FFCP PHASE1:Hg19::chr5:56469958..56469966,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=65056|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29520|TSSclassifier=S|UniProt=|association_with_transcript=14bp_to_ENST00000506184_5end|coexpression_cluster_id=C176|description=CAGE_peak_8_at_GPBP1_5end|id=chr5:56469958..56469966,+|ontology_enrichment_celltype=CL:0000738!5.53e-24!140;CL:0000037!5.60e-19!172;CL:0000566!5.60e-19!172;CL:0000988!8.53e-18!182;CL:0002057!6.79e-17!42;CL:0002032!1.17e-16!165;CL:0000837!1.17e-16!165;CL:0002087!2.34e-16!119;CL:0000860!2.84e-16!45;CL:0002031!9.34e-16!124;CL:0000766!2.82e-13!76;CL:0000557!6.91e-11!71;CL:0000763!8.08e-11!112;CL:0000049!8.08e-11!112;CL:0002009!1.16e-10!65;CL:0002194!1.50e-09!63;CL:0000576!1.50e-09!63;CL:0000040!1.50e-09!63;CL:0000559!1.50e-09!63;CL:0000839!2.00e-09!70|ontology_enrichment_celltype_v019=CL:0000453;1.54e-18;5!CL:0000860;2.12e-17;33!CL:0002057;2.12e-17;33!CL:0000451;1.83e-15;10!CL:0000990;4.49e-14;8!CL:0002087;4.72e-12;104!CL:0000576;1.25e-11;48!CL:0000623;2.94e-11;3!CL:0000738;3.93e-11;136!CL:0000473;4.99e-11;39!CL:0000234;4.99e-11;39!CL:0000226;1.48e-10;3!CL:0000842;1.48e-10;3!CL:0000766;4.85e-10;69!CL:0000771;7.35e-09;2!CL:0001014;8.69e-09;2!CL:0001016;8.69e-09;2!CL:0000081;2.64e-08;11!CL:0000094;6.85e-08;8!CL:0000988;9.65e-07;177|ontology_enrichment_celltype_v019_2=CL:0000738,3.74e-46,136;CL:0000037,2.41e-35,168;CL:0000988,9.60e-35,177;CL:0002032,4.02e-30,161;CL:0000837,4.02e-30,161;CL:0002087,1.77e-29,115;CL:0002031,2.65e-28,120;CL:0000860,8.87e-22,42;CL:0002057,8.87e-22,42;CL:0000766,2.85e-21,72;CL:0000763,9.78e-20,108;CL:0000049,9.78e-20,108;CL:0002009,3.52e-19,61;CL:0000557,6.56e-19,67;CL:0000453,1.07e-18,5;CL:0000473,1.70e-18,48;CL:0000234,1.70e-18,48;CL:0002194,9.75e-16,59;CL:0000576,9.75e-16,59;CL:0000040,9.75e-16,59;CL:0000559,9.75e-16,59;CL:0000451,1.11e-15,10;CL:0000839,2.68e-15,66;CL:0000990,2.67e-14,8;CL:0000134,9.77e-13,354;CL:0002320,2.82e-12,361;CL:0000219,1.87e-11,386;CL:0000623,3.01e-11,3;CL:0000825,3.01e-11,3;CL:0000226,2.18e-10,3;CL:0000842,2.18e-10,3;CL:0000838,5.45e-10,52;CL:0000542,9.64e-10,53;CL:0000051,9.64e-10,53;CL:0000048,2.40e-09,427;CL:0000723,4.61e-09,433;CL:0000771,7.39e-09,2;CL:0001014,8.57e-09,2;CL:0001016,8.57e-09,2;CL:0000034,1.07e-08,441;CL:0000081,2.51e-08,11;CL:0000094,6.89e-08,8|ontology_enrichment_development_v019=CL:0002057;2.59e-14;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.87e-11!102;UBERON:0003061!6.87e-11!102;UBERON:0001474!9.52e-10!86;UBERON:0002371!4.08e-09!80;UBERON:0002193!6.25e-09!112;UBERON:0004765!3.62e-08!101;UBERON:0001434!3.62e-08!101;UBERON:0002405!4.52e-07!115|ontology_enrichment_uberon_v019=UBERON:0001905;6.08e-08;2!UBERON:0002757;6.08e-08;2!UBERON:0010134;6.08e-08;2!UBERON:0005408;6.08e-08;2!UBERON:0001899;6.08e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.30e-18,98;UBERON:0003061,3.30e-18,98;UBERON:0002371,1.03e-17,76;UBERON:0001474,5.14e-16,82;UBERON:0002193,6.39e-16,108;UBERON:0004765,4.15e-14,90;UBERON:0002405,1.77e-13,93;UBERON:0002384,1.97e-12,371;UBERON:0001434,3.70e-12,100;UBERON:0001905,9.10e-08,2;UBERON:0002757,9.10e-08,2;UBERON:0010134,9.10e-08,2;UBERON:0005408,9.10e-08,2;UBERON:0001899,9.10e-08,2|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0.152826811495903,0.246301768349837,0.393553906568396,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0.309868802321207,0,0.293600439334847,3.32397245119126,3.00816671205213,1.95309783644267,0,0,0.257575567634187,0.290796477559129,0,0.485168122375632,0.464858073811369,0,1.23882548358041,1.43846196161075,0.512321413058201,1.89185783910868,1.37898272294647,1.93645405075148,0,0.188242339542605,0.545812300115692,1.34834090667051,1.22433556948361,2.56743221660875,1.27867425159808,0.329851300186716,0.398927315243264,0,0.580418477257168,1.13477044938228,0.622822248995575,1.00499466102697,1.0429658368404,0.868755378820466,1.21079900526674,2.94622108790052,2.53169909952708,0.422510572623884,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0.64290234678832,0.285012743741249,0.39783335439818,0,1.75996244461323,0,0,0,0.400395987036012,0,0,0,2.84606484554724,2.34894875748376,3.44045905312706,0,0.560508562981536,0.263384084775077,2.16380747125216,2.75107533924415,2.46721798799411,0,0.32592226663359,0.473447805734733,0,0.445641827540694,0.294605907474837,0.221533894583621,0.541607727530031,0.25618263945135,0.260118695119756,0.164437904603676,0,0,0.444859689486181,0,0,0.113309342697566,0.383220493601921,0,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0,1.41124720257313,1.60464117470104,1.88271725047639,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,1.90792499444274,4.57595928624102,0.371457501329565,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.089299728284079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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=65056 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29520 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000506184_5end | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_8_at_GPBP1_5end | |||
|id=chr5:56469958..56469966,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.53e-24!140;CL:0000037!5.60e-19!172;CL:0000566!5.60e-19!172;CL:0000988!8.53e-18!182;CL:0002057!6.79e-17!42;CL:0002032!1.17e-16!165;CL:0000837!1.17e-16!165;CL:0002087!2.34e-16!119;CL:0000860!2.84e-16!45;CL:0002031!9.34e-16!124;CL:0000766!2.82e-13!76;CL:0000557!6.91e-11!71;CL:0000763!8.08e-11!112;CL:0000049!8.08e-11!112;CL:0002009!1.16e-10!65;CL:0002194!1.50e-09!63;CL:0000576!1.50e-09!63;CL:0000040!1.50e-09!63;CL:0000559!1.50e-09!63;CL:0000839!2.00e-09!70 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.54e-18;5!CL:0000860;2.12e-17;33!CL:0002057;2.12e-17;33!CL:0000451;1.83e-15;10!CL:0000990;4.49e-14;8!CL:0002087;4.72e-12;104!CL:0000576;1.25e-11;48!CL:0000623;2.94e-11;3!CL:0000738;3.93e-11;136!CL:0000473;4.99e-11;39!CL:0000234;4.99e-11;39!CL:0000226;1.48e-10;3!CL:0000842;1.48e-10;3!CL:0000766;4.85e-10;69!CL:0000771;7.35e-09;2!CL:0001014;8.69e-09;2!CL:0001016;8.69e-09;2!CL:0000081;2.64e-08;11!CL:0000094;6.85e-08;8!CL:0000988;9.65e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.74e-46,136;CL:0000037,2.41e-35,168;CL:0000988,9.60e-35,177;CL:0002032,4.02e-30,161;CL:0000837,4.02e-30,161;CL:0002087,1.77e-29,115;CL:0002031,2.65e-28,120;CL:0000860,8.87e-22,42;CL:0002057,8.87e-22,42;CL:0000766,2.85e-21,72;CL:0000763,9.78e-20,108;CL:0000049,9.78e-20,108;CL:0002009,3.52e-19,61;CL:0000557,6.56e-19,67;CL:0000453,1.07e-18,5;CL:0000473,1.70e-18,48;CL:0000234,1.70e-18,48;CL:0002194,9.75e-16,59;CL:0000576,9.75e-16,59;CL:0000040,9.75e-16,59;CL:0000559,9.75e-16,59;CL:0000451,1.11e-15,10;CL:0000839,2.68e-15,66;CL:0000990,2.67e-14,8;CL:0000134,9.77e-13,354;CL:0002320,2.82e-12,361;CL:0000219,1.87e-11,386;CL:0000623,3.01e-11,3;CL:0000825,3.01e-11,3;CL:0000226,2.18e-10,3;CL:0000842,2.18e-10,3;CL:0000838,5.45e-10,52;CL:0000542,9.64e-10,53;CL:0000051,9.64e-10,53;CL:0000048,2.40e-09,427;CL:0000723,4.61e-09,433;CL:0000771,7.39e-09,2;CL:0001014,8.57e-09,2;CL:0001016,8.57e-09,2;CL:0000034,1.07e-08,441;CL:0000081,2.51e-08,11;CL:0000094,6.89e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.59e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.87e-11!102;UBERON:0003061!6.87e-11!102;UBERON:0001474!9.52e-10!86;UBERON:0002371!4.08e-09!80;UBERON:0002193!6.25e-09!112;UBERON:0004765!3.62e-08!101;UBERON:0001434!3.62e-08!101;UBERON:0002405!4.52e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.08e-08;2!UBERON:0002757;6.08e-08;2!UBERON:0010134;6.08e-08;2!UBERON:0005408;6.08e-08;2!UBERON:0001899;6.08e-08;2 | |||
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| |||
|short_description=p8@GPBP1 | |||
}} |
Revision as of 15:57, 13 September 2013
Short description: | p8@GPBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_GPBP1_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 14bp_to_ENST00000506184_5end |
EntrezGene: | GPBP1 |
HGNC: | 29520 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.30e-18 | 98 |
blood island | 3.30e-18 | 98 |
bone marrow | 1.03e-17 | 76 |
bone element | 5.14e-16 | 82 |
hemolymphoid system | 6.39e-16 | 108 |
skeletal element | 4.15e-14 | 90 |
immune system | 1.77e-13 | 93 |
connective tissue | 1.97e-12 | 371 |
skeletal system | 3.70e-12 | 100 |
pineal body | 9.10e-08 | 2 |
regional part of epithalamus | 9.10e-08 | 2 |
secretory circumventricular organ | 9.10e-08 | 2 |
circumventricular organ | 9.10e-08 | 2 |
epithalamus | 9.10e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.