FFCP PHASE1:Hg19::chr2:74782818..74782845,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84695|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13869|TSSclassifier=S|UniProt=C9J5M1|association_with_transcript=-1bp_to_ENST00000413469_5end|coexpression_cluster_id=C294|description=CAGE_peak_3_at_LOXL3_5end|id=chr2:74782818..74782845,-|ontology_enrichment_celltype=CL:0000763!4.51e-45!112;CL:0000049!4.51e-45!112;CL:0000766!1.48e-43!76;CL:0000557!3.19e-41!71;CL:0002009!3.98e-39!65;CL:0000839!4.48e-38!70;CL:0002194!1.11e-37!63;CL:0000576!1.11e-37!63;CL:0000040!1.11e-37!63;CL:0000559!1.11e-37!63;CL:0002057!2.62e-31!42;CL:0000037!3.28e-29!172;CL:0000566!3.28e-29!172;CL:0000860!7.22e-28!45;CL:0002032!2.36e-27!165;CL:0000837!2.36e-27!165;CL:0000988!1.48e-26!182;CL:0000738!8.46e-25!140;CL:0002031!7.94e-20!124;CL:0002087!6.99e-19!119;CL:0002320!2.06e-10!365;CL:0000134!4.05e-10!358;CL:0002393!2.05e-09!9;CL:0002397!2.05e-09!9;CL:0000219!8.14e-07!390|ontology_enrichment_celltype_v019=CL:0000473;1.16e-37;39!CL:0000234;1.16e-37;39!CL:0000576;1.41e-36;48!CL:0000860;1.96e-35;33!CL:0002057;1.96e-35;33!CL:0000766;8.94e-31;69!CL:0000763;6.65e-17;100!CL:0000235;7.72e-11;6!CL:0002393;2.48e-10;6!CL:0002397;2.48e-10;6!CL:0000738;2.03e-09;136!CL:0000094;4.27e-09;8!CL:0002087;2.35e-08;104!CL:0000840;5.48e-07;5!CL:0000988;5.69e-07;177|ontology_enrichment_celltype_v019_2=CL:0000766,1.77e-72,72;CL:0002009,2.20e-71,61;CL:0002194,7.07e-69,59;CL:0000576,7.07e-69,59;CL:0000040,7.07e-69,59;CL:0000559,7.07e-69,59;CL:0000557,4.90e-68,67;CL:0000473,1.03e-62,48;CL:0000234,1.03e-62,48;CL:0000839,1.25e-61,66;CL:0000763,2.44e-58,108;CL:0000049,2.44e-58,108;CL:0000860,4.35e-53,42;CL:0002057,4.35e-53,42;CL:0000738,1.86e-37,136;CL:0000037,6.92e-35,168;CL:0002032,1.91e-32,161;CL:0000837,1.91e-32,161;CL:0000988,7.01e-32,177;CL:0002087,1.38e-31,115;CL:0002031,4.64e-29,120;CL:0002393,5.56e-15,9;CL:0002397,5.56e-15,9;CL:0000235,7.93e-11,6;CL:0000134,9.11e-10,354;CL:0002320,3.70e-09,361;CL:0000094,5.10e-09,8;CL:0000219,4.43e-07,386;CL:0000840,5.65e-07,5;CL:0001029,5.65e-07,5|ontology_enrichment_development_v019=CL:0002057;1.29e-37;42!CL:0000049;3.70e-16;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.22e-46!102;UBERON:0003061!4.22e-46!102;UBERON:0002193!3.81e-41!112;UBERON:0002371!1.54e-39!80;UBERON:0001474!3.34e-36!86;UBERON:0004765!1.06e-29!101;UBERON:0001434!1.06e-29!101;UBERON:0002405!4.97e-27!115;UBERON:0007023!2.77e-25!115;UBERON:0002204!3.94e-14!167;UBERON:0003081!1.50e-13!216;UBERON:0002384!1.19e-10!375;UBERON:0000479!8.68e-09!787;UBERON:0001049!9.34e-09!57;UBERON:0005068!9.34e-09!57;UBERON:0006241!9.34e-09!57;UBERON:0007135!9.34e-09!57;UBERON:0000178!5.41e-07!15;UBERON:0000179!5.41e-07!15;UBERON:0000463!5.41e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;8.86e-11;15!UBERON:0000179;8.86e-11;15!UBERON:0000463;8.86e-11;15!UBERON:0002390;2.94e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.00e-68,98;UBERON:0003061,6.00e-68,98;UBERON:0002193,1.99e-61,108;UBERON:0002371,1.62e-59,76;UBERON:0001474,5.10e-56,82;UBERON:0002405,1.22e-50,93;UBERON:0004765,3.23e-49,90;UBERON:0001434,9.41e-44,100;UBERON:0003081,1.11e-26,203;UBERON:0002204,1.56e-22,167;UBERON:0007023,8.32e-12,114;UBERON:0000926,3.04e-11,315;UBERON:0004120,3.04e-11,315;UBERON:0006603,3.04e-11,315;UBERON:0000178,8.67e-11,15;UBERON:0000179,8.67e-11,15;UBERON:0000463,8.67e-11,15;UBERON:0002384,1.12e-09,371;UBERON:0000479,9.03e-07,773|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,1.34465029290355,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,5.11373559903575,3.0706351847777,6.19264493264304,0,0,0,0,0,0.587200878669695,6.09394949385065,7.01905566145496,5.64228263861215,31.1242509193495,17.8141516310439,30.9090681161024,11.0502661472469,4.91238726795452,6.54976965207104,2.78914844286822,3.70051099219643,5.26500830521676,4.89077066947656,2.56160706529101,4.02019790810595,6.20542225325913,1.29096936716765,2.70852973188684,4.51781614902251,2.72906150057846,1.79778787556068,4.28517449319264,3.20929027076094,3.19668562899521,7.25672860410775,5.18605509816243,5.54092175692502,2.03146467040009,0,2.4912889959823,4.01997864410789,4.17186334736161,5.42972111762792,6.65939452896706,1.84138817993782,3.16462387440884,14.365359469212,15.7327181974132,11.5312255029607,7.52601828681517,9.31096735617339,6.42902346788321,19.3808665744049,21.4830011375017,13.6998115323475,0,0,0,0.853460445133014,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0.895906278080929,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,1.30361867064741,0.795285947051099,1.45990461090791,0.0945348171640679,0,0.087834785693126,1.70272798147026,0,0,14.2800853208061,21.4179576878099,16.3538291438204,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95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189638,0.645499848534087,0,0,0,0,0,0,1.22241444182866,0.406896178315738,0,1.00636896795513,0.320568492303233|short_description=p3@LOXL3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=84695 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13869 | |||
|TSSclassifier=S | |||
|UniProt=C9J5M1 | |||
|association_with_transcript=-1bp_to_ENST00000413469_5end | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_3_at_LOXL3_5end | |||
|id=chr2:74782818..74782845,- | |||
|ontology_enrichment_celltype=CL:0000763!4.51e-45!112;CL:0000049!4.51e-45!112;CL:0000766!1.48e-43!76;CL:0000557!3.19e-41!71;CL:0002009!3.98e-39!65;CL:0000839!4.48e-38!70;CL:0002194!1.11e-37!63;CL:0000576!1.11e-37!63;CL:0000040!1.11e-37!63;CL:0000559!1.11e-37!63;CL:0002057!2.62e-31!42;CL:0000037!3.28e-29!172;CL:0000566!3.28e-29!172;CL:0000860!7.22e-28!45;CL:0002032!2.36e-27!165;CL:0000837!2.36e-27!165;CL:0000988!1.48e-26!182;CL:0000738!8.46e-25!140;CL:0002031!7.94e-20!124;CL:0002087!6.99e-19!119;CL:0002320!2.06e-10!365;CL:0000134!4.05e-10!358;CL:0002393!2.05e-09!9;CL:0002397!2.05e-09!9;CL:0000219!8.14e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.16e-37;39!CL:0000234;1.16e-37;39!CL:0000576;1.41e-36;48!CL:0000860;1.96e-35;33!CL:0002057;1.96e-35;33!CL:0000766;8.94e-31;69!CL:0000763;6.65e-17;100!CL:0000235;7.72e-11;6!CL:0002393;2.48e-10;6!CL:0002397;2.48e-10;6!CL:0000738;2.03e-09;136!CL:0000094;4.27e-09;8!CL:0002087;2.35e-08;104!CL:0000840;5.48e-07;5!CL:0000988;5.69e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.77e-72,72;CL:0002009,2.20e-71,61;CL:0002194,7.07e-69,59;CL:0000576,7.07e-69,59;CL:0000040,7.07e-69,59;CL:0000559,7.07e-69,59;CL:0000557,4.90e-68,67;CL:0000473,1.03e-62,48;CL:0000234,1.03e-62,48;CL:0000839,1.25e-61,66;CL:0000763,2.44e-58,108;CL:0000049,2.44e-58,108;CL:0000860,4.35e-53,42;CL:0002057,4.35e-53,42;CL:0000738,1.86e-37,136;CL:0000037,6.92e-35,168;CL:0002032,1.91e-32,161;CL:0000837,1.91e-32,161;CL:0000988,7.01e-32,177;CL:0002087,1.38e-31,115;CL:0002031,4.64e-29,120;CL:0002393,5.56e-15,9;CL:0002397,5.56e-15,9;CL:0000235,7.93e-11,6;CL:0000134,9.11e-10,354;CL:0002320,3.70e-09,361;CL:0000094,5.10e-09,8;CL:0000219,4.43e-07,386;CL:0000840,5.65e-07,5;CL:0001029,5.65e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-37;42!CL:0000049;3.70e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.22e-46!102;UBERON:0003061!4.22e-46!102;UBERON:0002193!3.81e-41!112;UBERON:0002371!1.54e-39!80;UBERON:0001474!3.34e-36!86;UBERON:0004765!1.06e-29!101;UBERON:0001434!1.06e-29!101;UBERON:0002405!4.97e-27!115;UBERON:0007023!2.77e-25!115;UBERON:0002204!3.94e-14!167;UBERON:0003081!1.50e-13!216;UBERON:0002384!1.19e-10!375;UBERON:0000479!8.68e-09!787;UBERON:0001049!9.34e-09!57;UBERON:0005068!9.34e-09!57;UBERON:0006241!9.34e-09!57;UBERON:0007135!9.34e-09!57;UBERON:0000178!5.41e-07!15;UBERON:0000179!5.41e-07!15;UBERON:0000463!5.41e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.86e-11;15!UBERON:0000179;8.86e-11;15!UBERON:0000463;8.86e-11;15!UBERON:0002390;2.94e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.00e-68,98;UBERON:0003061,6.00e-68,98;UBERON:0002193,1.99e-61,108;UBERON:0002371,1.62e-59,76;UBERON:0001474,5.10e-56,82;UBERON:0002405,1.22e-50,93;UBERON:0004765,3.23e-49,90;UBERON:0001434,9.41e-44,100;UBERON:0003081,1.11e-26,203;UBERON:0002204,1.56e-22,167;UBERON:0007023,8.32e-12,114;UBERON:0000926,3.04e-11,315;UBERON:0004120,3.04e-11,315;UBERON:0006603,3.04e-11,315;UBERON:0000178,8.67e-11,15;UBERON:0000179,8.67e-11,15;UBERON:0000463,8.67e-11,15;UBERON:0002384,1.12e-09,371;UBERON:0000479,9.03e-07,773 | |||
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| |||
|short_description=p3@LOXL3 | |||
}} |
Revision as of 19:50, 12 September 2013
Short description: | p3@LOXL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LOXL3_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | -1bp_to_ENST00000413469_5end |
EntrezGene: | LOXL3 |
HGNC: | 13869 |
UniProt: | C9J5M1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.00e-68 | 98 |
blood island | 6.00e-68 | 98 |
hemolymphoid system | 1.99e-61 | 108 |
bone marrow | 1.62e-59 | 76 |
bone element | 5.10e-56 | 82 |
immune system | 1.22e-50 | 93 |
skeletal element | 3.23e-49 | 90 |
skeletal system | 9.41e-44 | 100 |
lateral plate mesoderm | 1.11e-26 | 203 |
musculoskeletal system | 1.56e-22 | 167 |
adult organism | 8.32e-12 | 114 |
mesoderm | 3.04e-11 | 315 |
mesoderm-derived structure | 3.04e-11 | 315 |
presumptive mesoderm | 3.04e-11 | 315 |
blood | 8.67e-11 | 15 |
haemolymphatic fluid | 8.67e-11 | 15 |
organism substance | 8.67e-11 | 15 |
connective tissue | 1.12e-09 | 371 |
tissue | 9.03e-07 | 773 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.