FFCP PHASE1:Hg19::chr3:195771058..195771063,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:195771058..195771063,-|id=chr3:195771058..195771063,-|ontology_enrichment_celltype=CL:0000542!1.61e-07!53;CL:0000051!1.61e-07!53;CL:0000838!4.15e-07!52|ontology_enrichment_celltype_v019=CL:0002127;4.78e-12;1!CL:0000911;4.78e-12;1!CL:0000814;4.78e-12;1!CL:0000084;2.60e-10;25|ontology_enrichment_celltype_v019_2=CL:0002127,5.62e-12,1;CL:0000914,5.62e-12,1;CL:0000911,5.62e-12,1;CL:0000814,5.62e-12,1;CL:0002042,5.62e-12,1;CL:0002039,5.62e-12,1;CL:0002040,5.62e-12,1;CL:0002041,5.62e-12,1;CL:0000084,2.62e-10,25;CL:0000827,2.62e-10,25|ontology_enrichment_development_v019=UBERON:0000358;4.78e-12;1!UBERON:0005425;4.78e-12;1|ontology_enrichment_disease=DOID:14566!1.26e-36!239;DOID:162!1.62e-36!235;DOID:0050687!8.35e-24!143;DOID:0050686!4.13e-21!137;DOID:305!4.77e-17!106;DOID:2531!6.50e-15!51;DOID:0060083!6.50e-15!51;DOID:1240!5.15e-10!39;DOID:1749!4.29e-09!14;DOID:0060058!3.33e-07!10;DOID:8692!5.63e-07!31|ontology_enrichment_disease_v019=DOID:178;2.63e-12;1!DOID:326;2.63e-12;1!DOID:3978;2.63e-12;1!DOID:3394;2.63e-12;1!DOID:5844;2.63e-12;1!DOID:8552;3.09e-12;1!DOID:0060060;1.13e-11;1!DOID:3151;1.13e-11;1!DOID:0060061;1.13e-11;1!DOID:3149;1.13e-11;1!DOID:8691;1.13e-11;1!DOID:114;8.93e-07;2!DOID:3307;9.69e-07;2|ontology_enrichment_disease_v019_2=DOID:178,2.63e-12,1;DOID:326,2.63e-12,1;DOID:3978,2.63e-12,1;DOID:3394,2.63e-12,1;DOID:5844,2.63e-12,1;DOID:8552,2.93e-12,1;DOID:3151,8.64e-12,1;DOID:3149,8.64e-12,1;DOID:0060060,1.63e-11,1;DOID:0060061,1.63e-11,1;DOID:8691,1.63e-11,1;DOID:2531,2.00e-09,51;DOID:0060083,2.00e-09,51;DOID:162,9.23e-08,235;DOID:14566,1.50e-07,239;DOID:114,8.93e-07,2;DOID:3307,9.96e-07,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000941;4.78e-12;1!UBERON:0001785;4.78e-12;1!UBERON:0002464;4.78e-12;1!UBERON:0004904;4.78e-12;1!UBERON:0001021;4.78e-12;1|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.06e-12,1;UBERON:0001785,4.06e-12,1;UBERON:0002464,4.06e-12,1;UBERON:0004904,4.06e-12,1;UBERON:0001021,4.06e-12,1;UBERON:0003902,4.06e-12,1;UBERON:0005425,4.06e-12,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.309632246632152,0,0,0,0.387336002901508,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.393419540227666,0.393010762749165,1.23360899399706,0,0,0,0,0,0,0,0.270803863765016,0,0.520237390239513,0,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35378802386407,0.394061520403854,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0.412164046590889,0.183138929636687,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.28853842595289,1.84968792705877,0.159426272728822,0,0.383010740264733,0,0,0.280797178113459,0.912938716132769,0,2.50634477090067,0.50787533340481,0.321176150207399,0.201799707191048,1.27753871307098,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0.557216921387392,0,0,0,0,0,0,0,1.31843099381408,2.95575571379191,0,0.276283915531148,0,0.102268682502155,0.246169610922139,0.311039587661807,0.629078458031288,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0.874599999961957,0,0.341380344856499,0.254253650292766,0,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0.922255617552241,0,0.325942115766024,0,0,0,0,0.470940769185074,3.98908036560375,0,0,0.335643173951685,0.569261198172555,0.317873157960757,0.632994193584081,0,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0,0,0,0.364909578431332,0.586993856796269,0.242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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:195771058..195771063,- | |||
|id=chr3:195771058..195771063,- | |||
|ontology_enrichment_celltype=CL:0000542!1.61e-07!53;CL:0000051!1.61e-07!53;CL:0000838!4.15e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0002127;4.78e-12;1!CL:0000911;4.78e-12;1!CL:0000814;4.78e-12;1!CL:0000084;2.60e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,5.62e-12,1;CL:0000914,5.62e-12,1;CL:0000911,5.62e-12,1;CL:0000814,5.62e-12,1;CL:0002042,5.62e-12,1;CL:0002039,5.62e-12,1;CL:0002040,5.62e-12,1;CL:0002041,5.62e-12,1;CL:0000084,2.62e-10,25;CL:0000827,2.62e-10,25 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.78e-12;1!UBERON:0005425;4.78e-12;1 | |||
|ontology_enrichment_disease=DOID:14566!1.26e-36!239;DOID:162!1.62e-36!235;DOID:0050687!8.35e-24!143;DOID:0050686!4.13e-21!137;DOID:305!4.77e-17!106;DOID:2531!6.50e-15!51;DOID:0060083!6.50e-15!51;DOID:1240!5.15e-10!39;DOID:1749!4.29e-09!14;DOID:0060058!3.33e-07!10;DOID:8692!5.63e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:178;2.63e-12;1!DOID:326;2.63e-12;1!DOID:3978;2.63e-12;1!DOID:3394;2.63e-12;1!DOID:5844;2.63e-12;1!DOID:8552;3.09e-12;1!DOID:0060060;1.13e-11;1!DOID:3151;1.13e-11;1!DOID:0060061;1.13e-11;1!DOID:3149;1.13e-11;1!DOID:8691;1.13e-11;1!DOID:114;8.93e-07;2!DOID:3307;9.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.63e-12,1;DOID:326,2.63e-12,1;DOID:3978,2.63e-12,1;DOID:3394,2.63e-12,1;DOID:5844,2.63e-12,1;DOID:8552,2.93e-12,1;DOID:3151,8.64e-12,1;DOID:3149,8.64e-12,1;DOID:0060060,1.63e-11,1;DOID:0060061,1.63e-11,1;DOID:8691,1.63e-11,1;DOID:2531,2.00e-09,51;DOID:0060083,2.00e-09,51;DOID:162,9.23e-08,235;DOID:14566,1.50e-07,239;DOID:114,8.93e-07,2;DOID:3307,9.96e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.78e-12;1!UBERON:0001785;4.78e-12;1!UBERON:0002464;4.78e-12;1!UBERON:0004904;4.78e-12;1!UBERON:0001021;4.78e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.06e-12,1;UBERON:0001785,4.06e-12,1;UBERON:0002464,4.06e-12,1;UBERON:0004904,4.06e-12,1;UBERON:0001021,4.06e-12,1;UBERON:0003902,4.06e-12,1;UBERON:0005425,4.06e-12,1 | |||
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| |||
|short_description=p@chr3:195771058..195771063,- | |||
}} |
Revision as of 23:31, 12 September 2013
Short description: | p@chr3:195771058..195771063, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:195771058..195771063, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 5.62e-12 | 1 |
immature NK T cell | 5.62e-12 | 1 |
effector T cell | 5.62e-12 | 1 |
mature NK T cell | 5.62e-12 | 1 |
immature NK T cell stage IV | 5.62e-12 | 1 |
immature NK T cell stage I | 5.62e-12 | 1 |
immature NK T cell stage II | 5.62e-12 | 1 |
immature NK T cell stage III | 5.62e-12 | 1 |
T cell | 2.62e-10 | 25 |
pro-T cell | 2.62e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.06e-12 | 1 |
cranial nerve | 4.06e-12 | 1 |
nerve trunk | 4.06e-12 | 1 |
nerve connecting eye with brain | 4.06e-12 | 1 |
nerve | 4.06e-12 | 1 |
retinal neural layer | 4.06e-12 | 1 |
presumptive neural retina | 4.06e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.63e-12 | 1 |
ischemia | 2.63e-12 | 1 |
extrinsic cardiomyopathy | 2.63e-12 | 1 |
myocardial ischemia | 2.63e-12 | 1 |
myocardial infarction | 2.63e-12 | 1 |
chronic myeloid leukemia | 2.93e-12 | 1 |
skin squamous cell carcinoma | 8.64e-12 | 1 |
keratoacanthoma | 8.64e-12 | 1 |
non-Hodgkin lymphoma | 1.63e-11 | 1 |
cutaneous T cell lymphoma | 1.63e-11 | 1 |
mycosis fungoides | 1.63e-11 | 1 |
hematologic cancer | 2.00e-09 | 51 |
immune system cancer | 2.00e-09 | 51 |
cancer | 9.23e-08 | 235 |
disease of cellular proliferation | 1.50e-07 | 239 |
heart disease | 8.93e-07 | 2 |
teratoma | 9.96e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.