FFCP PHASE1:Hg19::chr6:138428294..138428318,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64065|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17637|TSSclassifier=S|UniProt=|association_with_transcript=159bp_to_DQ892670,EU176724_5end|coexpression_cluster_id=C1043|description=CAGE_peak_5_at_PERP_5end|id=chr6:138428294..138428318,-|ontology_enrichment_celltype=CL:0000066!1.04e-27!254;CL:0000223!4.37e-11!59;CL:0002076!6.46e-11!43;CL:0002251!1.04e-09!21;CL:0000220!3.04e-08!246;CL:0002321!3.49e-08!248;CL:0002077!2.28e-07!33;CL:0002159!9.40e-07!13|ontology_enrichment_celltype_v019=CL:0002159;5.62e-14;14!CL:0000349;1.75e-09;19!CL:0000622;3.29e-09;5!CL:0002621;5.24e-09;3!CL:0002577;7.84e-08;3!CL:0000154;1.18e-07;6!CL:0002076;1.38e-07;42!CL:0002251;1.67e-07;20!CL:0000240;2.11e-07;6!CL:0000311;2.11e-07;6!CL:0000079;2.11e-07;6!CL:0000237;2.11e-07;6!CL:0002077;2.53e-07;34!CL:0000362;2.88e-07;9|ontology_enrichment_celltype_v019_2=CL:0002159,7.37e-14,14;CL:0000066,1.28e-11,253;CL:0000349,1.30e-09,19;CL:0000622,4.23e-09,5;CL:0002076,4.73e-09,42;CL:0002621,6.46e-09,3;CL:0002077,2.54e-08,34;CL:0002577,2.89e-08,3;CL:0000223,1.07e-07,58;CL:0000154,1.44e-07,6;CL:0002251,1.85e-07,20;CL:0000240,2.64e-07,6;CL:0000311,2.64e-07,6;CL:0000079,2.64e-07,6;CL:0000237,2.64e-07,6;CL:0000036,2.64e-07,6;CL:0000357,2.64e-07,6;CL:0000114,2.64e-07,6;CL:0000362,4.09e-07,9|ontology_enrichment_development_v019=CL:0000357;2.11e-07;6!CL:0000114;2.11e-07;6|ontology_enrichment_disease=DOID:305!2.98e-12!106;DOID:0050687!1.24e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!9.42e-16!169;UBERON:0000925!9.42e-16!169;UBERON:0006595!9.42e-16!169;UBERON:0000161!1.10e-12!35;UBERON:0001007!5.30e-12!155;UBERON:0001555!5.30e-12!155;UBERON:0007026!5.30e-12!155;UBERON:0000166!3.24e-10!21;UBERON:0001004!9.89e-10!72;UBERON:0004921!4.39e-09!129;UBERON:0004185!4.39e-09!129;UBERON:0003102!7.54e-09!95;UBERON:0000077!1.51e-08!130;UBERON:0005156!1.54e-07!59;UBERON:0000990!1.54e-07!59;UBERON:0000165!3.06e-07!28;UBERON:0000930!3.06e-07!28;UBERON:0005911!7.45e-07!82|ontology_enrichment_uberon_v019=UBERON:0000165;4.21e-11;28!UBERON:0000486;7.81e-10;12!UBERON:0000161;8.56e-10;19!UBERON:0000166;8.56e-10;19!UBERON:0005631;2.99e-09;10!UBERON:0000158;2.99e-09;10!UBERON:0001949;5.24e-09;3!UBERON:0000365;2.60e-08;5!UBERON:0001044;2.97e-07;6!UBERON:0003293;2.97e-07;6!UBERON:0003294;2.97e-07;6!UBERON:0010047;2.97e-07;6!UBERON:0003408;2.97e-07;6!UBERON:0000167;2.97e-07;6!UBERON:0000478;3.84e-07;24!UBERON:0007811;6.12e-07;52!UBERON:0005910;6.39e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.04e-13,14;UBERON:0000158,1.04e-13,14;UBERON:0003102,2.16e-13,99;UBERON:0000161,9.57e-13,36;UBERON:0000166,2.92e-12,22;UBERON:0000033,1.08e-10,56;UBERON:0000153,1.64e-10,62;UBERON:0007811,1.64e-10,62;UBERON:0000165,1.66e-10,29;UBERON:0000930,1.66e-10,29;UBERON:0003124,6.09e-09,7;UBERON:0001949,6.46e-09,3;UBERON:0004119,1.75e-08,160;UBERON:0000925,1.75e-08,160;UBERON:0006595,1.75e-08,160;UBERON:0000365,1.86e-08,5;UBERON:0001444,1.99e-08,49;UBERON:0005795,8.65e-08,22;UBERON:0001004,1.34e-07,74;UBERON:0000478,3.07e-07,24;UBERON:0001044,3.99e-07,6;UBERON:0003293,3.99e-07,6;UBERON:0003294,3.99e-07,6;UBERON:0010047,3.99e-07,6;UBERON:0000167,3.99e-07,6;UBERON:0005910,4.85e-07,6|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0.872338524100369,2.53299878168311,0,0,0.491467873003018,0.697801167972428,1.52908960491121,0.263766978228454,0.495065411840187,0.331397375727916,0,0,0,0.975865597581014,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0.90361775633475,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0,0,0,1.30361867064741,0,0,0.0945348171640679,0.665188192387692,0.43917392846563,0.196468613246569,1.45718115317017,2.96627554227544,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0,0.732186172644509,0,0,0,0.22452937262617,0,0,0,0.366403487860815,0,0,1.3082821564276,0,0.379891534993739,0.132409180813219,0,0,0.560677600142307,0,0,0,0.269421344139376,0.163461903113459,0,0.576175924479999,0.468642863667593,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0.421352420106746,0.408308342509787,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0.309157587715317,0,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0.646584227275248,0,0.201504196455281,0.169560592310488,2.12586938479627,2.18196896472668,3.72845974005705,0.243947412259191,0,0.464775771478074,0.10366105501537,0,0,0,0,0,0,0,0.828147600278907,0.842923450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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64065 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17637 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=159bp_to_DQ892670,EU176724_5end | |||
|coexpression_cluster_id=C1043 | |||
|description=CAGE_peak_5_at_PERP_5end | |||
|id=chr6:138428294..138428318,- | |||
|ontology_enrichment_celltype=CL:0000066!1.04e-27!254;CL:0000223!4.37e-11!59;CL:0002076!6.46e-11!43;CL:0002251!1.04e-09!21;CL:0000220!3.04e-08!246;CL:0002321!3.49e-08!248;CL:0002077!2.28e-07!33;CL:0002159!9.40e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002159;5.62e-14;14!CL:0000349;1.75e-09;19!CL:0000622;3.29e-09;5!CL:0002621;5.24e-09;3!CL:0002577;7.84e-08;3!CL:0000154;1.18e-07;6!CL:0002076;1.38e-07;42!CL:0002251;1.67e-07;20!CL:0000240;2.11e-07;6!CL:0000311;2.11e-07;6!CL:0000079;2.11e-07;6!CL:0000237;2.11e-07;6!CL:0002077;2.53e-07;34!CL:0000362;2.88e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,7.37e-14,14;CL:0000066,1.28e-11,253;CL:0000349,1.30e-09,19;CL:0000622,4.23e-09,5;CL:0002076,4.73e-09,42;CL:0002621,6.46e-09,3;CL:0002077,2.54e-08,34;CL:0002577,2.89e-08,3;CL:0000223,1.07e-07,58;CL:0000154,1.44e-07,6;CL:0002251,1.85e-07,20;CL:0000240,2.64e-07,6;CL:0000311,2.64e-07,6;CL:0000079,2.64e-07,6;CL:0000237,2.64e-07,6;CL:0000036,2.64e-07,6;CL:0000357,2.64e-07,6;CL:0000114,2.64e-07,6;CL:0000362,4.09e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.11e-07;6!CL:0000114;2.11e-07;6 | |||
|ontology_enrichment_disease=DOID:305!2.98e-12!106;DOID:0050687!1.24e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!9.42e-16!169;UBERON:0000925!9.42e-16!169;UBERON:0006595!9.42e-16!169;UBERON:0000161!1.10e-12!35;UBERON:0001007!5.30e-12!155;UBERON:0001555!5.30e-12!155;UBERON:0007026!5.30e-12!155;UBERON:0000166!3.24e-10!21;UBERON:0001004!9.89e-10!72;UBERON:0004921!4.39e-09!129;UBERON:0004185!4.39e-09!129;UBERON:0003102!7.54e-09!95;UBERON:0000077!1.51e-08!130;UBERON:0005156!1.54e-07!59;UBERON:0000990!1.54e-07!59;UBERON:0000165!3.06e-07!28;UBERON:0000930!3.06e-07!28;UBERON:0005911!7.45e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;4.21e-11;28!UBERON:0000486;7.81e-10;12!UBERON:0000161;8.56e-10;19!UBERON:0000166;8.56e-10;19!UBERON:0005631;2.99e-09;10!UBERON:0000158;2.99e-09;10!UBERON:0001949;5.24e-09;3!UBERON:0000365;2.60e-08;5!UBERON:0001044;2.97e-07;6!UBERON:0003293;2.97e-07;6!UBERON:0003294;2.97e-07;6!UBERON:0010047;2.97e-07;6!UBERON:0003408;2.97e-07;6!UBERON:0000167;2.97e-07;6!UBERON:0000478;3.84e-07;24!UBERON:0007811;6.12e-07;52!UBERON:0005910;6.39e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.04e-13,14;UBERON:0000158,1.04e-13,14;UBERON:0003102,2.16e-13,99;UBERON:0000161,9.57e-13,36;UBERON:0000166,2.92e-12,22;UBERON:0000033,1.08e-10,56;UBERON:0000153,1.64e-10,62;UBERON:0007811,1.64e-10,62;UBERON:0000165,1.66e-10,29;UBERON:0000930,1.66e-10,29;UBERON:0003124,6.09e-09,7;UBERON:0001949,6.46e-09,3;UBERON:0004119,1.75e-08,160;UBERON:0000925,1.75e-08,160;UBERON:0006595,1.75e-08,160;UBERON:0000365,1.86e-08,5;UBERON:0001444,1.99e-08,49;UBERON:0005795,8.65e-08,22;UBERON:0001004,1.34e-07,74;UBERON:0000478,3.07e-07,24;UBERON:0001044,3.99e-07,6;UBERON:0003293,3.99e-07,6;UBERON:0003294,3.99e-07,6;UBERON:0010047,3.99e-07,6;UBERON:0000167,3.99e-07,6;UBERON:0005910,4.85e-07,6 | |||
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| |||
|short_description=p5@PERP | |||
}} |
Revision as of 18:20, 13 September 2013
Short description: | p5@PERP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PERP_5end |
Coexpression cluster: | C1043_keratoacanthoma_Prostate_tongue_amniotic_salivary_skin_esophagus |
Association with transcript: | 159bp_to_DQ892670, EU176724_5end |
EntrezGene: | PERP |
HGNC: | 17637 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 7.37e-14 | 14 |
epithelial cell | 1.28e-11 | 253 |
extraembryonic cell | 1.30e-09 | 19 |
acinar cell | 4.23e-09 | 5 |
endo-epithelial cell | 4.73e-09 | 42 |
gingival epithelial cell | 6.46e-09 | 3 |
ecto-epithelial cell | 2.54e-08 | 34 |
placental epithelial cell | 2.89e-08 | 3 |
endodermal cell | 1.07e-07 | 58 |
protein secreting cell | 1.44e-07 | 6 |
epithelial cell of alimentary canal | 1.85e-07 | 20 |
stratified squamous epithelial cell | 2.64e-07 | 6 |
keratin accumulating cell | 2.64e-07 | 6 |
stratified epithelial cell | 2.64e-07 | 6 |
keratinizing barrier epithelial cell | 2.64e-07 | 6 |
epithelial fate stem cell | 2.64e-07 | 6 |
stratified epithelial stem cell | 2.64e-07 | 6 |
surface ectodermal cell | 2.64e-07 | 6 |
epidermal cell | 4.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.04e-13 | 14 |
membranous layer | 1.04e-13 | 14 |
surface structure | 2.16e-13 | 99 |
orifice | 9.57e-13 | 36 |
oral opening | 2.92e-12 | 22 |
head | 1.08e-10 | 56 |
anterior region of body | 1.64e-10 | 62 |
craniocervical region | 1.64e-10 | 62 |
mouth | 1.66e-10 | 29 |
stomodeum | 1.66e-10 | 29 |
chorion | 6.09e-09 | 7 |
gingival epithelium | 6.46e-09 | 3 |
endoderm-derived structure | 1.75e-08 | 160 |
endoderm | 1.75e-08 | 160 |
presumptive endoderm | 1.75e-08 | 160 |
urothelium | 1.86e-08 | 5 |
subdivision of head | 1.99e-08 | 49 |
embryonic uterus | 8.65e-08 | 22 |
respiratory system | 1.34e-07 | 74 |
extraembryonic structure | 3.07e-07 | 24 |
saliva-secreting gland | 3.99e-07 | 6 |
gland of oral region | 3.99e-07 | 6 |
gland of foregut | 3.99e-07 | 6 |
oral gland | 3.99e-07 | 6 |
oral cavity | 3.99e-07 | 6 |
transitional epithelium | 4.85e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.