FFCP PHASE1:Hg19::chr5:136900138..136900150,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:136900138..136900150,-|id=chr5:136900138..136900150,-|ontology_enrichment_celltype=CL:0000860!3.67e-56!45;CL:0002057!1.18e-51!42;CL:0002194!2.43e-51!63;CL:0000576!2.43e-51!63;CL:0000040!2.43e-51!63;CL:0000559!2.43e-51!63;CL:0002009!2.54e-49!65;CL:0000766!6.24e-49!76;CL:0000763!5.70e-45!112;CL:0000049!5.70e-45!112;CL:0000839!8.88e-45!70;CL:0000557!6.03e-44!71;CL:0000988!7.47e-39!182;CL:0000037!5.71e-38!172;CL:0000566!5.71e-38!172;CL:0002087!8.83e-36!119;CL:0002032!8.52e-35!165;CL:0000837!8.52e-35!165;CL:0000738!1.93e-33!140;CL:0002031!2.93e-29!124;CL:0002393!1.98e-13!9;CL:0002397!1.98e-13!9;CL:0000134!9.57e-12!358;CL:0002320!3.85e-11!365;CL:0000219!4.45e-11!390;CL:0000080!7.78e-11!6;CL:0000048!4.73e-07!430;CL:0000875!9.26e-07!3;CL:0002396!9.26e-07!3|ontology_enrichment_celltype_v019=CL:0000576;1.54e-21;48!CL:0000860;5.25e-21;33!CL:0002057;5.25e-21;33!CL:0000473;1.46e-17;39!CL:0000234;1.46e-17;39!CL:0002393;1.18e-11;6!CL:0002397;1.18e-11;6!CL:0000766;1.01e-10;69!CL:0000226;1.19e-10;3!CL:0000842;1.19e-10;3!CL:0000763;2.81e-09;100!CL:0002127;5.70e-09;1!CL:0000911;5.70e-09;1!CL:0000814;5.70e-09;1!CL:0002087;8.35e-09;104!CL:0000988;9.99e-07;177|ontology_enrichment_celltype_v019_2=CL:0000860,6.11e-37,42;CL:0002057,6.11e-37,42;CL:0000473,5.59e-32,48;CL:0000234,5.59e-32,48;CL:0002194,1.41e-28,59;CL:0000576,1.41e-28,59;CL:0000040,1.41e-28,59;CL:0000559,1.41e-28,59;CL:0002009,1.47e-27,61;CL:0000839,2.78e-25,66;CL:0000557,7.25e-25,67;CL:0002087,2.17e-24,115;CL:0000988,4.24e-24,177;CL:0000763,1.32e-23,108;CL:0000049,1.32e-23,108;CL:0000037,2.24e-23,168;CL:0000766,5.86e-23,72;CL:0002032,2.31e-20,161;CL:0000837,2.31e-20,161;CL:0000738,4.54e-20,136;CL:0002031,1.13e-18,120;CL:0002393,1.94e-13,9;CL:0002397,1.94e-13,9;CL:0000226,1.69e-10,3;CL:0000842,1.69e-10,3;CL:0002127,4.89e-09,1;CL:0000914,4.89e-09,1;CL:0000911,4.89e-09,1;CL:0000814,4.89e-09,1;CL:0002042,4.89e-09,1;CL:0002039,4.89e-09,1;CL:0002040,4.89e-09,1;CL:0002041,4.89e-09,1;CL:0000134,7.02e-09,354;CL:0002320,1.27e-08,361;CL:0000219,1.03e-07,386|ontology_enrichment_development_v019=CL:0002057;1.69e-28;42!CL:0000049;8.13e-09;108|ontology_enrichment_disease=DOID:1240!1.28e-08!39;DOID:8692!3.00e-07!31;DOID:2531!3.25e-07!51;DOID:0060083!3.25e-07!51|ontology_enrichment_disease_v019=DOID:1240;2.17e-07;39|ontology_enrichment_disease_v019_2=DOID:1240,3.14e-11,39;DOID:2531,2.51e-08,51;DOID:0060083,2.51e-08,51|ontology_enrichment_uberon=UBERON:0002390!8.10e-43!102;UBERON:0003061!8.10e-43!102;UBERON:0002371!2.78e-39!80;UBERON:0002193!4.06e-39!112;UBERON:0001474!1.58e-35!86;UBERON:0002405!2.79e-28!115;UBERON:0004765!4.08e-28!101;UBERON:0001434!4.08e-28!101;UBERON:0003081!2.30e-12!216;UBERON:0002204!1.07e-11!167;UBERON:0002384!8.00e-11!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.15e-26,98;UBERON:0003061,3.15e-26,98;UBERON:0002193,1.73e-23,108;UBERON:0002371,1.31e-21,76;UBERON:0001474,7.84e-20,82;UBERON:0002405,1.28e-19,93;UBERON:0004765,7.98e-18,90;UBERON:0001434,9.22e-16,100;UBERON:0003081,7.96e-11,203;UBERON:0002204,2.81e-08,167;UBERON:0002384,2.85e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.77408061658038,0,0,0,0.0774672005803016,0,0.293600439334847,2.76997704265939,1.80490002723128,0.651032612147555,0,0,0,0.581592955118259,0.755751887377619,0.242584061187816,0.697287110717054,0.411167888021826,0.929119112685311,0,1.0246428261164,0.236482229888585,0.689491361473237,3.87290810150296,0,0.564727018627814,0.272906150057846,0.449446968890169,0.918251677112708,1.92557416245656,0.639337125799041,1.31940520074686,1.19678194572979,0,1.7412554317715,0.56738522469114,0,0.75374599577023,1.0429658368404,0.65156653411535,0,3.31449872388808,0.949387162322653,0,0.637812899895131,1.67726916406701,3.81917345898083,2.4028302854641,4.8217676009124,0.855038231223746,0.79566670879636,1.27864907635244,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91421374383171,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.07857100409308,0.106727557803444,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:136900138..136900150,- | |||
|id=chr5:136900138..136900150,- | |||
|ontology_enrichment_celltype=CL:0000860!3.67e-56!45;CL:0002057!1.18e-51!42;CL:0002194!2.43e-51!63;CL:0000576!2.43e-51!63;CL:0000040!2.43e-51!63;CL:0000559!2.43e-51!63;CL:0002009!2.54e-49!65;CL:0000766!6.24e-49!76;CL:0000763!5.70e-45!112;CL:0000049!5.70e-45!112;CL:0000839!8.88e-45!70;CL:0000557!6.03e-44!71;CL:0000988!7.47e-39!182;CL:0000037!5.71e-38!172;CL:0000566!5.71e-38!172;CL:0002087!8.83e-36!119;CL:0002032!8.52e-35!165;CL:0000837!8.52e-35!165;CL:0000738!1.93e-33!140;CL:0002031!2.93e-29!124;CL:0002393!1.98e-13!9;CL:0002397!1.98e-13!9;CL:0000134!9.57e-12!358;CL:0002320!3.85e-11!365;CL:0000219!4.45e-11!390;CL:0000080!7.78e-11!6;CL:0000048!4.73e-07!430;CL:0000875!9.26e-07!3;CL:0002396!9.26e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.54e-21;48!CL:0000860;5.25e-21;33!CL:0002057;5.25e-21;33!CL:0000473;1.46e-17;39!CL:0000234;1.46e-17;39!CL:0002393;1.18e-11;6!CL:0002397;1.18e-11;6!CL:0000766;1.01e-10;69!CL:0000226;1.19e-10;3!CL:0000842;1.19e-10;3!CL:0000763;2.81e-09;100!CL:0002127;5.70e-09;1!CL:0000911;5.70e-09;1!CL:0000814;5.70e-09;1!CL:0002087;8.35e-09;104!CL:0000988;9.99e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.11e-37,42;CL:0002057,6.11e-37,42;CL:0000473,5.59e-32,48;CL:0000234,5.59e-32,48;CL:0002194,1.41e-28,59;CL:0000576,1.41e-28,59;CL:0000040,1.41e-28,59;CL:0000559,1.41e-28,59;CL:0002009,1.47e-27,61;CL:0000839,2.78e-25,66;CL:0000557,7.25e-25,67;CL:0002087,2.17e-24,115;CL:0000988,4.24e-24,177;CL:0000763,1.32e-23,108;CL:0000049,1.32e-23,108;CL:0000037,2.24e-23,168;CL:0000766,5.86e-23,72;CL:0002032,2.31e-20,161;CL:0000837,2.31e-20,161;CL:0000738,4.54e-20,136;CL:0002031,1.13e-18,120;CL:0002393,1.94e-13,9;CL:0002397,1.94e-13,9;CL:0000226,1.69e-10,3;CL:0000842,1.69e-10,3;CL:0002127,4.89e-09,1;CL:0000914,4.89e-09,1;CL:0000911,4.89e-09,1;CL:0000814,4.89e-09,1;CL:0002042,4.89e-09,1;CL:0002039,4.89e-09,1;CL:0002040,4.89e-09,1;CL:0002041,4.89e-09,1;CL:0000134,7.02e-09,354;CL:0002320,1.27e-08,361;CL:0000219,1.03e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-28;42!CL:0000049;8.13e-09;108 | |||
|ontology_enrichment_disease=DOID:1240!1.28e-08!39;DOID:8692!3.00e-07!31;DOID:2531!3.25e-07!51;DOID:0060083!3.25e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.17e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.14e-11,39;DOID:2531,2.51e-08,51;DOID:0060083,2.51e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.10e-43!102;UBERON:0003061!8.10e-43!102;UBERON:0002371!2.78e-39!80;UBERON:0002193!4.06e-39!112;UBERON:0001474!1.58e-35!86;UBERON:0002405!2.79e-28!115;UBERON:0004765!4.08e-28!101;UBERON:0001434!4.08e-28!101;UBERON:0003081!2.30e-12!216;UBERON:0002204!1.07e-11!167;UBERON:0002384!8.00e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.15e-26,98;UBERON:0003061,3.15e-26,98;UBERON:0002193,1.73e-23,108;UBERON:0002371,1.31e-21,76;UBERON:0001474,7.84e-20,82;UBERON:0002405,1.28e-19,93;UBERON:0004765,7.98e-18,90;UBERON:0001434,9.22e-16,100;UBERON:0003081,7.96e-11,203;UBERON:0002204,2.81e-08,167;UBERON:0002384,2.85e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.77408061658038,0,0,0,0.0774672005803016,0,0.293600439334847,2.76997704265939,1.80490002723128,0.651032612147555,0,0,0,0.581592955118259,0.755751887377619,0.242584061187816,0.697287110717054,0.411167888021826,0.929119112685311,0,1.0246428261164,0.236482229888585,0.689491361473237,3.87290810150296,0,0.564727018627814,0.272906150057846,0.449446968890169,0.918251677112708,1.92557416245656,0.639337125799041,1.31940520074686,1.19678194572979,0,1.7412554317715,0.56738522469114,0,0.75374599577023,1.0429658368404,0.65156653411535,0,3.31449872388808,0.949387162322653,0,0.637812899895131,1.67726916406701,3.81917345898083,2.4028302854641,4.8217676009124,0.855038231223746,0.79566670879636,1.27864907635244,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91421374383171,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.07857100409308,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,2.50634477090067,0,0.642352300414798,0.201799707191048,2.98092366383228,1.37402137902306,0.921722292925374,1.11838053946208,0.166849141711909,0.781552381608161,0,0,0,0,0,0,0,0,6.24082951953879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04628948090749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37216902944498,0.247127877893006,0.417687798021821,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.65780385377567,0.492692742319255,0,0,0,0.274083849293502,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0.179287339332845,0,0,0,0,0,0,0,0,0.328370082997356,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.314531883711793,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.603851374266694,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:136900138..136900150,- | |||
}} |
Revision as of 13:21, 13 September 2013
Short description: | p@chr5:136900138..136900150, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:136900138..136900150, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.15e-26 | 98 |
blood island | 3.15e-26 | 98 |
hemolymphoid system | 1.73e-23 | 108 |
bone marrow | 1.31e-21 | 76 |
bone element | 7.84e-20 | 82 |
immune system | 1.28e-19 | 93 |
skeletal element | 7.98e-18 | 90 |
skeletal system | 9.22e-16 | 100 |
lateral plate mesoderm | 7.96e-11 | 203 |
musculoskeletal system | 2.81e-08 | 167 |
connective tissue | 2.85e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.14e-11 | 39 |
hematologic cancer | 2.51e-08 | 51 |
immune system cancer | 2.51e-08 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.