FFCP PHASE1:Hg19::chr6:149806523..149806601,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=340152|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21175|TSSclassifier=N|UniProt=A2A288|association_with_transcript=-326bp_to_ENST00000409806_5end|coexpression_cluster_id=C80|description=CAGE_peak_3_at_ZC3H12D_5end|id=chr6:149806523..149806601,-|ontology_enrichment_celltype=CL:0000738!1.06e-65!140;CL:0002031!3.18e-54!124;CL:0002087!2.18e-53!119;CL:0000037!2.19e-53!172;CL:0000566!2.19e-53!172;CL:0000988!7.34e-53!182;CL:0002032!3.36e-51!165;CL:0000837!3.36e-51!165;CL:0000766!1.48e-28!76;CL:0000542!2.14e-28!53;CL:0000051!2.14e-28!53;CL:0000838!8.61e-28!52;CL:0000557!1.04e-25!71;CL:0002009!2.87e-23!65;CL:0000839!4.91e-23!70;CL:0000763!9.83e-23!112;CL:0000049!9.83e-23!112;CL:0002194!3.58e-21!63;CL:0000576!3.58e-21!63;CL:0000040!3.58e-21!63;CL:0000559!3.58e-21!63;CL:0002057!5.82e-17!42;CL:0000860!3.35e-15!45;CL:0000945!5.08e-14!24;CL:0000826!5.08e-14!24;CL:0000134!6.50e-14!358;CL:0002320!4.50e-13!365;CL:0000791!6.04e-12!18;CL:0000789!6.04e-12!18;CL:0002420!6.04e-12!18;CL:0002419!6.04e-12!18;CL:0000790!6.04e-12!18;CL:0000084!1.28e-11!25;CL:0000827!1.28e-11!25;CL:0000219!3.48e-10!390;CL:0000990!4.85e-10!8;CL:0000236!8.93e-10!14;CL:0002393!1.54e-09!9;CL:0002397!1.54e-09!9;CL:0000624!4.35e-09!6;CL:0000080!7.03e-08!6;CL:0000451!8.35e-08!10;CL:0000840!3.55e-07!5;CL:0001029!3.55e-07!5;CL:0000453!3.58e-07!5;CL:0000048!6.16e-07!430|ontology_enrichment_celltype_v019=CL:0000542;2.18e-20;53!CL:0000945;3.14e-18;24!CL:0000624;3.61e-16;6!CL:0000236;8.46e-15;13!CL:0002087;2.72e-11;104!CL:0000791;5.54e-11;18!CL:0000789;5.54e-11;18!CL:0002419;5.54e-11;18!CL:0000084;5.68e-11;25!CL:0000738;7.10e-11;136!CL:0000094;9.34e-11;8!CL:0000235;3.35e-10;6!CL:0000081;4.03e-10;11!CL:0000623;2.39e-09;3!CL:0002619;2.61e-08;3!CL:0000898;2.81e-08;3!CL:0000767;3.36e-08;3!CL:0000766;6.17e-08;69!CL:0002393;3.04e-07;6!CL:0002397;3.04e-07;6!CL:0000988;4.63e-07;177!CL:0001014;4.89e-07;2!CL:0001016;4.89e-07;2|ontology_enrichment_celltype_v019_2=CL:0000738,1.50e-54,136;CL:0002031,9.15e-44,120;CL:0000988,2.76e-43,177;CL:0000037,2.76e-41,168;CL:0002032,3.32e-40,161;CL:0000837,3.32e-40,161;CL:0002087,2.37e-39,115;CL:0000838,3.53e-33,52;CL:0000542,2.14e-32,53;CL:0000051,2.14e-32,53;CL:0000945,4.07e-18,24;CL:0000826,4.07e-18,24;CL:0000766,1.22e-17,72;CL:0000624,2.55e-16,6;CL:0000557,1.16e-13,67;CL:0000236,1.62e-13,14;CL:0000763,9.12e-13,108;CL:0000049,9.12e-13,108;CL:0000134,1.93e-12,354;CL:0002320,6.47e-12,361;CL:0000791,4.71e-11,18;CL:0000789,4.71e-11,18;CL:0002420,4.71e-11,18;CL:0002419,4.71e-11,18;CL:0000790,4.71e-11,18;CL:0000084,4.92e-11,25;CL:0000827,4.92e-11,25;CL:0000839,5.23e-11,66;CL:0002009,5.46e-11,61;CL:0000094,1.14e-10,8;CL:0000235,3.39e-10,6;CL:0000219,4.46e-10,386;CL:0000081,5.36e-10,11;CL:0000623,2.40e-09,3;CL:0000825,2.40e-09,3;CL:0002194,9.15e-09,59;CL:0000576,9.15e-09,59;CL:0000040,9.15e-09,59;CL:0000559,9.15e-09,59;CL:0000898,2.03e-08,3;CL:0002619,2.42e-08,3;CL:0000767,4.43e-08,3;CL:0000473,6.91e-08,48;CL:0000234,6.91e-08,48;CL:0000048,7.34e-08,427;CL:0000034,1.05e-07,441;CL:0000723,1.47e-07,433;CL:0001014,4.89e-07,2;CL:0001016,4.89e-07,2;CL:0002393,7.72e-07,9;CL:0002397,7.72e-07,9|ontology_enrichment_development_v019=CL:0000051;2.18e-20;53!CL:0000790;5.54e-11;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.75e-34!102;UBERON:0003061!2.75e-34!102;UBERON:0002193!8.90e-32!112;UBERON:0002371!3.62e-22!80;UBERON:0002405!6.74e-21!115;UBERON:0001474!1.51e-19!86;UBERON:0004765!2.88e-15!101;UBERON:0001434!2.88e-15!101;UBERON:0002384!2.32e-12!375;UBERON:0000178!7.10e-08!15;UBERON:0000179!7.10e-08!15;UBERON:0000463!7.10e-08!15;UBERON:0003081!1.73e-07!216;UBERON:0004177!2.22e-07!7|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.46e-16,98;UBERON:0003061,5.46e-16,98;UBERON:0002193,6.94e-15,108;UBERON:0002405,2.84e-12,93;UBERON:0002371,2.25e-11,76;UBERON:0002384,3.35e-11,371;UBERON:0001474,3.89e-10,82;UBERON:0004765,9.42e-09,90;UBERON:0001434,2.37e-07,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43197753338117,4.35133124084712,4.64393609750708,3.54027849164014,3.0706351847777,1.23852898652861,0,0,0,0,0.284338464974843,0.293600439334847,3.32397245119126,7.82123345133553,6.2933152507597,1.79132379391939,4.21061765824673,3.34848237924443,0.290796477559129,0,0.242584061187816,2.78914844286822,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0,1.35426486594342,0.564727018627814,0,0.224723484445085,1.83650335422542,0.320929027076094,1.27867425159808,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,1.21079900526674,0.368277635987565,0,1.26753171787165,0.212604299965044,0.209658645508376,0.336985893439485,0.300353785683013,0.48217676009124,1.14005097496499,0.39783335439818,0.182664153764634,0,2.18455444504853,3.55803701545422,2.98711155796555,1.20118796110804,1.1495048799089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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=340152 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21175 | |||
|TSSclassifier=N | |||
|UniProt=A2A288 | |||
|association_with_transcript=-326bp_to_ENST00000409806_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_3_at_ZC3H12D_5end | |||
|id=chr6:149806523..149806601,- | |||
|ontology_enrichment_celltype=CL:0000738!1.06e-65!140;CL:0002031!3.18e-54!124;CL:0002087!2.18e-53!119;CL:0000037!2.19e-53!172;CL:0000566!2.19e-53!172;CL:0000988!7.34e-53!182;CL:0002032!3.36e-51!165;CL:0000837!3.36e-51!165;CL:0000766!1.48e-28!76;CL:0000542!2.14e-28!53;CL:0000051!2.14e-28!53;CL:0000838!8.61e-28!52;CL:0000557!1.04e-25!71;CL:0002009!2.87e-23!65;CL:0000839!4.91e-23!70;CL:0000763!9.83e-23!112;CL:0000049!9.83e-23!112;CL:0002194!3.58e-21!63;CL:0000576!3.58e-21!63;CL:0000040!3.58e-21!63;CL:0000559!3.58e-21!63;CL:0002057!5.82e-17!42;CL:0000860!3.35e-15!45;CL:0000945!5.08e-14!24;CL:0000826!5.08e-14!24;CL:0000134!6.50e-14!358;CL:0002320!4.50e-13!365;CL:0000791!6.04e-12!18;CL:0000789!6.04e-12!18;CL:0002420!6.04e-12!18;CL:0002419!6.04e-12!18;CL:0000790!6.04e-12!18;CL:0000084!1.28e-11!25;CL:0000827!1.28e-11!25;CL:0000219!3.48e-10!390;CL:0000990!4.85e-10!8;CL:0000236!8.93e-10!14;CL:0002393!1.54e-09!9;CL:0002397!1.54e-09!9;CL:0000624!4.35e-09!6;CL:0000080!7.03e-08!6;CL:0000451!8.35e-08!10;CL:0000840!3.55e-07!5;CL:0001029!3.55e-07!5;CL:0000453!3.58e-07!5;CL:0000048!6.16e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.18e-20;53!CL:0000945;3.14e-18;24!CL:0000624;3.61e-16;6!CL:0000236;8.46e-15;13!CL:0002087;2.72e-11;104!CL:0000791;5.54e-11;18!CL:0000789;5.54e-11;18!CL:0002419;5.54e-11;18!CL:0000084;5.68e-11;25!CL:0000738;7.10e-11;136!CL:0000094;9.34e-11;8!CL:0000235;3.35e-10;6!CL:0000081;4.03e-10;11!CL:0000623;2.39e-09;3!CL:0002619;2.61e-08;3!CL:0000898;2.81e-08;3!CL:0000767;3.36e-08;3!CL:0000766;6.17e-08;69!CL:0002393;3.04e-07;6!CL:0002397;3.04e-07;6!CL:0000988;4.63e-07;177!CL:0001014;4.89e-07;2!CL:0001016;4.89e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.50e-54,136;CL:0002031,9.15e-44,120;CL:0000988,2.76e-43,177;CL:0000037,2.76e-41,168;CL:0002032,3.32e-40,161;CL:0000837,3.32e-40,161;CL:0002087,2.37e-39,115;CL:0000838,3.53e-33,52;CL:0000542,2.14e-32,53;CL:0000051,2.14e-32,53;CL:0000945,4.07e-18,24;CL:0000826,4.07e-18,24;CL:0000766,1.22e-17,72;CL:0000624,2.55e-16,6;CL:0000557,1.16e-13,67;CL:0000236,1.62e-13,14;CL:0000763,9.12e-13,108;CL:0000049,9.12e-13,108;CL:0000134,1.93e-12,354;CL:0002320,6.47e-12,361;CL:0000791,4.71e-11,18;CL:0000789,4.71e-11,18;CL:0002420,4.71e-11,18;CL:0002419,4.71e-11,18;CL:0000790,4.71e-11,18;CL:0000084,4.92e-11,25;CL:0000827,4.92e-11,25;CL:0000839,5.23e-11,66;CL:0002009,5.46e-11,61;CL:0000094,1.14e-10,8;CL:0000235,3.39e-10,6;CL:0000219,4.46e-10,386;CL:0000081,5.36e-10,11;CL:0000623,2.40e-09,3;CL:0000825,2.40e-09,3;CL:0002194,9.15e-09,59;CL:0000576,9.15e-09,59;CL:0000040,9.15e-09,59;CL:0000559,9.15e-09,59;CL:0000898,2.03e-08,3;CL:0002619,2.42e-08,3;CL:0000767,4.43e-08,3;CL:0000473,6.91e-08,48;CL:0000234,6.91e-08,48;CL:0000048,7.34e-08,427;CL:0000034,1.05e-07,441;CL:0000723,1.47e-07,433;CL:0001014,4.89e-07,2;CL:0001016,4.89e-07,2;CL:0002393,7.72e-07,9;CL:0002397,7.72e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000051;2.18e-20;53!CL:0000790;5.54e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.75e-34!102;UBERON:0003061!2.75e-34!102;UBERON:0002193!8.90e-32!112;UBERON:0002371!3.62e-22!80;UBERON:0002405!6.74e-21!115;UBERON:0001474!1.51e-19!86;UBERON:0004765!2.88e-15!101;UBERON:0001434!2.88e-15!101;UBERON:0002384!2.32e-12!375;UBERON:0000178!7.10e-08!15;UBERON:0000179!7.10e-08!15;UBERON:0000463!7.10e-08!15;UBERON:0003081!1.73e-07!216;UBERON:0004177!2.22e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.46e-16,98;UBERON:0003061,5.46e-16,98;UBERON:0002193,6.94e-15,108;UBERON:0002405,2.84e-12,93;UBERON:0002371,2.25e-11,76;UBERON:0002384,3.35e-11,371;UBERON:0001474,3.89e-10,82;UBERON:0004765,9.42e-09,90;UBERON:0001434,2.37e-07,100 | |||
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|short_description=p3@ZC3H12D | |||
}} |
Revision as of 18:41, 13 September 2013
Short description: | p3@ZC3H12D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ZC3H12D_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -326bp_to_ENST00000409806_5end |
EntrezGene: | ZC3H12D |
HGNC: | 21175 |
UniProt: | A2A288 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.46e-16 | 98 |
blood island | 5.46e-16 | 98 |
hemolymphoid system | 6.94e-15 | 108 |
immune system | 2.84e-12 | 93 |
bone marrow | 2.25e-11 | 76 |
connective tissue | 3.35e-11 | 371 |
bone element | 3.89e-10 | 82 |
skeletal element | 9.42e-09 | 90 |
skeletal system | 2.37e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.