FFCP PHASE1:Hg19::chr2:27632357..27632383,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5496|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9278|TSSclassifier=S|UniProt=|association_with_transcript=38bp_to_ENST00000472077_5end|coexpression_cluster_id=C1|description=CAGE_peak_3_at_PPM1G_5end|id=chr2:27632357..27632383,-|ontology_enrichment_celltype=CL:0000066!2.48e-12!254|ontology_enrichment_celltype_v019=CL:0000082;1.65e-07;19|ontology_enrichment_celltype_v019_2=CL:0000066,1.05e-09,253;CL:0000082,1.03e-07,19|ontology_enrichment_development_v019=UBERON:0008947;6.71e-14;29!UBERON:0001041;2.62e-08;30|ontology_enrichment_disease=DOID:162!6.09e-25!235;DOID:14566!6.62e-24!239;DOID:305!1.06e-19!106;DOID:0050687!2.25e-19!143;DOID:0050686!2.01e-10!137|ontology_enrichment_disease_v019=DOID:1324;1.12e-07;15!DOID:0050615;3.96e-07;16|ontology_enrichment_disease_v019_2=DOID:305,4.11e-15,106;DOID:162,4.78e-15,235;DOID:14566,1.80e-14,239;DOID:0050687,1.07e-13,143;DOID:1324,7.26e-08,15;DOID:0050615,2.65e-07,16|ontology_enrichment_uberon=UBERON:0004921!6.11e-07!129;UBERON:0004185!6.11e-07!129;UBERON:0001007!6.76e-07!155;UBERON:0001555!6.76e-07!155;UBERON:0007026!6.76e-07!155|ontology_enrichment_uberon_v019=UBERON:0001737;1.28e-12;9!UBERON:0001557;1.28e-12;9!UBERON:0000072;1.31e-12;37!UBERON:0000065;4.54e-09;44!UBERON:0004802;1.65e-07;19!UBERON:0000115;1.65e-07;19!UBERON:0005911;2.11e-07;36|ontology_enrichment_uberon_v019_2=UBERON:0008947,1.74e-13,38;UBERON:0003258,1.74e-13,38;UBERON:0001737,1.07e-12,9;UBERON:0001041,7.11e-11,87;UBERON:0000072,3.89e-10,47;UBERON:0004921,1.02e-08,118;UBERON:0005177,1.27e-08,101;UBERON:0000065,2.51e-08,54;UBERON:0004802,1.03e-07,19;UBERON:0000115,1.03e-07,19;UBERON:0009569,2.64e-07,112;UBERON:0001048,7.62e-07,160|phase1_expression=0,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0.491467873003018,2.09340350391728,0.873765488520689,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0,0.410623275218653,0.251085279189606,0.305653622991805,0.410502947249729,0.629686250509434,0,0.767658796194425,0.154816123316076,0,0.90361775633475,1.47901604066715,2.32401601740905,1.27952309238679,0.293600439334847,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,0,0.502497330513487,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0.616804496998528,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0.541607727530031,0.640456598628376,0.260118695119756,0.657751618414705,0,0.579606171470105,0,0,0,0.566546713487831,0,0.68725489096526,0,0,0,0,0.301150238155546,0,0,0,0.821127996921047,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0,0.189069634328136,0,0.43917392846563,23.6417231273371,0.364295288292542,0.741568885568859,0,0.348259474598534,0.26591592103773,0,0,0.371457501329565,0.39752481473341,0,0.694281003215189,0,0,0.550236083880135,0.626984899610432,0,0,0,0,1.52054421143703,0,0.735326160691737,0,0.625098097988558,0.22452937262617,0.900891843866578,0,0,1.09921046358244,0,0,0.872188104285069,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0.454072282934794,0.576175924479999,0,0,0.570471821544449,0.149448680551801,0.469737994575059,0.323745888736263,0.140450806702248,0.204154171254893,0.61417158655884,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0.375355559615893,0.554128230968366,0,0,0.150238058906597,0.226864366320042,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0.403008392910561,0.169560592310488,0.193260853163297,0.818238361772504,0.860413786167011,0.853815942907168,1.19276791489337,0.348581828608555,0.10366105501537,1.26160425437814,0.72995471815166,0,0,0,0,0,1.18306800039844,1.01150814046861,1.68707720918437,0.661763836394364,1.52515610864684,0.949082476444386,1.48314438976181,1.17732879075208,1.53898862778556,1.4763109092493,1.40241773803446,0,0,0,0,0,0.441463099414651,0.737930631258681,0,0.219500570817251,0,0.603173834469785,0,2.28065813717227,0,0,0.231860809950154,0,0.433099343283221,0.925971025153221,0,1.58040879591855,0.858486162094873,0.246217006087397,0.234004265139238,0.297262324577456,0,0.16798212819886,0.283550194484773,0.179117045405697,0.871901815541886,1.53353071666084,0.492663237895943,0.176096868026452,0.207328115540772,0,0,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,0.336393253036082,0.87192013766656,0.36669142910475,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0,0,1.42636905040718,0,0.61642896765115,0,0.672510863961164,0.3940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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5496 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9278 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=38bp_to_ENST00000472077_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_PPM1G_5end | |||
|id=chr2:27632357..27632383,- | |||
|ontology_enrichment_celltype=CL:0000066!2.48e-12!254 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.65e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.05e-09,253;CL:0000082,1.03e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.71e-14;29!UBERON:0001041;2.62e-08;30 | |||
|ontology_enrichment_disease=DOID:162!6.09e-25!235;DOID:14566!6.62e-24!239;DOID:305!1.06e-19!106;DOID:0050687!2.25e-19!143;DOID:0050686!2.01e-10!137 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.12e-07;15!DOID:0050615;3.96e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.11e-15,106;DOID:162,4.78e-15,235;DOID:14566,1.80e-14,239;DOID:0050687,1.07e-13,143;DOID:1324,7.26e-08,15;DOID:0050615,2.65e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004921!6.11e-07!129;UBERON:0004185!6.11e-07!129;UBERON:0001007!6.76e-07!155;UBERON:0001555!6.76e-07!155;UBERON:0007026!6.76e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.28e-12;9!UBERON:0001557;1.28e-12;9!UBERON:0000072;1.31e-12;37!UBERON:0000065;4.54e-09;44!UBERON:0004802;1.65e-07;19!UBERON:0000115;1.65e-07;19!UBERON:0005911;2.11e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,1.74e-13,38;UBERON:0003258,1.74e-13,38;UBERON:0001737,1.07e-12,9;UBERON:0001041,7.11e-11,87;UBERON:0000072,3.89e-10,47;UBERON:0004921,1.02e-08,118;UBERON:0005177,1.27e-08,101;UBERON:0000065,2.51e-08,54;UBERON:0004802,1.03e-07,19;UBERON:0000115,1.03e-07,19;UBERON:0009569,2.64e-07,112;UBERON:0001048,7.62e-07,160 | |||
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| |||
|short_description=p3@PPM1G | |||
}} |
Revision as of 18:07, 12 September 2013
Short description: | p3@PPM1G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PPM1G_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 38bp_to_ENST00000472077_5end |
EntrezGene: | PPM1G |
HGNC: | 9278 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.05e-09 | 253 |
epithelial cell of lung | 1.03e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 1.74e-13 | 38 |
endoderm of foregut | 1.74e-13 | 38 |
larynx | 1.07e-12 | 9 |
foregut | 7.11e-11 | 87 |
segment of respiratory tract | 3.89e-10 | 47 |
subdivision of digestive tract | 1.02e-08 | 118 |
trunk region element | 1.27e-08 | 101 |
respiratory tract | 2.51e-08 | 54 |
respiratory tract epithelium | 1.03e-07 | 19 |
lung epithelium | 1.03e-07 | 19 |
subdivision of trunk | 2.64e-07 | 112 |
primordium | 7.62e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.11e-15 | 106 |
cancer | 4.78e-15 | 235 |
disease of cellular proliferation | 1.80e-14 | 239 |
cell type cancer | 1.07e-13 | 143 |
lung cancer | 7.26e-08 | 15 |
respiratory system cancer | 2.65e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.