Personal tools

FFCP PHASE1:Mm9::chr11:62389483..62389494,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=22368|HGNC=|UniProt=|association_with_transcript=7bp_to_uc007jjj.1,uc011xwb.1_5end|description=CAGE_peak_6_at_Trpv2_5end|id=chr11:62389483..62389494,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000839,1.59e-08,13;CL:0000050,5.09e-08,9;CL:0000553,9.39e-08,6;CL:0000556,9.39e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.97e-09!75;UBERON:0001016!6.97e-09!75;UBERON:0001049!8.96e-09!52;UBERON:0005068!8.96e-09!52;UBERON:0006241!8.96e-09!52;UBERON:0007135!8.96e-09!52;UBERON:0001017!9.97e-09!73;UBERON:0005743!9.97e-09!73;UBERON:0002346!4.56e-08!71;UBERON:0003075!4.56e-08!71;UBERON:0007284!4.56e-08!71;UBERON:0004121!8.63e-08!102;UBERON:0000924!8.63e-08!102;UBERON:0006601!8.63e-08!102;UBERON:0000955!1.28e-07!50;UBERON:0006238!1.28e-07!50;UBERON:0002616!1.81e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.78e-11,54;UBERON:0001049,6.72e-11,52;UBERON:0005068,6.72e-11,52;UBERON:0006241,6.72e-11,52;UBERON:0007135,6.72e-11,52;UBERON:0002021,6.87e-10,10;UBERON:0000411,6.87e-10,10;UBERON:0001950,6.87e-10,10;UBERON:0003076,5.05e-09,12;UBERON:0003057,5.05e-09,12;UBERON:0001016,1.31e-08,75;UBERON:0001017,2.53e-08,73;UBERON:0002616,6.51e-08,46;UBERON:0002020,9.71e-08,34;UBERON:0000955,1.27e-07,47;UBERON:0006238,1.27e-07,47;UBERON:0002346,1.70e-07,64;UBERON:0003075,1.70e-07,64;UBERON:0007284,1.70e-07,64;UBERON:0002371,4.36e-07,16|phase1_expression=0.160148847104794,0,0,0,0,0,0.700837921786577,0.258246646883153,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.174840804837995,4.33042690360362,5.26435695213547,4.19737126876888,1.10411757875383,2.05671650408608,1.69755860719212,0.595303031057488,1.88652807281682,3.39559725880616,0.47997726838022,0.45881856213434,0,0,0,0,0,0,1.90509202037889,1.23012957516914,0,0,0,0,2.51118978442145,3.906676722619,0.523523743973798,2.94115744015507,4.78131839470912,1.94204141212461,0,0,0.367093504323363,2.34717403304412,0,0.219686182734472,0.194429899074283,0.839918529752175,1.43752564364972,3.18786951509699,0.725362142011344,0,0.771778308107841,0.286533439938757,0,1.41621522601718,0,0,2.71075625655306,0,4.94944844504769,0.988866362566974,3.5524005747305,0.299600110518405,0,0,0,0,3.71346279724945,1.32521124570968,0,0.191690942036473,0,1.10115880999389,2.042997409363,0.768032666281217,0.923204014111357,0.914876436024097,0.52091337055676,0.279182999001381,1.68828783009504,2.13917546887534,1.17851434189467,2.56269025438385,0.745597783301202,0.151452386666368,1.51143120213571,1.15945795480671,0,0,0,0,0,0.280888840263504,0.681721290312231,1.03914401841148,3.18005617059306,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.258937883647172,1.03909497345377,0.173485326766136,0.304465478312141,0.461230994512117,0.60289056221049,0.470354828542819,0,0.741584903203122,0.144599356919912,0,0.647067399789637,0.883366073841574,0.484875253135222,0,3.51336956413857,4.1889341362691,0.766371165625774,0.599075622529601,0,1.27070227073065,1.9472783122627,1.37250180845588,0.502617408451458,3.12883776346098,2.81287003063364,1.66230435647648,1.62241263067758,0.203678727700633,0.995255764880744,0,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.340182495756639,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0.556094498451196,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0,0,0.540186184383045,0,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0.162137619091711,0.877199924551994,0.439100230582101,0.134206418760372,1.47202963994889,0.720332286654991,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.597423819763102,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.786235980452812,0.674586337154561,0.405720242777006,0,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0.744281895337007,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.637819074629948,0.327726629431476,0.690739927463582,0.578596234326046,9.04747703635634,3.80733978673097,0,0,1.60550589987792,2.46144541843627,0,1.26235463602186,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.584511715822624,0,0.642642632843614,0.141940085208269,0,0,0.329940245945071,0,0,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0.658196082408484,0.913394847343798,9.62154003061212,5.2958017715955,0.882113592219848,0.49465875882444,0.645857706783622,0.301564624640779,0.358117032009409,0.984845398470368,0,3.33765543618917,3.07567585436135,0,1.11116716421827,2.44878994106098,2.46049609897845,4.57556346413045,0,0.279902904647316,0.552799895217695,0,0,0,0.648032044930808,0,0.218362563746178,0.674321731924103,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0,0.308132871494482,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.738447635872886,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0.233753804363138,0,1.55390167361845,2.9605572681127,8.562115434568,0.772758376128762,1.12609485270709,0.73260649706906,0.214368379079066,0,1.6942555278512,1.38097570952153,2.29158205375759,2.92150409984269,0.685082519770642,4.5323633843382,2.70009000092722,4.5032120322422,4.53142408984205,4.14208249401456,0,0,0,0.486213434136588,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.192075457214608,0.402048282689293,0,0.347652977834566,0,0.824171801606613,0.883193520806384,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.470546902076653,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0.788035859004508,0,0.309873682371932,0.192906610981141,1.49886346762768,0,1.07435527024149,1.3390183244819,0.661774257358546,0.695603506861264|short_description=p6@Trpv2}}
|EntrezGene=22368
|HGNC=
|UniProt=
|association_with_transcript=7bp_to_uc007jjj.1,uc011xwb.1_5end
|description=CAGE_peak_6_at_Trpv2_5end
|id=chr11:62389483..62389494,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000839,1.59e-08,13;CL:0000050,5.09e-08,9;CL:0000553,9.39e-08,6;CL:0000556,9.39e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.97e-09!75;UBERON:0001016!6.97e-09!75;UBERON:0001049!8.96e-09!52;UBERON:0005068!8.96e-09!52;UBERON:0006241!8.96e-09!52;UBERON:0007135!8.96e-09!52;UBERON:0001017!9.97e-09!73;UBERON:0005743!9.97e-09!73;UBERON:0002346!4.56e-08!71;UBERON:0003075!4.56e-08!71;UBERON:0007284!4.56e-08!71;UBERON:0004121!8.63e-08!102;UBERON:0000924!8.63e-08!102;UBERON:0006601!8.63e-08!102;UBERON:0000955!1.28e-07!50;UBERON:0006238!1.28e-07!50;UBERON:0002616!1.81e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.78e-11,54;UBERON:0001049,6.72e-11,52;UBERON:0005068,6.72e-11,52;UBERON:0006241,6.72e-11,52;UBERON:0007135,6.72e-11,52;UBERON:0002021,6.87e-10,10;UBERON:0000411,6.87e-10,10;UBERON:0001950,6.87e-10,10;UBERON:0003076,5.05e-09,12;UBERON:0003057,5.05e-09,12;UBERON:0001016,1.31e-08,75;UBERON:0001017,2.53e-08,73;UBERON:0002616,6.51e-08,46;UBERON:0002020,9.71e-08,34;UBERON:0000955,1.27e-07,47;UBERON:0006238,1.27e-07,47;UBERON:0002346,1.70e-07,64;UBERON:0003075,1.70e-07,64;UBERON:0007284,1.70e-07,64;UBERON:0002371,4.36e-07,16
|phase1_expression=0.160148847104794,0,0,0,0,0,0.700837921786577,0.258246646883153,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.174840804837995,4.33042690360362,5.26435695213547,4.19737126876888,1.10411757875383,2.05671650408608,1.69755860719212,0.595303031057488,1.88652807281682,3.39559725880616,0.47997726838022,0.45881856213434,0,0,0,0,0,0,1.90509202037889,1.23012957516914,0,0,0,0,2.51118978442145,3.906676722619,0.523523743973798,2.94115744015507,4.78131839470912,1.94204141212461,0,0,0.367093504323363,2.34717403304412,0,0.219686182734472,0.194429899074283,0.839918529752175,1.43752564364972,3.18786951509699,0.725362142011344,0,0.771778308107841,0.286533439938757,0,1.41621522601718,0,0,2.71075625655306,0,4.94944844504769,0.988866362566974,3.5524005747305,0.299600110518405,0,0,0,0,3.71346279724945,1.32521124570968,0,0.191690942036473,0,1.10115880999389,2.042997409363,0.768032666281217,0.923204014111357,0.914876436024097,0.52091337055676,0.279182999001381,1.68828783009504,2.13917546887534,1.17851434189467,2.56269025438385,0.745597783301202,0.151452386666368,1.51143120213571,1.15945795480671,0,0,0,0,0,0.280888840263504,0.681721290312231,1.03914401841148,3.18005617059306,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.258937883647172,1.03909497345377,0.173485326766136,0.304465478312141,0.461230994512117,0.60289056221049,0.470354828542819,0,0.741584903203122,0.144599356919912,0,0.647067399789637,0.883366073841574,0.484875253135222,0,3.51336956413857,4.1889341362691,0.766371165625774,0.599075622529601,0,1.27070227073065,1.9472783122627,1.37250180845588,0.502617408451458,3.12883776346098,2.81287003063364,1.66230435647648,1.62241263067758,0.203678727700633,0.995255764880744,0,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.340182495756639,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0.556094498451196,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0,0,0.540186184383045,0,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0.162137619091711,0.877199924551994,0.439100230582101,0.134206418760372,1.47202963994889,0.720332286654991,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.597423819763102,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.786235980452812,0.674586337154561,0.405720242777006,0,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0.744281895337007,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.637819074629948,0.327726629431476,0.690739927463582,0.578596234326046,9.04747703635634,3.80733978673097,0,0,1.60550589987792,2.46144541843627,0,1.26235463602186,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.584511715822624,0,0.642642632843614,0.141940085208269,0,0,0.329940245945071,0,0,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0.658196082408484,0.913394847343798,9.62154003061212,5.2958017715955,0.882113592219848,0.49465875882444,0.645857706783622,0.301564624640779,0.358117032009409,0.984845398470368,0,3.33765543618917,3.07567585436135,0,1.11116716421827,2.44878994106098,2.46049609897845,4.57556346413045,0,0.279902904647316,0.552799895217695,0,0,0,0.648032044930808,0,0.218362563746178,0.674321731924103,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0,0.308132871494482,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.738447635872886,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0.233753804363138,0,1.55390167361845,2.9605572681127,8.562115434568,0.772758376128762,1.12609485270709,0.73260649706906,0.214368379079066,0,1.6942555278512,1.38097570952153,2.29158205375759,2.92150409984269,0.685082519770642,4.5323633843382,2.70009000092722,4.5032120322422,4.53142408984205,4.14208249401456,0,0,0,0.486213434136588,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.192075457214608,0.402048282689293,0,0.347652977834566,0,0.824171801606613,0.883193520806384,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.470546902076653,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0.788035859004508,0,0.309873682371932,0.192906610981141,1.49886346762768,0,1.07435527024149,1.3390183244819,0.661774257358546,0.695603506861264
|short_description=p6@Trpv2
}}

Revision as of 20:19, 12 September 2013

Short description:p6@Trpv2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Trpv2_5end
Coexpression cluster:NA
Association with transcript: 7bp_to_uc007jjj.1, uc011xwb.1_5end
EntrezGene:Trpv2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Trpv2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G35.30
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.56
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.78e-1154
neural tube6.72e-1152
neural rod6.72e-1152
future spinal cord6.72e-1152
neural keel6.72e-1152
occipital lobe6.87e-1010
visual cortex6.87e-1010
neocortex6.87e-1010
posterior neural tube5.05e-0912
chordal neural plate5.05e-0912
nervous system1.31e-0875
central nervous system2.53e-0873
regional part of brain6.51e-0846
gray matter9.71e-0834
brain1.27e-0747
future brain1.27e-0747
neurectoderm1.70e-0764
neural plate1.70e-0764
presumptive neural plate1.70e-0764
bone marrow4.36e-0716







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:62389483..62389494,%2B&oldid=2892446"