FFCP PHASE1:Mm9::chr18:24364108..24364133,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14423|HGNC=|MCL_coexpression_id=123|UniProt=O08912|association_with_transcript=-134bp_to_ENSMUST00000170243_5end|description=CAGE_peak_11_at_Galnt1_5end|id=chr18:24364108..24364133,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,8.70e-15,32;CL:0002032,8.70e-15,32;CL:0000037,8.70e-15,32;CL:0000837,8.70e-15,32;CL:0000049,1.79e-09,19;CL:0002320,4.65e-09,46;CL:0000134,4.65e-09,46;CL:0000219,3.79e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.48e-09!29;UBERON:0002193!8.76e-09!48;UBERON:0002390!1.69e-07!45;UBERON:0003061!1.69e-07!45;UBERON:0000065!2.84e-07!41;UBERON:0002370!3.61e-07!23;UBERON:0000974!3.61e-07!23;UBERON:0004807!3.61e-07!23;UBERON:0005058!3.61e-07!23;UBERON:0003351!3.61e-07!23;UBERON:0009113!3.61e-07!23;UBERON:0003295!3.61e-07!23;UBERON:0009722!3.61e-07!23;UBERON:0005562!3.61e-07!23;UBERON:0007690!3.61e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.65e-20,48;UBERON:0002405,1.65e-20,48;UBERON:0002390,4.95e-20,45;UBERON:0003061,4.95e-20,45;UBERON:0002370,1.14e-15,23;UBERON:0000974,1.14e-15,23;UBERON:0004807,1.14e-15,23;UBERON:0005058,1.14e-15,23;UBERON:0003351,1.14e-15,23;UBERON:0009113,1.14e-15,23;UBERON:0003295,1.14e-15,23;UBERON:0009722,1.14e-15,23;UBERON:0005562,1.14e-15,23;UBERON:0007690,1.14e-15,23;UBERON:0004177,2.73e-15,29;UBERON:0005057,2.73e-15,29;UBERON:0006562,7.14e-15,24;UBERON:0003408,7.14e-15,24;UBERON:0001557,7.14e-15,24;UBERON:0001042,7.14e-15,24;UBERON:0008814,7.14e-15,24;UBERON:0009145,7.14e-15,24;UBERON:0000072,1.15e-14,27;UBERON:0000077,5.38e-12,35;UBERON:0000065,1.19e-09,41;UBERON:0003081,2.04e-09,87;UBERON:0001004,2.48e-09,42;UBERON:0002384,4.65e-09,46;UBERON:0007811,8.46e-09,36;UBERON:0000153,7.53e-07,43|phase1_expression=0.160148847104794,0,0.454999239389536,0.30246421130683,0,0.33575854382378,0.700837921786577,1.42035655785734,0.140788722151667,0.70219357896598,0.513653904676515,0.558405112967355,1.19840510951844,1.22388563386596,1.66554880907831,0.809901069559304,0,2.20823515750766,2.74228867211478,2.12194825899015,0.425216450755349,0.893618560807968,0.261199789138935,0.95995453676044,0.91763712426868,0,0.86152399231815,0.646413698057667,0.380046838912748,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0,0.612508068787107,1.25559489221072,0,2.61761871986899,1.76469446409304,1.36609096991689,2.42755176515577,0.125896817975577,0,0.183546752161682,0,0,0,0.194429899074283,0.279972843250725,0,2.18117387875057,1.45072428402269,1.68046899571232,0,0.286533439938757,0,0.404632921719196,0,0.633831403506179,0,0.889294796111139,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0.571301968807607,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0,0,0.454357159999104,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.79928715803342,3.10725460376606,0.29688427812965,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0,1.76922110389975,0.323533699894818,0.883366073841574,0.969750506270444,0,0,0.209446706813455,0,1.91704199209472,1.19980546198682,2.1601938602421,0.299581278809645,0,0,0.521472960576829,0,0,0.162241263067758,0.101839363850316,0.746441823660558,0.758168275301024,0,0.390361328888111,0.459804208866946,0,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0.398068533636986,4.21327912387941,1.28673953557358,1.70498099637356,0.207125772535502,0.234526059981096,0.720248245844059,0.23674473558521,0.393528463494808,0.771335564436891,0.232533944750408,0.804820204198858,0.467061369468678,0.493679549740441,0.32833492815819,0.324275238183423,0.292399974850665,0.439100230582101,0.671032093801859,0,0.102904612379284,0.660837565967596,0.264450566663544,1.06644125267617,0.232236671860439,0.128867461322093,0.80673409849337,0.667134131534611,0.380451252225118,0.474529061544512,0.329397909448022,0,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0,0.379335801906163,0.456994050438915,0,0.814605311381257,0.193952487167626,0.210407459670956,0.69560190836683,0.590440591918409,0.470996183524124,0.123397163921801,0,0.166845105716094,0.196558995113203,0.899448449539415,0.811440485554012,0.72353147925725,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.923765950833023,0,0.488894929326078,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,0.975668239288994,1.10344600874334,0.221464689648775,0.797273843287435,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0.222798674082394,0.849229592366497,0.404810701674894,0.292255857911312,0,0,0.425820255624806,0,0.48866087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| ||
|EntrezGene=14423 | |||
|HGNC= | |||
|MCL_coexpression_id=123 | |||
|UniProt=O08912 | |||
|association_with_transcript=-134bp_to_ENSMUST00000170243_5end | |||
|description=CAGE_peak_11_at_Galnt1_5end | |||
|id=chr18:24364108..24364133,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.70e-15,32;CL:0002032,8.70e-15,32;CL:0000037,8.70e-15,32;CL:0000837,8.70e-15,32;CL:0000049,1.79e-09,19;CL:0002320,4.65e-09,46;CL:0000134,4.65e-09,46;CL:0000219,3.79e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.48e-09!29;UBERON:0002193!8.76e-09!48;UBERON:0002390!1.69e-07!45;UBERON:0003061!1.69e-07!45;UBERON:0000065!2.84e-07!41;UBERON:0002370!3.61e-07!23;UBERON:0000974!3.61e-07!23;UBERON:0004807!3.61e-07!23;UBERON:0005058!3.61e-07!23;UBERON:0003351!3.61e-07!23;UBERON:0009113!3.61e-07!23;UBERON:0003295!3.61e-07!23;UBERON:0009722!3.61e-07!23;UBERON:0005562!3.61e-07!23;UBERON:0007690!3.61e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.65e-20,48;UBERON:0002405,1.65e-20,48;UBERON:0002390,4.95e-20,45;UBERON:0003061,4.95e-20,45;UBERON:0002370,1.14e-15,23;UBERON:0000974,1.14e-15,23;UBERON:0004807,1.14e-15,23;UBERON:0005058,1.14e-15,23;UBERON:0003351,1.14e-15,23;UBERON:0009113,1.14e-15,23;UBERON:0003295,1.14e-15,23;UBERON:0009722,1.14e-15,23;UBERON:0005562,1.14e-15,23;UBERON:0007690,1.14e-15,23;UBERON:0004177,2.73e-15,29;UBERON:0005057,2.73e-15,29;UBERON:0006562,7.14e-15,24;UBERON:0003408,7.14e-15,24;UBERON:0001557,7.14e-15,24;UBERON:0001042,7.14e-15,24;UBERON:0008814,7.14e-15,24;UBERON:0009145,7.14e-15,24;UBERON:0000072,1.15e-14,27;UBERON:0000077,5.38e-12,35;UBERON:0000065,1.19e-09,41;UBERON:0003081,2.04e-09,87;UBERON:0001004,2.48e-09,42;UBERON:0002384,4.65e-09,46;UBERON:0007811,8.46e-09,36;UBERON:0000153,7.53e-07,43 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0.30246421130683,0,0.33575854382378,0.700837921786577,1.42035655785734,0.140788722151667,0.70219357896598,0.513653904676515,0.558405112967355,1.19840510951844,1.22388563386596,1.66554880907831,0.809901069559304,0,2.20823515750766,2.74228867211478,2.12194825899015,0.425216450755349,0.893618560807968,0.261199789138935,0.95995453676044,0.91763712426868,0,0.86152399231815,0.646413698057667,0.380046838912748,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0,0.612508068787107,1.25559489221072,0,2.61761871986899,1.76469446409304,1.36609096991689,2.42755176515577,0.125896817975577,0,0.183546752161682,0,0,0,0.194429899074283,0.279972843250725,0,2.18117387875057,1.45072428402269,1.68046899571232,0,0.286533439938757,0,0.404632921719196,0,0.633831403506179,0,0.889294796111139,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0.571301968807607,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0,0,0.454357159999104,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.79928715803342,3.10725460376606,0.29688427812965,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0,1.76922110389975,0.323533699894818,0.883366073841574,0.969750506270444,0,0,0.209446706813455,0,1.91704199209472,1.19980546198682,2.1601938602421,0.299581278809645,0,0,0.521472960576829,0,0,0.162241263067758,0.101839363850316,0.746441823660558,0.758168275301024,0,0.390361328888111,0.459804208866946,0,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0.398068533636986,4.21327912387941,1.28673953557358,1.70498099637356,0.207125772535502,0.234526059981096,0.720248245844059,0.23674473558521,0.393528463494808,0.771335564436891,0.232533944750408,0.804820204198858,0.467061369468678,0.493679549740441,0.32833492815819,0.324275238183423,0.292399974850665,0.439100230582101,0.671032093801859,0,0.102904612379284,0.660837565967596,0.264450566663544,1.06644125267617,0.232236671860439,0.128867461322093,0.80673409849337,0.667134131534611,0.380451252225118,0.474529061544512,0.329397909448022,0,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0,0.379335801906163,0.456994050438915,0,0.814605311381257,0.193952487167626,0.210407459670956,0.69560190836683,0.590440591918409,0.470996183524124,0.123397163921801,0,0.166845105716094,0.196558995113203,0.899448449539415,0.811440485554012,0.72353147925725,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.923765950833023,0,0.488894929326078,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,0.975668239288994,1.10344600874334,0.221464689648775,0.797273843287435,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0.222798674082394,0.849229592366497,0.404810701674894,0.292255857911312,0,0,0.425820255624806,0,0.488660878060728,0.329940245945071,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.900305470156551,0.258717367565509,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0.704015124191131,0.21183207086382,0,0.49465875882444,0.161464426695906,0.241251699712623,0.477489376012546,0.492422699235184,0.291480836629851,0.18542530201051,1.19609616558497,0.412773735926445,0.740778109478847,0.753473828018764,1.0935538217682,0.686334519619568,1.69978429993855,1.95932033253121,2.3493995546752,0,0.632671987162271,0.406638934253697,0.324016022465404,0.209088296014469,0,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0.496375471371293,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.629156066554265,0,0,2.21207784439725,0.810900861160657,0.718976700153791,1.03936658382236,2.32734704367726,2.38417625737518,1.9231271923195,1.32920574457119,2.82706059854813,2.057583779685,2.62148081355785,2.72882066071307,3.46362629905186,2.57129184799452,0,0,0.717710852875806,0.167884616364078,0.386379188064381,0.750729901804728,0,0.214368379079066,1.00314420807073,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.31136204275253,0.399024873401031,0.512200817262403,0.486213434136588,0,0.367687016900028,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.256100609619477,0.287177344778066,0,0.115884325944855,0.77163688185482,0,0,0,0.177475806159338,0.476872379894642,0.436039249896986,0.564656282491984,0.423073039458382,0.182927972872773,0.526139422875686,0.950628796921032,0.561142271657738,0.593175090620871,0.591026894253381,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p11@Galnt1 | |||
}} |
Revision as of 15:49, 13 September 2013
Short description: | p11@Galnt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Galnt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | -134bp_to_ENSMUST00000170243_5end |
EntrezGene: | Galnt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.70e-15 | 32 |
hematopoietic oligopotent progenitor cell | 8.70e-15 | 32 |
hematopoietic stem cell | 8.70e-15 | 32 |
hematopoietic multipotent progenitor cell | 8.70e-15 | 32 |
common myeloid progenitor | 1.79e-09 | 19 |
connective tissue cell | 4.65e-09 | 46 |
mesenchymal cell | 4.65e-09 | 46 |
motile cell | 3.79e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.65e-20 | 48 |
immune system | 1.65e-20 | 48 |
hematopoietic system | 4.95e-20 | 45 |
blood island | 4.95e-20 | 45 |
thymus | 1.14e-15 | 23 |
neck | 1.14e-15 | 23 |
respiratory system epithelium | 1.14e-15 | 23 |
hemolymphoid system gland | 1.14e-15 | 23 |
pharyngeal epithelium | 1.14e-15 | 23 |
thymic region | 1.14e-15 | 23 |
pharyngeal gland | 1.14e-15 | 23 |
entire pharyngeal arch endoderm | 1.14e-15 | 23 |
thymus primordium | 1.14e-15 | 23 |
early pharyngeal endoderm | 1.14e-15 | 23 |
hemopoietic organ | 2.73e-15 | 29 |
immune organ | 2.73e-15 | 29 |
pharynx | 7.14e-15 | 24 |
gland of gut | 7.14e-15 | 24 |
upper respiratory tract | 7.14e-15 | 24 |
chordate pharynx | 7.14e-15 | 24 |
pharyngeal arch system | 7.14e-15 | 24 |
pharyngeal region of foregut | 7.14e-15 | 24 |
segment of respiratory tract | 1.15e-14 | 27 |
mixed endoderm/mesoderm-derived structure | 5.38e-12 | 35 |
respiratory tract | 1.19e-09 | 41 |
lateral plate mesoderm | 2.04e-09 | 87 |
respiratory system | 2.48e-09 | 42 |
connective tissue | 4.65e-09 | 46 |
craniocervical region | 8.46e-09 | 36 |
anterior region of body | 7.53e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.