FFCP PHASE1:Hg19::chr5:77806048..77806055,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10184|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=6588|TSSclassifier=S|UniProt=Q6ZUX7|association_with_transcript=7bp_to_BC136335,BC136336_5end|coexpression_cluster_id=C65|description=CAGE_peak_17_at_LHFPL2_5end|id=chr5:77806048..77806055,-|ontology_enrichment_celltype=CL:0002057!3.94e-46!42;CL:0002194!2.10e-45!63;CL:0000576!2.10e-45!63;CL:0000040!2.10e-45!63;CL:0000559!2.10e-45!63;CL:0002009!1.16e-43!65;CL:0000860!2.12e-42!45;CL:0000766!5.62e-40!76;CL:0000839!9.66e-40!70;CL:0000557!5.05e-39!71;CL:0000763!9.44e-25!112;CL:0000049!9.44e-25!112;CL:0002087!3.76e-21!119;CL:0002031!7.74e-20!124;CL:0000738!1.40e-19!140;CL:0002032!8.18e-15!165;CL:0000837!8.18e-15!165;CL:0000037!1.14e-14!172;CL:0000566!1.14e-14!172;CL:0000988!3.24e-13!182;CL:0002619!1.27e-07!3;CL:0000134!6.78e-07!358;CL:0000219!7.43e-07!390|ontology_enrichment_celltype_v019=CL:0000860;1.66e-151;33!CL:0002057;1.66e-151;33!CL:0000473;1.01e-120;39!CL:0000234;1.01e-120;39!CL:0000576;1.33e-70;48!CL:0000766;2.20e-40;69!CL:0000763;6.79e-22;100!CL:0002087;2.63e-17;104!CL:0000738;4.49e-12;136|ontology_enrichment_celltype_v019_2=CL:0000860,8.43e-130,42;CL:0002057,8.43e-130,42;CL:0000473,1.36e-128,48;CL:0000234,1.36e-128,48;CL:0002194,6.93e-102,59;CL:0000576,6.93e-102,59;CL:0000040,6.93e-102,59;CL:0000559,6.93e-102,59;CL:0002009,1.94e-98,61;CL:0000839,1.01e-90,66;CL:0000557,2.59e-89,67;CL:0000766,7.49e-83,72;CL:0000763,8.23e-54,108;CL:0000049,8.23e-54,108;CL:0002087,2.97e-50,115;CL:0002031,5.78e-48,120;CL:0000738,9.29e-42,136;CL:0002032,1.65e-34,161;CL:0000837,1.65e-34,161;CL:0000037,7.32e-33,168;CL:0000988,6.20e-31,177;CL:0000134,8.31e-13,354;CL:0002320,1.88e-12,361;CL:0000219,3.37e-11,386;CL:0000048,1.15e-09,427;CL:0000723,1.88e-09,433;CL:0000034,3.54e-09,441|ontology_enrichment_development_v019=CL:0002057;1.18e-96;42!CL:0000049;1.57e-18;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.03e-35!80;UBERON:0001474!3.83e-32!86;UBERON:0004765!6.31e-29!101;UBERON:0001434!6.31e-29!101;UBERON:0002390!2.66e-25!102;UBERON:0003061!2.66e-25!102;UBERON:0002193!2.73e-23!112;UBERON:0002405!2.22e-22!115;UBERON:0002204!5.98e-21!167;UBERON:0003081!1.06e-10!216;UBERON:0000062!6.08e-07!511|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.75e-78,76;UBERON:0001474,2.91e-72,82;UBERON:0004765,1.83e-65,90;UBERON:0002405,3.26e-63,93;UBERON:0002390,9.19e-60,98;UBERON:0003061,9.19e-60,98;UBERON:0001434,1.77e-58,100;UBERON:0002193,8.23e-54,108;UBERON:0002204,4.34e-33,167;UBERON:0003081,2.57e-26,203;UBERON:0000926,4.53e-15,315;UBERON:0004120,4.53e-15,315;UBERON:0006603,4.53e-15,315;UBERON:0002384,5.75e-12,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0,0.587200878669695,0,0,0,0.671746422719773,0.647787332037959,0.515151135268373,6.97911546141911,10.9584023669755,8.9756102639492,10.4593066607558,16.0355476328512,14.865905802965,4.02769349251011,3.58624989140741,3.78371567821736,3.7922024881028,2.5819387343353,1.35426486594342,9.41211697713024,11.7349644524874,11.2361742222542,4.28517449319264,3.20929027076094,3.19668562899521,3.29851300186716,5.58498241340569,3.83602275479425,4.06292934080018,3.40431134814684,4.35975574296902,5.7787193009051,3.12889751052121,2.82345498116652,4.23779651843358,4.05105399586321,3.16462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.936017060556951,1.0404181360211,0.93733833986777,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.716243852959582,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10184 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6588 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZUX7 | |||
|association_with_transcript=7bp_to_BC136335,BC136336_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_17_at_LHFPL2_5end | |||
|id=chr5:77806048..77806055,- | |||
|ontology_enrichment_celltype=CL:0002057!3.94e-46!42;CL:0002194!2.10e-45!63;CL:0000576!2.10e-45!63;CL:0000040!2.10e-45!63;CL:0000559!2.10e-45!63;CL:0002009!1.16e-43!65;CL:0000860!2.12e-42!45;CL:0000766!5.62e-40!76;CL:0000839!9.66e-40!70;CL:0000557!5.05e-39!71;CL:0000763!9.44e-25!112;CL:0000049!9.44e-25!112;CL:0002087!3.76e-21!119;CL:0002031!7.74e-20!124;CL:0000738!1.40e-19!140;CL:0002032!8.18e-15!165;CL:0000837!8.18e-15!165;CL:0000037!1.14e-14!172;CL:0000566!1.14e-14!172;CL:0000988!3.24e-13!182;CL:0002619!1.27e-07!3;CL:0000134!6.78e-07!358;CL:0000219!7.43e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.66e-151;33!CL:0002057;1.66e-151;33!CL:0000473;1.01e-120;39!CL:0000234;1.01e-120;39!CL:0000576;1.33e-70;48!CL:0000766;2.20e-40;69!CL:0000763;6.79e-22;100!CL:0002087;2.63e-17;104!CL:0000738;4.49e-12;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.43e-130,42;CL:0002057,8.43e-130,42;CL:0000473,1.36e-128,48;CL:0000234,1.36e-128,48;CL:0002194,6.93e-102,59;CL:0000576,6.93e-102,59;CL:0000040,6.93e-102,59;CL:0000559,6.93e-102,59;CL:0002009,1.94e-98,61;CL:0000839,1.01e-90,66;CL:0000557,2.59e-89,67;CL:0000766,7.49e-83,72;CL:0000763,8.23e-54,108;CL:0000049,8.23e-54,108;CL:0002087,2.97e-50,115;CL:0002031,5.78e-48,120;CL:0000738,9.29e-42,136;CL:0002032,1.65e-34,161;CL:0000837,1.65e-34,161;CL:0000037,7.32e-33,168;CL:0000988,6.20e-31,177;CL:0000134,8.31e-13,354;CL:0002320,1.88e-12,361;CL:0000219,3.37e-11,386;CL:0000048,1.15e-09,427;CL:0000723,1.88e-09,433;CL:0000034,3.54e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-96;42!CL:0000049;1.57e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.03e-35!80;UBERON:0001474!3.83e-32!86;UBERON:0004765!6.31e-29!101;UBERON:0001434!6.31e-29!101;UBERON:0002390!2.66e-25!102;UBERON:0003061!2.66e-25!102;UBERON:0002193!2.73e-23!112;UBERON:0002405!2.22e-22!115;UBERON:0002204!5.98e-21!167;UBERON:0003081!1.06e-10!216;UBERON:0000062!6.08e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.75e-78,76;UBERON:0001474,2.91e-72,82;UBERON:0004765,1.83e-65,90;UBERON:0002405,3.26e-63,93;UBERON:0002390,9.19e-60,98;UBERON:0003061,9.19e-60,98;UBERON:0001434,1.77e-58,100;UBERON:0002193,8.23e-54,108;UBERON:0002204,4.34e-33,167;UBERON:0003081,2.57e-26,203;UBERON:0000926,4.53e-15,315;UBERON:0004120,4.53e-15,315;UBERON:0006603,4.53e-15,315;UBERON:0002384,5.75e-12,371 | |||
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|short_description=p17@LHFPL2 | |||
}} |
Revision as of 16:31, 13 September 2013
Short description: | p17@LHFPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_LHFPL2_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 7bp_to_BC136335, BC136336_5end |
EntrezGene: | LHFPL2 |
HGNC: | 6588 |
UniProt: | Q6ZUX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.43e-130 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.43e-130 | 42 |
defensive cell | 1.36e-128 | 48 |
phagocyte | 1.36e-128 | 48 |
monopoietic cell | 6.93e-102 | 59 |
monocyte | 6.93e-102 | 59 |
monoblast | 6.93e-102 | 59 |
promonocyte | 6.93e-102 | 59 |
macrophage dendritic cell progenitor | 1.94e-98 | 61 |
myeloid lineage restricted progenitor cell | 1.01e-90 | 66 |
granulocyte monocyte progenitor cell | 2.59e-89 | 67 |
myeloid leukocyte | 7.49e-83 | 72 |
myeloid cell | 8.23e-54 | 108 |
common myeloid progenitor | 8.23e-54 | 108 |
nongranular leukocyte | 2.97e-50 | 115 |
hematopoietic lineage restricted progenitor cell | 5.78e-48 | 120 |
leukocyte | 9.29e-42 | 136 |
hematopoietic oligopotent progenitor cell | 1.65e-34 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-34 | 161 |
hematopoietic stem cell | 7.32e-33 | 168 |
hematopoietic cell | 6.20e-31 | 177 |
mesenchymal cell | 8.31e-13 | 354 |
connective tissue cell | 1.88e-12 | 361 |
motile cell | 3.37e-11 | 386 |
multi fate stem cell | 1.15e-09 | 427 |
somatic stem cell | 1.88e-09 | 433 |
stem cell | 3.54e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.75e-78 | 76 |
bone element | 2.91e-72 | 82 |
skeletal element | 1.83e-65 | 90 |
immune system | 3.26e-63 | 93 |
hematopoietic system | 9.19e-60 | 98 |
blood island | 9.19e-60 | 98 |
skeletal system | 1.77e-58 | 100 |
hemolymphoid system | 8.23e-54 | 108 |
musculoskeletal system | 4.34e-33 | 167 |
lateral plate mesoderm | 2.57e-26 | 203 |
mesoderm | 4.53e-15 | 315 |
mesoderm-derived structure | 4.53e-15 | 315 |
presumptive mesoderm | 4.53e-15 | 315 |
connective tissue | 5.75e-12 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.