FFCP PHASE1:Mm9::chr10:80962395..80962415,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13611|HGNC=|MCL_coexpression_id=3|UniProt=Q9Z0L1|association_with_transcript=36bp_to_ENSMUST00000053646_5end|description=CAGE_peak_2_at_S1pr4_5end|id=chr10:80962395..80962415,-|ontology_enrichment_celltype=CL:0000988!1.27e-09!32;CL:0002032!1.27e-09!32;CL:0000037!1.27e-09!32;CL:0000566!1.27e-09!32;CL:0000837!1.27e-09!32;CL:0000838!7.80e-09!12;CL:0000084!4.64e-08!11;CL:0000827!4.64e-08!11;CL:0000542!9.18e-08!13;CL:0000051!9.18e-08!13;CL:0000791!3.90e-07!9;CL:0000789!3.90e-07!9;CL:0002420!3.90e-07!9;CL:0002419!3.90e-07!9;CL:0000790!3.90e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,3.25e-15,32;CL:0002032,3.25e-15,32;CL:0000037,3.25e-15,32;CL:0000837,3.25e-15,32;CL:0000838,1.28e-11,12;CL:0000542,1.53e-10,13;CL:0000051,1.53e-10,13;CL:0000084,3.41e-10,11;CL:0000827,3.41e-10,11;CL:0002031,2.31e-09,25;CL:0002320,6.37e-09,46;CL:0000134,6.37e-09,46;CL:0000791,2.29e-08,9;CL:0000789,2.29e-08,9;CL:0002420,2.29e-08,9;CL:0002419,2.29e-08,9;CL:0000790,2.29e-08,9;CL:0000738,1.61e-07,17;CL:0002087,1.61e-07,17;CL:0000624,5.80e-07,8;CL:0000219,7.52e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.37e-14!48;UBERON:0002390!7.53e-13!45;UBERON:0003061!7.53e-13!45;UBERON:0002405!8.44e-13!70;UBERON:0004177!1.74e-12!29;UBERON:0005057!2.10e-10!51;UBERON:0003408!1.06e-09!24;UBERON:0001004!2.45e-09!42;UBERON:0003104!3.17e-09!131;UBERON:0009142!3.17e-09!131;UBERON:0002370!3.50e-09!23;UBERON:0000974!3.50e-09!23;UBERON:0004807!3.50e-09!23;UBERON:0005058!3.50e-09!23;UBERON:0003351!3.50e-09!23;UBERON:0009113!3.50e-09!23;UBERON:0003295!3.50e-09!23;UBERON:0009722!3.50e-09!23;UBERON:0005562!3.50e-09!23;UBERON:0007690!3.50e-09!23;UBERON:0001041!6.15e-09!92;UBERON:0000065!7.16e-09!41;UBERON:0006562!1.81e-08!24;UBERON:0001557!1.81e-08!24;UBERON:0001042!1.81e-08!24;UBERON:0008814!1.81e-08!24;UBERON:0009145!1.81e-08!24;UBERON:0003081!9.34e-08!88;UBERON:0000077!1.47e-07!97;UBERON:0000926!2.38e-07!193;UBERON:0004120!2.38e-07!193;UBERON:0006603!2.38e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.28e-17,45;UBERON:0003061,2.28e-17,45;UBERON:0002193,2.99e-17,48;UBERON:0002405,2.99e-17,48;UBERON:0004177,3.06e-15,29;UBERON:0005057,3.06e-15,29;UBERON:0003408,9.04e-12,24;UBERON:0000077,1.00e-11,35;UBERON:0002370,7.33e-11,23;UBERON:0000974,7.33e-11,23;UBERON:0004807,7.33e-11,23;UBERON:0005058,7.33e-11,23;UBERON:0003351,7.33e-11,23;UBERON:0009113,7.33e-11,23;UBERON:0003295,7.33e-11,23;UBERON:0009722,7.33e-11,23;UBERON:0005562,7.33e-11,23;UBERON:0007690,7.33e-11,23;UBERON:0006562,2.97e-10,24;UBERON:0001557,2.97e-10,24;UBERON:0001042,2.97e-10,24;UBERON:0008814,2.97e-10,24;UBERON:0009145,2.97e-10,24;UBERON:0001004,3.86e-10,42;UBERON:0000065,2.14e-09,41;UBERON:0002384,6.37e-09,46;UBERON:0000072,1.04e-08,27;UBERON:0003081,8.76e-08,87;UBERON:0001041,2.91e-07,80|phase1_expression=0,0,0,0,0,0,0,21.3053483678601,1.12630977721333,0.936258105287974,1.71217968225505,0.8774937489487,13.353656934634,20.8934761781404,0.999329285446988,1.01237633694913,0.699561878128147,8.3597473819933,8.08975158273859,6.79023442876848,1.10556277196391,1.78723712161594,1.04479915655574,0.319984845586813,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,50.6423273191658,26.5654017138092,25.6526634547161,55.2937598749153,47.8131839470912,50.9785870682711,0,0,0,0,0,0,0,0,0,9.2280433331755,18.1340535502836,17.4768775554081,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.571301968807607,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0,0.302904773332736,0,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0.148442139064825,0,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0,3.5384422077995,0.485300549842228,1.54589062922275,0.969750506270444,0,0,0.209446706813455,0,3.95389910869537,7.19883277192089,4.06624726633807,0,0,0,0.173824320192276,0,0,0,0,2.48813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0,2.1066395619397,2.83082697826187,6.81992398549422,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.252946148497029,0.147610147979602,0,0.246794327843601,0,0,0.196558995113203,0.674586337154561,0,0.241177159752417,0.25462585178142,2.01387296215567,0.972811360650212,0.549122826376163,2.87536413054709,0.744281895337007,0.624075346229121,0.252578877947112,0,0,3.32555742299888,0,0,0,0.234690248288502,0,1.19021820443007,2.53673742215138,0.788175720530955,0.664394068946325,0.956728611944923,0.81931657357869,3.28101465545202,2.89298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0.913394847343798,0,0,0,0,0.161464426695906,0,0,0.164140899745061,0.291480836629851,0,3.2465467351592,1.44470807574256,0.925972636848558,1.31857919903284,2.32380187125743,4.80434163733698,5.60928818979723,7.27747552083022,7.04819866402561,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.259229946583586,1.86401793926078,0,0,0,0,0,0,0.234714477291508,0,0,0,0,2.52808896502543,0.405450430580328,0.410843828659309,0.51968329191118,1.07416017400489,2.18549490259391,2.40390899039938,1.9199638532695,2.01932899896295,1.905170166375,2.31900225814733,2.24153125701431,3.65604998233252,2.68816875017609,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.256100609619477,0.0574354689556133,0,0,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0.701794825336225,0,0,0.661774257358546,0.463735671240843|short_description=p2@S1pr4}} | ||
|EntrezGene=13611 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q9Z0L1 | |||
|association_with_transcript=36bp_to_ENSMUST00000053646_5end | |||
|description=CAGE_peak_2_at_S1pr4_5end | |||
|id=chr10:80962395..80962415,- | |||
|ontology_enrichment_celltype=CL:0000988!1.27e-09!32;CL:0002032!1.27e-09!32;CL:0000037!1.27e-09!32;CL:0000566!1.27e-09!32;CL:0000837!1.27e-09!32;CL:0000838!7.80e-09!12;CL:0000084!4.64e-08!11;CL:0000827!4.64e-08!11;CL:0000542!9.18e-08!13;CL:0000051!9.18e-08!13;CL:0000791!3.90e-07!9;CL:0000789!3.90e-07!9;CL:0002420!3.90e-07!9;CL:0002419!3.90e-07!9;CL:0000790!3.90e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.25e-15,32;CL:0002032,3.25e-15,32;CL:0000037,3.25e-15,32;CL:0000837,3.25e-15,32;CL:0000838,1.28e-11,12;CL:0000542,1.53e-10,13;CL:0000051,1.53e-10,13;CL:0000084,3.41e-10,11;CL:0000827,3.41e-10,11;CL:0002031,2.31e-09,25;CL:0002320,6.37e-09,46;CL:0000134,6.37e-09,46;CL:0000791,2.29e-08,9;CL:0000789,2.29e-08,9;CL:0002420,2.29e-08,9;CL:0002419,2.29e-08,9;CL:0000790,2.29e-08,9;CL:0000738,1.61e-07,17;CL:0002087,1.61e-07,17;CL:0000624,5.80e-07,8;CL:0000219,7.52e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.37e-14!48;UBERON:0002390!7.53e-13!45;UBERON:0003061!7.53e-13!45;UBERON:0002405!8.44e-13!70;UBERON:0004177!1.74e-12!29;UBERON:0005057!2.10e-10!51;UBERON:0003408!1.06e-09!24;UBERON:0001004!2.45e-09!42;UBERON:0003104!3.17e-09!131;UBERON:0009142!3.17e-09!131;UBERON:0002370!3.50e-09!23;UBERON:0000974!3.50e-09!23;UBERON:0004807!3.50e-09!23;UBERON:0005058!3.50e-09!23;UBERON:0003351!3.50e-09!23;UBERON:0009113!3.50e-09!23;UBERON:0003295!3.50e-09!23;UBERON:0009722!3.50e-09!23;UBERON:0005562!3.50e-09!23;UBERON:0007690!3.50e-09!23;UBERON:0001041!6.15e-09!92;UBERON:0000065!7.16e-09!41;UBERON:0006562!1.81e-08!24;UBERON:0001557!1.81e-08!24;UBERON:0001042!1.81e-08!24;UBERON:0008814!1.81e-08!24;UBERON:0009145!1.81e-08!24;UBERON:0003081!9.34e-08!88;UBERON:0000077!1.47e-07!97;UBERON:0000926!2.38e-07!193;UBERON:0004120!2.38e-07!193;UBERON:0006603!2.38e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.28e-17,45;UBERON:0003061,2.28e-17,45;UBERON:0002193,2.99e-17,48;UBERON:0002405,2.99e-17,48;UBERON:0004177,3.06e-15,29;UBERON:0005057,3.06e-15,29;UBERON:0003408,9.04e-12,24;UBERON:0000077,1.00e-11,35;UBERON:0002370,7.33e-11,23;UBERON:0000974,7.33e-11,23;UBERON:0004807,7.33e-11,23;UBERON:0005058,7.33e-11,23;UBERON:0003351,7.33e-11,23;UBERON:0009113,7.33e-11,23;UBERON:0003295,7.33e-11,23;UBERON:0009722,7.33e-11,23;UBERON:0005562,7.33e-11,23;UBERON:0007690,7.33e-11,23;UBERON:0006562,2.97e-10,24;UBERON:0001557,2.97e-10,24;UBERON:0001042,2.97e-10,24;UBERON:0008814,2.97e-10,24;UBERON:0009145,2.97e-10,24;UBERON:0001004,3.86e-10,42;UBERON:0000065,2.14e-09,41;UBERON:0002384,6.37e-09,46;UBERON:0000072,1.04e-08,27;UBERON:0003081,8.76e-08,87;UBERON:0001041,2.91e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,21.3053483678601,1.12630977721333,0.936258105287974,1.71217968225505,0.8774937489487,13.353656934634,20.8934761781404,0.999329285446988,1.01237633694913,0.699561878128147,8.3597473819933,8.08975158273859,6.79023442876848,1.10556277196391,1.78723712161594,1.04479915655574,0.319984845586813,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,50.6423273191658,26.5654017138092,25.6526634547161,55.2937598749153,47.8131839470912,50.9785870682711,0,0,0,0,0,0,0,0,0,9.2280433331755,18.1340535502836,17.4768775554081,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.571301968807607,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0,0.302904773332736,0,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0.148442139064825,0,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0,3.5384422077995,0.485300549842228,1.54589062922275,0.969750506270444,0,0,0.209446706813455,0,3.95389910869537,7.19883277192089,4.06624726633807,0,0,0,0.173824320192276,0,0,0,0,2.48813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0,2.1066395619397,2.83082697826187,6.81992398549422,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.252946148497029,0.147610147979602,0,0.246794327843601,0,0,0.196558995113203,0.674586337154561,0,0.241177159752417,0.25462585178142,2.01387296215567,0.972811360650212,0.549122826376163,2.87536413054709,0.744281895337007,0.624075346229121,0.252578877947112,0,0,3.32555742299888,0,0,0,0.234690248288502,0,1.19021820443007,2.53673742215138,0.788175720530955,0.664394068946325,0.956728611944923,0.81931657357869,3.28101465545202,2.89298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0.913394847343798,0,0,0,0,0.161464426695906,0,0,0.164140899745061,0.291480836629851,0,3.2465467351592,1.44470807574256,0.925972636848558,1.31857919903284,2.32380187125743,4.80434163733698,5.60928818979723,7.27747552083022,7.04819866402561,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.259229946583586,1.86401793926078,0,0,0,0,0,0,0.234714477291508,0,0,0,0,2.52808896502543,0.405450430580328,0.410843828659309,0.51968329191118,1.07416017400489,2.18549490259391,2.40390899039938,1.9199638532695,2.01932899896295,1.905170166375,2.31900225814733,2.24153125701431,3.65604998233252,2.68816875017609,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.256100609619477,0.0574354689556133,0,0,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0.701794825336225,0,0,0.661774257358546,0.463735671240843 | |||
|short_description=p2@S1pr4 | |||
}} |
Revision as of 17:44, 12 September 2013
Short description: | p2@S1pr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_S1pr4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 36bp_to_ENSMUST00000053646_5end |
EntrezGene: | S1pr4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.25e-15 | 32 |
hematopoietic oligopotent progenitor cell | 3.25e-15 | 32 |
hematopoietic stem cell | 3.25e-15 | 32 |
hematopoietic multipotent progenitor cell | 3.25e-15 | 32 |
lymphoid lineage restricted progenitor cell | 1.28e-11 | 12 |
lymphocyte | 1.53e-10 | 13 |
common lymphoid progenitor | 1.53e-10 | 13 |
T cell | 3.41e-10 | 11 |
pro-T cell | 3.41e-10 | 11 |
hematopoietic lineage restricted progenitor cell | 2.31e-09 | 25 |
connective tissue cell | 6.37e-09 | 46 |
mesenchymal cell | 6.37e-09 | 46 |
mature alpha-beta T cell | 2.29e-08 | 9 |
alpha-beta T cell | 2.29e-08 | 9 |
immature T cell | 2.29e-08 | 9 |
mature T cell | 2.29e-08 | 9 |
immature alpha-beta T cell | 2.29e-08 | 9 |
leukocyte | 1.61e-07 | 17 |
nongranular leukocyte | 1.61e-07 | 17 |
CD4-positive, alpha-beta T cell | 5.80e-07 | 8 |
motile cell | 7.52e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.28e-17 | 45 |
blood island | 2.28e-17 | 45 |
hemolymphoid system | 2.99e-17 | 48 |
immune system | 2.99e-17 | 48 |
hemopoietic organ | 3.06e-15 | 29 |
immune organ | 3.06e-15 | 29 |
gland of gut | 9.04e-12 | 24 |
mixed endoderm/mesoderm-derived structure | 1.00e-11 | 35 |
thymus | 7.33e-11 | 23 |
neck | 7.33e-11 | 23 |
respiratory system epithelium | 7.33e-11 | 23 |
hemolymphoid system gland | 7.33e-11 | 23 |
pharyngeal epithelium | 7.33e-11 | 23 |
thymic region | 7.33e-11 | 23 |
pharyngeal gland | 7.33e-11 | 23 |
entire pharyngeal arch endoderm | 7.33e-11 | 23 |
thymus primordium | 7.33e-11 | 23 |
early pharyngeal endoderm | 7.33e-11 | 23 |
pharynx | 2.97e-10 | 24 |
upper respiratory tract | 2.97e-10 | 24 |
chordate pharynx | 2.97e-10 | 24 |
pharyngeal arch system | 2.97e-10 | 24 |
pharyngeal region of foregut | 2.97e-10 | 24 |
respiratory system | 3.86e-10 | 42 |
respiratory tract | 2.14e-09 | 41 |
connective tissue | 6.37e-09 | 46 |
segment of respiratory tract | 1.04e-08 | 27 |
lateral plate mesoderm | 8.76e-08 | 87 |
foregut | 2.91e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.