FFCP PHASE1:Hg19::chr4:86396321..86396392,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83478|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25361|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000503995_5end|description=CAGE_peak_2_at_ARHGAP24_5end|id=chr4:86396321..86396392,+|ontology_enrichment_celltype=CL:0000057!2.55e-12!75;CL:0002057!3.13e-11!42;CL:0000055!3.31e-10!180;CL:0000860!2.38e-09!45;CL:0002620!2.99e-08!23;CL:0000766!6.32e-08!76;CL:0002194!2.03e-07!63;CL:0000576!2.03e-07!63;CL:0000040!2.03e-07!63;CL:0000559!2.03e-07!63;CL:0002009!5.25e-07!65;CL:0000048!6.12e-07!430;CL:0000136!6.38e-07!15|ontology_enrichment_celltype_v019=CL:0000860;4.46e-09;33!CL:0002057;4.46e-09;33!CL:0002620;9.29e-09;23!CL:0000576;2.32e-08;48!CL:0000473;1.37e-07;39!CL:0000234;1.37e-07;39!CL:0000136;9.49e-07;13|ontology_enrichment_celltype_v019_2=CL:0000057,5.94e-13,76;CL:0000860,3.12e-12,42;CL:0002057,3.12e-12,42;CL:0000473,1.34e-11,48;CL:0000234,1.34e-11,48;CL:0000766,6.31e-10,72;CL:0000048,1.40e-09,427;CL:0002194,1.81e-09,59;CL:0000576,1.81e-09,59;CL:0000040,1.81e-09,59;CL:0000559,1.81e-09,59;CL:0002009,4.57e-09,61;CL:0002620,6.05e-09,23;CL:0000723,8.33e-09,433;CL:0000034,1.06e-07,441;CL:0000136,1.77e-07,15;CL:0002320,1.79e-07,361;CL:0000134,3.37e-07,354;CL:0000557,4.62e-07,67;CL:0000839,9.92e-07,66|ontology_enrichment_development_v019=CL:0002057;5.83e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!2.26e-09!167;UBERON:0003102!9.28e-09!95;UBERON:0000468!1.13e-08!659;UBERON:0004290!1.76e-07!70;UBERON:0000914!4.02e-07!83;UBERON:0002329!4.02e-07!83;UBERON:0003077!4.02e-07!83;UBERON:0003059!4.02e-07!83;UBERON:0007282!4.02e-07!83;UBERON:0009618!4.02e-07!83;UBERON:0007285!4.02e-07!83;UBERON:0000467!5.11e-07!625;UBERON:0000480!8.12e-07!626|ontology_enrichment_uberon_v019=UBERON:0002385;2.30e-08;31!UBERON:0001015;2.30e-08;31!UBERON:0000383;2.30e-08;31!UBERON:0001134;6.77e-08;16!UBERON:0002036;6.77e-08;16!UBERON:0007100;6.96e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.77e-11,315;UBERON:0004120,2.77e-11,315;UBERON:0006603,2.77e-11,315;UBERON:0002204,2.25e-10,167;UBERON:0002390,6.02e-08,98;UBERON:0003061,6.02e-08,98;UBERON:0002329,7.75e-08,71;UBERON:0003059,7.75e-08,71;UBERON:0007282,7.75e-08,71;UBERON:0004290,7.75e-08,71;UBERON:0009618,7.75e-08,71;UBERON:0002384,1.38e-07,371;UBERON:0003077,1.74e-07,72;UBERON:0007285,1.74e-07,72;UBERON:0007524,2.15e-07,73;UBERON:0003102,2.62e-07,99;UBERON:0000479,2.87e-07,773;UBERON:0002193,4.10e-07,108|phase1_expression=7.81217030863394,8.13581990785736,5.63817616383885,4.00293193412522,9.38618298297304,2.61701557230111,2.53299878168311,4.42203911398782,3.3954131665979,0.982935746006035,0,0.218441372130172,0,5.321953177282,3.97676850873499,1.34465029290355,1.80808358407193,5.11217063271161,2.92759679274304,1.35433163884467,0.816002764977012,0.626909442956176,0.286235987131057,0.547497700291537,0,0.229240217243854,0.328402357799783,0.314843125254717,7.86728553697808,4.98978217526377,5.72819656269481,1.83884244895785,0.30120591877825,0.369754010166788,0.46480320348181,0.142169232487422,0,11.6339035791694,11.6315779532682,10.8505435357926,6.71746422719773,4.21061765824673,4.12120908214698,6.25212426752128,4.1566353805769,3.15359279544161,4.18372266430232,3.28934310417461,4.64559556342655,6.32923263108731,3.84241059793651,2.60130452877444,5.5159308917859,8.39130088658974,5.41705946377367,3.9530891303947,1.36453075028923,2.24723484445085,7.65209730927256,4.17207735198922,1.27867425159808,2.96866170168044,6.18337338627059,4.68847225585964,4.64334781805734,5.10646702222026,1.86846674698672,7.03496262718881,4.69334626578181,2.82345498116652,6.05399502633369,4.05105399586321,2.21523671208619,4.85887158517466,2.97646019951061,5.66078342872615,23.7013411719105,25.2297179973731,28.6091544320803,2.28010194992999,2.58591680358817,2.92262646023414,0,0.546138611262131,0,0.853460445133014,0.800791974072025,0,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,1.12101712596307,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0.383959833463255,1.24930726552346,0.710331756132051,0,0,0,0,2.43806866313962,4.02420515822182,3.70801429346238,0,2.50668955317945,2.31754430337318,1.5905718941022,2.91980922181582,0.567208902984407,0.665188192387692,0.351339142772504,1.17881167947941,0.364295288292542,0.741568885568859,0.324547393654683,0,0,1.66943437013739,0.571994910780128,0.371457501329565,0,0.860234595106124,0,0.56530794192401,0,0,0.626984899610432,0.516833518338658,0.71153252537342,3.01248551488203,0,0,0,0.735326160691737,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,2.63560834872127,3.87780264148325,2.61656431285521,1.98788780678127,0.25326102332916,6.88527740228738,9.46560848471085,1.06400514659507,2.24271040056923,1.06748995729705,1.97334038733728,14.0044965929895,6.33140158727534,5.88462851208451,1.96764655938411,1.72852777344,3.04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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83478 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000503995_5end | |||
|description=CAGE_peak_2_at_ARHGAP24_5end | |||
|id=chr4:86396321..86396392,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.55e-12!75;CL:0002057!3.13e-11!42;CL:0000055!3.31e-10!180;CL:0000860!2.38e-09!45;CL:0002620!2.99e-08!23;CL:0000766!6.32e-08!76;CL:0002194!2.03e-07!63;CL:0000576!2.03e-07!63;CL:0000040!2.03e-07!63;CL:0000559!2.03e-07!63;CL:0002009!5.25e-07!65;CL:0000048!6.12e-07!430;CL:0000136!6.38e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.46e-09;33!CL:0002057;4.46e-09;33!CL:0002620;9.29e-09;23!CL:0000576;2.32e-08;48!CL:0000473;1.37e-07;39!CL:0000234;1.37e-07;39!CL:0000136;9.49e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.94e-13,76;CL:0000860,3.12e-12,42;CL:0002057,3.12e-12,42;CL:0000473,1.34e-11,48;CL:0000234,1.34e-11,48;CL:0000766,6.31e-10,72;CL:0000048,1.40e-09,427;CL:0002194,1.81e-09,59;CL:0000576,1.81e-09,59;CL:0000040,1.81e-09,59;CL:0000559,1.81e-09,59;CL:0002009,4.57e-09,61;CL:0002620,6.05e-09,23;CL:0000723,8.33e-09,433;CL:0000034,1.06e-07,441;CL:0000136,1.77e-07,15;CL:0002320,1.79e-07,361;CL:0000134,3.37e-07,354;CL:0000557,4.62e-07,67;CL:0000839,9.92e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;5.83e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.26e-09!167;UBERON:0003102!9.28e-09!95;UBERON:0000468!1.13e-08!659;UBERON:0004290!1.76e-07!70;UBERON:0000914!4.02e-07!83;UBERON:0002329!4.02e-07!83;UBERON:0003077!4.02e-07!83;UBERON:0003059!4.02e-07!83;UBERON:0007282!4.02e-07!83;UBERON:0009618!4.02e-07!83;UBERON:0007285!4.02e-07!83;UBERON:0000467!5.11e-07!625;UBERON:0000480!8.12e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.30e-08;31!UBERON:0001015;2.30e-08;31!UBERON:0000383;2.30e-08;31!UBERON:0001134;6.77e-08;16!UBERON:0002036;6.77e-08;16!UBERON:0007100;6.96e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.77e-11,315;UBERON:0004120,2.77e-11,315;UBERON:0006603,2.77e-11,315;UBERON:0002204,2.25e-10,167;UBERON:0002390,6.02e-08,98;UBERON:0003061,6.02e-08,98;UBERON:0002329,7.75e-08,71;UBERON:0003059,7.75e-08,71;UBERON:0007282,7.75e-08,71;UBERON:0004290,7.75e-08,71;UBERON:0009618,7.75e-08,71;UBERON:0002384,1.38e-07,371;UBERON:0003077,1.74e-07,72;UBERON:0007285,1.74e-07,72;UBERON:0007524,2.15e-07,73;UBERON:0003102,2.62e-07,99;UBERON:0000479,2.87e-07,773;UBERON:0002193,4.10e-07,108 | |||
|phase1_expression=7.81217030863394,8.13581990785736,5.63817616383885,4.00293193412522,9.38618298297304,2.61701557230111,2.53299878168311,4.42203911398782,3.3954131665979,0.982935746006035,0,0.218441372130172,0,5.321953177282,3.97676850873499,1.34465029290355,1.80808358407193,5.11217063271161,2.92759679274304,1.35433163884467,0.816002764977012,0.626909442956176,0.286235987131057,0.547497700291537,0,0.229240217243854,0.328402357799783,0.314843125254717,7.86728553697808,4.98978217526377,5.72819656269481,1.83884244895785,0.30120591877825,0.369754010166788,0.46480320348181,0.142169232487422,0,11.6339035791694,11.6315779532682,10.8505435357926,6.71746422719773,4.21061765824673,4.12120908214698,6.25212426752128,4.1566353805769,3.15359279544161,4.18372266430232,3.28934310417461,4.64559556342655,6.32923263108731,3.84241059793651,2.60130452877444,5.5159308917859,8.39130088658974,5.41705946377367,3.9530891303947,1.36453075028923,2.24723484445085,7.65209730927256,4.17207735198922,1.27867425159808,2.96866170168044,6.18337338627059,4.68847225585964,4.64334781805734,5.10646702222026,1.86846674698672,7.03496262718881,4.69334626578181,2.82345498116652,6.05399502633369,4.05105399586321,2.21523671208619,4.85887158517466,2.97646019951061,5.66078342872615,23.7013411719105,25.2297179973731,28.6091544320803,2.28010194992999,2.58591680358817,2.92262646023414,0,0.546138611262131,0,0.853460445133014,0.800791974072025,0,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,1.12101712596307,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0.383959833463255,1.24930726552346,0.710331756132051,0,0,0,0,2.43806866313962,4.02420515822182,3.70801429346238,0,2.50668955317945,2.31754430337318,1.5905718941022,2.91980922181582,0.567208902984407,0.665188192387692,0.351339142772504,1.17881167947941,0.364295288292542,0.741568885568859,0.324547393654683,0,0,1.66943437013739,0.571994910780128,0.371457501329565,0,0.860234595106124,0,0.56530794192401,0,0,0.626984899610432,0.516833518338658,0.71153252537342,3.01248551488203,0,0,0,0.735326160691737,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,2.63560834872127,3.87780264148325,2.61656431285521,1.98788780678127,0.25326102332916,6.88527740228738,9.46560848471085,1.06400514659507,2.24271040056923,1.06748995729705,1.97334038733728,14.0044965929895,6.33140158727534,5.88462851208451,1.96764655938411,1.72852777344,3.04617861383936,5.93104145977609,2.85235910772225,5.52960118041664,4.81481444439436,11.1692331614011,8.14614678873041,9.39109187772509,3.56219520204127,19.9418757669227,4.75201142912821,3.4617370098998,2.73048408581408,2.87447256726495,4.20840284885166,2.87772595705518,11.3596287348515,0.877955241761676,2.14541457059314,1.80285670687916,0.907457465280168,6.45802688479903,6.83383644219416,5.93409323246773,6.30191301777245,5.5648365788757,9.53269998168828,5.21127197728451,6.58227695740938,3.99491721160914,9.08761587278812,5.70709371582256,8.72888706821584,4.61512470271599,2.11579406278045,1.18692414617341,0,0.272746120590835,0,0,0,0.116193942869518,0.310983165046111,0,0,0,5.14592750554308,6.90674606762403,6.50115099244771,3.60939740834793,0.118306800039844,0.337169380156203,0,0.220587945464788,0,0.474541238222193,0.134831308160164,0.196221465125346,0.769494313892781,0,0,2.8810180793198,5.88034845542168,1.26755034821831,0,1.18157981336281,0,2.45976877086227,0.857839051492628,0.219500570817251,0,0.100528972411631,2.12953423864618,3.58389135841357,4.15973914111831,0,0.579652024875384,0.70445216541493,0,0,0,2.37061319387782,1.71697232418975,6.15542515218493,0.468008530278475,2.0808362720422,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0.414656231081544,0.288239906833923,0.12624243342638,2.92090313743978,1.90994212779139,7.03304683260282,3.4214489204541,5.44985711327615,6.30720421472227,7.71731368102561,0.448524337381443,0.43596006883328,0.1466765716419,3.87815147273333,3.57656445851882,3.381211010224,2.39344304926383,4.16029747645464,0.257207374262142,0,0.266422179016099,4.28933980974443,4.34097284313154,2.46972101034231,1.95441710576241,1.77695974371273,3.95975936466715,1.80863626235752,0.871533458600294,4.09889263846434,1.2162378064119,2.00902836572851,2.10833939483032,0.479249710983165,1.14861935834114,4.27910715122155,6.65994010670864,11.7121503853719,13.6086332062321,0,0.197030760201927,0,0.385029108839245,0.76228387266739,0,0,0.335032530668698,0,14.9801404789436,5.9832291840805,29.4235014539585,6.50264906111441,0.500170521059677,1.89885516589815,1.66376689224646,4.81758269752337,5.04647728108591,4.09994952474496,4.51419149591578,15.9185252839189,5.17365356462525,0.664225598535437,0.921845842708516,5.47366771148922,0.391602314925481,1.37257369524342,8.06395301879261,9.05999643438191,5.22965033236877,0,0,0.907170879989041,7.44323423456331,15.9600452219585,6.17452207752762,6.02254001501795,7.67560873600055,5.46903331888265,4.45254199334973,2.00472601943452,2.13074070375753,3.69572202062141,4.15403543346897,1.7431556768993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| |||
|short_description=p2@ARHGAP24 | |||
}} |
Revision as of 12:07, 13 September 2013
Short description: | p2@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ARHGAP24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503995_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.94e-13 | 76 |
classical monocyte | 3.12e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.12e-12 | 42 |
defensive cell | 1.34e-11 | 48 |
phagocyte | 1.34e-11 | 48 |
myeloid leukocyte | 6.31e-10 | 72 |
multi fate stem cell | 1.40e-09 | 427 |
monopoietic cell | 1.81e-09 | 59 |
monocyte | 1.81e-09 | 59 |
monoblast | 1.81e-09 | 59 |
promonocyte | 1.81e-09 | 59 |
macrophage dendritic cell progenitor | 4.57e-09 | 61 |
skin fibroblast | 6.05e-09 | 23 |
somatic stem cell | 8.33e-09 | 433 |
stem cell | 1.06e-07 | 441 |
fat cell | 1.77e-07 | 15 |
connective tissue cell | 1.79e-07 | 361 |
mesenchymal cell | 3.37e-07 | 354 |
granulocyte monocyte progenitor cell | 4.62e-07 | 67 |
myeloid lineage restricted progenitor cell | 9.92e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.77e-11 | 315 |
mesoderm-derived structure | 2.77e-11 | 315 |
presumptive mesoderm | 2.77e-11 | 315 |
musculoskeletal system | 2.25e-10 | 167 |
hematopoietic system | 6.02e-08 | 98 |
blood island | 6.02e-08 | 98 |
somite | 7.75e-08 | 71 |
presomitic mesoderm | 7.75e-08 | 71 |
presumptive segmental plate | 7.75e-08 | 71 |
dermomyotome | 7.75e-08 | 71 |
trunk paraxial mesoderm | 7.75e-08 | 71 |
connective tissue | 1.38e-07 | 371 |
paraxial mesoderm | 1.74e-07 | 72 |
presumptive paraxial mesoderm | 1.74e-07 | 72 |
dense mesenchyme tissue | 2.15e-07 | 73 |
surface structure | 2.62e-07 | 99 |
tissue | 2.87e-07 | 773 |
hemolymphoid system | 4.10e-07 | 108 |
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