FFCP PHASE1:Mm9::chr19:46380346..46380360,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18034|HGNC=|UniProt=|association_with_transcript=-59bp_to_NM_001177370,uc008hsy.2,uc008hsz.1,uc008hta.1_5end|description=CAGE_peak_6_at_Nfkb2_5end|id=chr19:46380346..46380360,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,4.44e-14,3;CL:0000359,4.44e-14,3;CL:0002539,4.44e-14,3;CL:0000514,4.44e-14,3;CL:0000680,8.36e-12,6;CL:0000187,8.36e-12,6;CL:0000056,8.36e-12,6;CL:0000222,3.88e-10,7;CL:0000355,6.56e-08,9;CL:0000893,3.50e-07,6;CL:0002489,3.50e-07,6;CL:0000898,3.50e-07,6;CL:0000809,3.50e-07,6;CL:0000810,3.50e-07,6;CL:0000895,3.50e-07,6;CL:0000808,3.50e-07,6;CL:0000894,3.50e-07,6;CL:0000806,3.50e-07,6;CL:0000807,3.50e-07,6;CL:0000805,3.50e-07,6;CL:0002425,3.50e-07,6;CL:0002436,3.50e-07,6;CL:0002427,3.50e-07,6;CL:0002428,3.50e-07,6;CL:0002429,3.50e-07,6;CL:0002433,3.50e-07,6;CL:0002431,3.50e-07,6;CL:0002432,3.50e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.42e-12!48;UBERON:0003081!7.88e-11!88;UBERON:0002390!1.78e-10!45;UBERON:0003061!1.78e-10!45;UBERON:0004177!2.27e-07!29;UBERON:0002405!3.27e-07!70;UBERON:0003408!3.34e-07!24;UBERON:0002370!9.40e-07!23;UBERON:0000974!9.40e-07!23;UBERON:0004807!9.40e-07!23;UBERON:0005058!9.40e-07!23;UBERON:0003351!9.40e-07!23;UBERON:0009113!9.40e-07!23;UBERON:0003295!9.40e-07!23;UBERON:0009722!9.40e-07!23;UBERON:0005562!9.40e-07!23;UBERON:0007690!9.40e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.44e-14,3;UBERON:0004237,4.44e-14,3;UBERON:0004695,4.44e-14,3;UBERON:0002111,4.44e-14,3;UBERON:0004178,4.44e-14,3;UBERON:0000947,1.10e-10,4;UBERON:0001637,1.10e-10,4;UBERON:0004573,1.10e-10,4;UBERON:0003509,1.10e-10,4;UBERON:0004571,1.10e-10,4;UBERON:0010191,1.10e-10,4;UBERON:0004572,1.10e-10,4;UBERON:0000055,1.23e-08,5;UBERON:0007500,1.23e-08,5;UBERON:0001981,1.23e-08,5;UBERON:0002049,1.23e-08,5;UBERON:0007798,1.23e-08,5;UBERON:0004537,1.23e-08,5;UBERON:0006965,1.23e-08,5;UBERON:0001134,6.56e-08,9;UBERON:0002036,6.56e-08,9;UBERON:0002385,6.56e-08,9;UBERON:0000486,6.56e-08,9;UBERON:0007503,6.56e-08,9;UBERON:0001015,6.56e-08,9;UBERON:0002329,6.56e-08,9;UBERON:0003082,6.56e-08,9;UBERON:0003059,6.56e-08,9;UBERON:0007282,6.56e-08,9;UBERON:0004290,6.56e-08,9;UBERON:0009618,6.56e-08,9;UBERON:0000383,3.98e-07,10;UBERON:0002465,7.27e-07,3|phase1_expression=0,1.04692622291808,0,0,0,0.16787927191189,0.934450562382103,0.258246646883153,2.53419699873,2.57470978954193,0.513653904676515,1.27635454392538,0.171200729931206,0.174840804837995,0,0,0.699561878128147,1.26184866143295,0.548457734422955,0.42438965179803,0.0850432901510698,0.0992909512008853,0,1.91990907352088,0.91763712426868,1.14846392823004,0,0.861884930743556,0,0,0.443461021310609,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,0,0,0.523523743973798,0,0,0,2.51793635951155,3.04130793658544,1.65192076945513,2.34717403304412,0.218025156380447,0.659058548203415,0.388859798148567,0.139986421625363,0,0.671130424230945,0,0.672187598284928,0.771778308107841,0.573066879877513,1.03134418455488,0,0,0,0,0.889294796111139,0.899899717281399,2.96659908770092,0.7104801149461,0.898800331555214,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0.70667914902068,0,0,0,0,0,0.253359865475099,0,0.11418387971906,2.58937883647172,0.148442139064825,0.346970653532272,0,0.230615497256059,0.452167921657868,0.470354828542819,0,1.23597483867187,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0.41889341362691,1.02182822083437,0.239630249011841,0,0.381210681219194,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,0,0,0.260240885925407,0,0,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0,0.527853372491847,0.219195732427575,0,0.348252166522167,0,0,0,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0.898819408654221,0,0.199141273254367,0.569003702859245,0.114248512609729,1.1270773567308,0,0,0.280543279561274,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0.482354319504834,0,0.287696137450811,0.486405680325106,0,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0.369506380333209,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0,0,3.01582567878545,0.54390568381871,0,0,0,0,0.491804836130026,0,0,0.390438744296638,0,0,0.445597348164788,0,0,0.584511715822624,0.395287777946524,0,0.425820255624806,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0,0.32977250588296,0.484393280087717,0.0603129249281559,0.358117032009409,0.328281799490123,1.1659233465194,0,0.854354403989263,0.619160603889667,0,0.565105371014073,0.683471138605126,0,0,0.279902904647316,0.829199842826543,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0,0.13020438484395,0.314578033277133,0,0,1.26404448251271,0.608175645870493,0.821687657318618,0.909445760844565,0.358053391334963,0.79472541912506,0.360586348559907,0.295379054349154,0.908698049533329,0.457240839929999,0.100826185136841,0.584747284438515,0.384847366561318,0.584384510907845,0,0,0.358855426437903,0.671538465456314,0.579568782096571,0.563047426353546,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.282328141245992,0.0846146078916765,0,0,0.271608227691724,1.12228454331548,0,0,0,0,0,0.249810577937946,0,0.429742108096597,0.57386499620653,0.220591419119515,0|short_description=p6@Nfkb2}} | ||
|EntrezGene=18034 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-59bp_to_NM_001177370,uc008hsy.2,uc008hsz.1,uc008hta.1_5end | |||
|description=CAGE_peak_6_at_Nfkb2_5end | |||
|id=chr19:46380346..46380360,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.44e-14,3;CL:0000359,4.44e-14,3;CL:0002539,4.44e-14,3;CL:0000514,4.44e-14,3;CL:0000680,8.36e-12,6;CL:0000187,8.36e-12,6;CL:0000056,8.36e-12,6;CL:0000222,3.88e-10,7;CL:0000355,6.56e-08,9;CL:0000893,3.50e-07,6;CL:0002489,3.50e-07,6;CL:0000898,3.50e-07,6;CL:0000809,3.50e-07,6;CL:0000810,3.50e-07,6;CL:0000895,3.50e-07,6;CL:0000808,3.50e-07,6;CL:0000894,3.50e-07,6;CL:0000806,3.50e-07,6;CL:0000807,3.50e-07,6;CL:0000805,3.50e-07,6;CL:0002425,3.50e-07,6;CL:0002436,3.50e-07,6;CL:0002427,3.50e-07,6;CL:0002428,3.50e-07,6;CL:0002429,3.50e-07,6;CL:0002433,3.50e-07,6;CL:0002431,3.50e-07,6;CL:0002432,3.50e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.42e-12!48;UBERON:0003081!7.88e-11!88;UBERON:0002390!1.78e-10!45;UBERON:0003061!1.78e-10!45;UBERON:0004177!2.27e-07!29;UBERON:0002405!3.27e-07!70;UBERON:0003408!3.34e-07!24;UBERON:0002370!9.40e-07!23;UBERON:0000974!9.40e-07!23;UBERON:0004807!9.40e-07!23;UBERON:0005058!9.40e-07!23;UBERON:0003351!9.40e-07!23;UBERON:0009113!9.40e-07!23;UBERON:0003295!9.40e-07!23;UBERON:0009722!9.40e-07!23;UBERON:0005562!9.40e-07!23;UBERON:0007690!9.40e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.44e-14,3;UBERON:0004237,4.44e-14,3;UBERON:0004695,4.44e-14,3;UBERON:0002111,4.44e-14,3;UBERON:0004178,4.44e-14,3;UBERON:0000947,1.10e-10,4;UBERON:0001637,1.10e-10,4;UBERON:0004573,1.10e-10,4;UBERON:0003509,1.10e-10,4;UBERON:0004571,1.10e-10,4;UBERON:0010191,1.10e-10,4;UBERON:0004572,1.10e-10,4;UBERON:0000055,1.23e-08,5;UBERON:0007500,1.23e-08,5;UBERON:0001981,1.23e-08,5;UBERON:0002049,1.23e-08,5;UBERON:0007798,1.23e-08,5;UBERON:0004537,1.23e-08,5;UBERON:0006965,1.23e-08,5;UBERON:0001134,6.56e-08,9;UBERON:0002036,6.56e-08,9;UBERON:0002385,6.56e-08,9;UBERON:0000486,6.56e-08,9;UBERON:0007503,6.56e-08,9;UBERON:0001015,6.56e-08,9;UBERON:0002329,6.56e-08,9;UBERON:0003082,6.56e-08,9;UBERON:0003059,6.56e-08,9;UBERON:0007282,6.56e-08,9;UBERON:0004290,6.56e-08,9;UBERON:0009618,6.56e-08,9;UBERON:0000383,3.98e-07,10;UBERON:0002465,7.27e-07,3 | |||
|phase1_expression=0,1.04692622291808,0,0,0,0.16787927191189,0.934450562382103,0.258246646883153,2.53419699873,2.57470978954193,0.513653904676515,1.27635454392538,0.171200729931206,0.174840804837995,0,0,0.699561878128147,1.26184866143295,0.548457734422955,0.42438965179803,0.0850432901510698,0.0992909512008853,0,1.91990907352088,0.91763712426868,1.14846392823004,0,0.861884930743556,0,0,0.443461021310609,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,0,0,0.523523743973798,0,0,0,2.51793635951155,3.04130793658544,1.65192076945513,2.34717403304412,0.218025156380447,0.659058548203415,0.388859798148567,0.139986421625363,0,0.671130424230945,0,0.672187598284928,0.771778308107841,0.573066879877513,1.03134418455488,0,0,0,0,0.889294796111139,0.899899717281399,2.96659908770092,0.7104801149461,0.898800331555214,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0.70667914902068,0,0,0,0,0,0.253359865475099,0,0.11418387971906,2.58937883647172,0.148442139064825,0.346970653532272,0,0.230615497256059,0.452167921657868,0.470354828542819,0,1.23597483867187,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0.41889341362691,1.02182822083437,0.239630249011841,0,0.381210681219194,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,0,0,0.260240885925407,0,0,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0,0.527853372491847,0.219195732427575,0,0.348252166522167,0,0,0,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0.898819408654221,0,0.199141273254367,0.569003702859245,0.114248512609729,1.1270773567308,0,0,0.280543279561274,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0.482354319504834,0,0.287696137450811,0.486405680325106,0,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0.369506380333209,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0,0,3.01582567878545,0.54390568381871,0,0,0,0,0.491804836130026,0,0,0.390438744296638,0,0,0.445597348164788,0,0,0.584511715822624,0.395287777946524,0,0.425820255624806,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0,0.32977250588296,0.484393280087717,0.0603129249281559,0.358117032009409,0.328281799490123,1.1659233465194,0,0.854354403989263,0.619160603889667,0,0.565105371014073,0.683471138605126,0,0,0.279902904647316,0.829199842826543,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0,0.13020438484395,0.314578033277133,0,0,1.26404448251271,0.608175645870493,0.821687657318618,0.909445760844565,0.358053391334963,0.79472541912506,0.360586348559907,0.295379054349154,0.908698049533329,0.457240839929999,0.100826185136841,0.584747284438515,0.384847366561318,0.584384510907845,0,0,0.358855426437903,0.671538465456314,0.579568782096571,0.563047426353546,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.282328141245992,0.0846146078916765,0,0,0.271608227691724,1.12228454331548,0,0,0,0,0,0.249810577937946,0,0.429742108096597,0.57386499620653,0.220591419119515,0 | |||
|short_description=p6@Nfkb2 | |||
}} |
Revision as of 17:50, 13 September 2013
Short description: | p6@Nfkb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Nfkb2_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_NM_001177370, uc008hsy.2, uc008hsz.1, uc008hta.1_5end |
EntrezGene: | Nfkb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 4.44e-14 | 3 |
blood vessel smooth muscle | 4.44e-14 | 3 |
arterial system smooth muscle | 4.44e-14 | 3 |
artery smooth muscle tissue | 4.44e-14 | 3 |
aorta smooth muscle tissue | 4.44e-14 | 3 |
aorta | 1.10e-10 | 4 |
artery | 1.10e-10 | 4 |
systemic artery | 1.10e-10 | 4 |
arterial blood vessel | 1.10e-10 | 4 |
systemic arterial system | 1.10e-10 | 4 |
aortic system | 1.10e-10 | 4 |
arterial system | 1.10e-10 | 4 |
vessel | 1.23e-08 | 5 |
epithelial tube open at both ends | 1.23e-08 | 5 |
blood vessel | 1.23e-08 | 5 |
vasculature | 1.23e-08 | 5 |
vascular system | 1.23e-08 | 5 |
blood vasculature | 1.23e-08 | 5 |
vascular cord | 1.23e-08 | 5 |
skeletal muscle tissue | 6.56e-08 | 9 |
striated muscle tissue | 6.56e-08 | 9 |
muscle tissue | 6.56e-08 | 9 |
multilaminar epithelium | 6.56e-08 | 9 |
epithelial vesicle | 6.56e-08 | 9 |
musculature | 6.56e-08 | 9 |
somite | 6.56e-08 | 9 |
myotome | 6.56e-08 | 9 |
presomitic mesoderm | 6.56e-08 | 9 |
presumptive segmental plate | 6.56e-08 | 9 |
dermomyotome | 6.56e-08 | 9 |
trunk paraxial mesoderm | 6.56e-08 | 9 |
musculature of body | 3.98e-07 | 10 |
lymphoid system | 7.27e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.