!7.33e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.91e-30,12;CL:0000542,1.47e-27,13;CL:0000051,1.47e-27,13;CL:0000084,7.65e-26,11;CL:0000827,7.65e-26,11;CL:0000791,1.06e-24,9;CL:0000789,1.06e-24,9;CL:0002420,1.06e-24,9;CL:0002419,1.06e-24,9;CL:0000790,1.06e-24,9;CL:0000738,8.71e-21,17;CL:0002087,8.71e-21,17;CL:0000624,1.27e-20,8;CL:0000988,1.73e-18,32;CL:0002032,1.73e-18,32;CL:0000037,1.73e-18,32;CL:0000837,1.73e-18,32;CL:0002031,8.74e-17,25;CL:0002320,1.45e-14,46;CL:0000134,1.45e-14,46;CL:0000893,1.01e-12,6;CL:0002489,1.01e-12,6;CL:0000898,1.01e-12,6;CL:0000809,1.01e-12,6;CL:0000810,1.01e-12,6;CL:0000895,1.01e-12,6;CL:0000808,1.01e-12,6;CL:0000894,1.01e-12,6;CL:0000806,1.01e-12,6;CL:0000807,1.01e-12,6;CL:0000805,1.01e-12,6;CL:0002425,1.01e-12,6;CL:0002436,1.01e-12,6;CL:0002427,1.01e-12,6;CL:0002428,1.01e-12,6;CL:0002429,1.01e-12,6;CL:0002433,1.01e-12,6;CL:0002431,1.01e-12,6;CL:0002432,1.01e-12,6;CL:0000219,4.31e-12,54;CL:0000034,1.90e-09,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.15e-15!23;UBERON:0000974!4.15e-15!23;UBERON:0004807!4.15e-15!23;UBERON:0005058!4.15e-15!23;UBERON:0003351!4.15e-15!23;UBERON:0009113!4.15e-15!23;UBERON:0003295!4.15e-15!23;UBERON:0009722!4.15e-15!23;UBERON:0005562!4.15e-15!23;UBERON:0007690!4.15e-15!23;UBERON:0006562!2.90e-14!24;UBERON:0003408!2.90e-14!24;UBERON:0001557!2.90e-14!24;UBERON:0001042!2.90e-14!24;UBERON:0008814!2.90e-14!24;UBERON:0009145!2.90e-14!24;UBERON:0000072!1.29e-13!27;UBERON:0002384!8.58e-12!46;UBERON:0002390!2.56e-11!45;UBERON:0003061!2.56e-11!45;UBERON:0004177!6.10e-11!29;UBERON:0000063!2.25e-10!35;UBERON:0002193!3.34e-10!48;UBERON:0003929!3.80e-10!55;UBERON:0002368!2.58e-09!60;UBERON:0000490!3.31e-08!66;UBERON:0002405!4.17e-08!70;UBERON:0002530!4.58e-08!65;UBERON:0005057!1.76e-07!51;UBERON:0000065!3.04e-07!41;UBERON:0001004!5.84e-07!42;UBERON:0005911!9.88e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.45e-14,46;UBERON:0002370,2.03e-11,23;UBERON:0000974,2.03e-11,23;UBERON:0004807,2.03e-11,23;UBERON:0005058,2.03e-11,23;UBERON:0003351,2.03e-11,23;UBERON:0009113,2.03e-11,23;UBERON:0003295,2.03e-11,23;UBERON:0009722,2.03e-11,23;UBERON:0005562,2.03e-11,23;UBERON:0007690,2.03e-11,23;UBERON:0006562,6.68e-11,24;UBERON:0003408,6.68e-11,24;UBERON:0001557,6.68e-11,24;UBERON:0001042,6.68e-11,24;UBERON:0008814,6.68e-11,24;UBERON:0009145,6.68e-11,24;UBERON:0000072,1.41e-09,27;UBERON:0000077,4.34e-09,35;UBERON:0004177,7.60e-09,29;UBERON:0005057,7.60e-09,29;UBERON:0007811,6.34e-07,36 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,2.32421982194837,5.77233760821834,1.63845168425395,0.68487187290202,0,10.6144452557348,3.4093956943409,0,0.404950534779652,0,1.10411757875383,0.548457734422955,0,0,0.297872853602656,1.30599894569468,0,0,0,0.430761996159075,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0.498703936075477,0,0,0.7813353445238,0,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,4.19456515144341,7.25362142011344,3.36093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,0,0,0.539703191637817,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,1.1981512450592,2.99951365496704,0.762421362438388,0.299581278809645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,2.20971958992012,6.29781535456461,2.48759952847963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0.25984164595559,0,0.79472541912506,0.721172697119813,0.590758108698309,0.706765149637033,0.457240839929999,1.20991422164209,1.26695244961678,1.34696578296461,1.63627663054197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr10:13702915..13702936,+ | |||
}} |
Revision as of 16:16, 12 September 2013
Short description: | p@chr10:13702915..13702936, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:13702915..13702936, + |
Coexpression cluster: | MCL_coexpression_mm9:2540 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.45e-14 | 46 |
thymus | 2.03e-11 | 23 |
neck | 2.03e-11 | 23 |
respiratory system epithelium | 2.03e-11 | 23 |
hemolymphoid system gland | 2.03e-11 | 23 |
pharyngeal epithelium | 2.03e-11 | 23 |
thymic region | 2.03e-11 | 23 |
pharyngeal gland | 2.03e-11 | 23 |
entire pharyngeal arch endoderm | 2.03e-11 | 23 |
thymus primordium | 2.03e-11 | 23 |
early pharyngeal endoderm | 2.03e-11 | 23 |
pharynx | 6.68e-11 | 24 |
gland of gut | 6.68e-11 | 24 |
upper respiratory tract | 6.68e-11 | 24 |
chordate pharynx | 6.68e-11 | 24 |
pharyngeal arch system | 6.68e-11 | 24 |
pharyngeal region of foregut | 6.68e-11 | 24 |
segment of respiratory tract | 1.41e-09 | 27 |
mixed endoderm/mesoderm-derived structure | 4.34e-09 | 35 |
hemopoietic organ | 7.60e-09 | 29 |
immune organ | 7.60e-09 | 29 |
craniocervical region | 6.34e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.