Personal tools

FFCP PHASE1:Mm9::chr1:183750776..183750778,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=411|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:183750776..183750778,-|id=chr1:183750776..183750778,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,1.17e-08,32;CL:0002032,1.17e-08,32;CL:0000037,1.17e-08,32;CL:0000837,1.17e-08,32;CL:0000049,4.23e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!1.84e-08!51;UBERON:0002405!3.71e-08!70;UBERON:0004177!5.93e-08!29;UBERON:0002390!1.62e-07!45;UBERON:0003061!1.62e-07!45;UBERON:0002193!5.74e-07!48;UBERON:0000926!9.58e-07!193;UBERON:0004120!9.58e-07!193;UBERON:0006603!9.58e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.16e-17,45;UBERON:0003061,6.16e-17,45;UBERON:0002193,2.14e-15,48;UBERON:0002405,2.14e-15,48;UBERON:0004177,1.71e-13,29;UBERON:0005057,1.71e-13,29;UBERON:0000077,2.71e-10,35;UBERON:0002370,4.03e-10,23;UBERON:0000974,4.03e-10,23;UBERON:0004807,4.03e-10,23;UBERON:0005058,4.03e-10,23;UBERON:0003351,4.03e-10,23;UBERON:0009113,4.03e-10,23;UBERON:0003295,4.03e-10,23;UBERON:0009722,4.03e-10,23;UBERON:0005562,4.03e-10,23;UBERON:0007690,4.03e-10,23;UBERON:0006562,1.53e-09,24;UBERON:0003408,1.53e-09,24;UBERON:0001557,1.53e-09,24;UBERON:0001042,1.53e-09,24;UBERON:0008814,1.53e-09,24;UBERON:0009145,1.53e-09,24;UBERON:0001041,3.88e-09,80;UBERON:0000072,4.48e-08,27;UBERON:0000490,2.14e-07,66;UBERON:0003081,2.96e-07,87;UBERON:0003929,6.79e-07,55;UBERON:0007811,7.20e-07,36|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,1.29123323441576,2.25261955442667,0.936258105287974,0.171217968225505,0.239316476986009,0.856003649656029,1.57356724354195,3.66420737997229,2.02475267389826,3.49780939064073,0.946386496074713,1.37114433605739,1.27316895539409,0.340173160604279,1.39007331681239,1.04479915655574,0.47997726838022,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,6.27797446105362,4.6880120671428,6.80580867165938,13.5293242247133,6.83045484958446,5.82612423637384,0.503587271902309,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0.838913030288682,0.725362142011344,1.00828139742739,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,0,0.220868540951614,0.367472397644862,0.287536413054709,0,0,0,0,0.131886287730194,0.182975287204819,0,0.558365998002762,0,0.15279824777681,0,0,0.372798891650601,0.151452386666368,0.151143120213571,0,0.860423876981386,0,0,0,0,0.280888840263504,0.170430322578058,0,0.70667914902068,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0.258937883647172,0,0.173485326766136,0.608930956624282,0.691846491768175,0.452167921657868,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.161766849947409,1.98757366614354,0,0,0,1.46612694769419,0.510914110417183,2.03685711660064,1.79970819298022,1.01656181658452,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0,0.407357455401265,1.11966273549084,0,0.210441855886474,0.260240885925407,0.229902104433473,0,1.20563854268572,1.08858398642125,0.768682321709099,0.843315521037559,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0,0.411564272815887,0,1.40442637462647,1.28673953557358,2.27330799516474,0.414251545071004,0.938104239924385,0.36012412292203,0.473489471170421,1.18058539048442,0.154267112887378,0.465067889500816,0.804820204198858,0.350296027101508,0,0.492502392237286,0.405344047729279,0.292399974850665,0,0.402619256281115,0.630869845692382,0.308713837137853,0,0,0.639864751605702,1.16118335930219,0.515469845288373,0.201683524623343,0,0.190225626112559,0,0.164698954724011,1.00534083520108,0.795825888164603,0.58489226135736,0,1.29682829924817,0.398282546508734,0.379335801906163,0.685491075658373,0,0.814605311381257,0.193952487167626,0.420814919341911,0.252946148497029,0,0.784993639206874,0.370191491765402,0,0.83422552858047,1.37591296579242,0.674586337154561,0.608580364165509,1.20588579876208,0.763877555344259,1.72617682470486,2.43202840162553,3.56929837144506,1.43768206527355,1.86070473834252,0.312037673114561,0.252578877947112,0.358794827043824,0.964887042726734,0.923765950833023,0,0.162964976442026,1.18821560042632,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0.8858587585951,0.478364305972461,0.655453258862952,0.863424909329478,1.15719246865209,0,0,0,0.551873492609465,0.321101179975584,0.35163505977661,0.163934945376675,0.757412781613119,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0.35613120733451,0.651547837414304,0.329940245945071,0,0.728341908464944,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0.712994756769443,0.632073515871632,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.493647061806363,0,0,0,0,0,1.13025098687134,0.422190474497091,0.954978752025092,0.984845398470368,0,0,2.22132145037209,0,0.740778109478847,8.85331747922048,3.55404992074665,3.66045077130436,0.849892149969277,2.23922323717853,1.10559979043539,0,0.316335993581135,0.406638934253697,1.40406943068342,0.627264888043406,0.436725127492355,1.07891477107857,1.23980183588004,0.523511883968059,0.388844919875379,0,0,0.598066184175915,0.165458490457098,0.194451188344048,1.03327858782185,0.337912250981556,0.469428954583016,0.781226309063701,0.524296722128554,0.724752362478018,0.576060012515731,1.58005560314089,1.21635129174099,0.924398614483445,1.55904987573354,1.25318686967237,0.39736270956253,3.4856680360791,3.54454865218985,2.72609414859999,3.04827226619999,3.02478555410522,1.75424185331554,3.55983814069219,4.20756847853648,0,0.221985953374065,0.358855426437903,0,0.19318959403219,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0.972426868273176,0,0.183843508450014,0.222246727801615,1.03017528619447,0.320919209591815,0,0.50695859978048,0.377252682772152,0.280924522409647,0.320125762024346,0.0574354689556133,0,0,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.726732083161643,0.376437521661322,0.761531471025089,0.365855945745545,0,0.679020569229309,0,0.474540072496697,0.197008964751127,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p@chr1:183750776..183750778,-}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=411
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr1:183750776..183750778,-
|id=chr1:183750776..183750778,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000988,1.17e-08,32;CL:0002032,1.17e-08,32;CL:0000037,1.17e-08,32;CL:0000837,1.17e-08,32;CL:0000049,4.23e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005057!1.84e-08!51;UBERON:0002405!3.71e-08!70;UBERON:0004177!5.93e-08!29;UBERON:0002390!1.62e-07!45;UBERON:0003061!1.62e-07!45;UBERON:0002193!5.74e-07!48;UBERON:0000926!9.58e-07!193;UBERON:0004120!9.58e-07!193;UBERON:0006603!9.58e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.16e-17,45;UBERON:0003061,6.16e-17,45;UBERON:0002193,2.14e-15,48;UBERON:0002405,2.14e-15,48;UBERON:0004177,1.71e-13,29;UBERON:0005057,1.71e-13,29;UBERON:0000077,2.71e-10,35;UBERON:0002370,4.03e-10,23;UBERON:0000974,4.03e-10,23;UBERON:0004807,4.03e-10,23;UBERON:0005058,4.03e-10,23;UBERON:0003351,4.03e-10,23;UBERON:0009113,4.03e-10,23;UBERON:0003295,4.03e-10,23;UBERON:0009722,4.03e-10,23;UBERON:0005562,4.03e-10,23;UBERON:0007690,4.03e-10,23;UBERON:0006562,1.53e-09,24;UBERON:0003408,1.53e-09,24;UBERON:0001557,1.53e-09,24;UBERON:0001042,1.53e-09,24;UBERON:0008814,1.53e-09,24;UBERON:0009145,1.53e-09,24;UBERON:0001041,3.88e-09,80;UBERON:0000072,4.48e-08,27;UBERON:0000490,2.14e-07,66;UBERON:0003081,2.96e-07,87;UBERON:0003929,6.79e-07,55;UBERON:0007811,7.20e-07,36
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,1.29123323441576,2.25261955442667,0.936258105287974,0.171217968225505,0.239316476986009,0.856003649656029,1.57356724354195,3.66420737997229,2.02475267389826,3.49780939064073,0.946386496074713,1.37114433605739,1.27316895539409,0.340173160604279,1.39007331681239,1.04479915655574,0.47997726838022,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,6.27797446105362,4.6880120671428,6.80580867165938,13.5293242247133,6.83045484958446,5.82612423637384,0.503587271902309,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0.838913030288682,0.725362142011344,1.00828139742739,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,0,0.220868540951614,0.367472397644862,0.287536413054709,0,0,0,0,0.131886287730194,0.182975287204819,0,0.558365998002762,0,0.15279824777681,0,0,0.372798891650601,0.151452386666368,0.151143120213571,0,0.860423876981386,0,0,0,0,0.280888840263504,0.170430322578058,0,0.70667914902068,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0.258937883647172,0,0.173485326766136,0.608930956624282,0.691846491768175,0.452167921657868,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.161766849947409,1.98757366614354,0,0,0,1.46612694769419,0.510914110417183,2.03685711660064,1.79970819298022,1.01656181658452,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0,0.407357455401265,1.11966273549084,0,0.210441855886474,0.260240885925407,0.229902104433473,0,1.20563854268572,1.08858398642125,0.768682321709099,0.843315521037559,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0,0.411564272815887,0,1.40442637462647,1.28673953557358,2.27330799516474,0.414251545071004,0.938104239924385,0.36012412292203,0.473489471170421,1.18058539048442,0.154267112887378,0.465067889500816,0.804820204198858,0.350296027101508,0,0.492502392237286,0.405344047729279,0.292399974850665,0,0.402619256281115,0.630869845692382,0.308713837137853,0,0,0.639864751605702,1.16118335930219,0.515469845288373,0.201683524623343,0,0.190225626112559,0,0.164698954724011,1.00534083520108,0.795825888164603,0.58489226135736,0,1.29682829924817,0.398282546508734,0.379335801906163,0.685491075658373,0,0.814605311381257,0.193952487167626,0.420814919341911,0.252946148497029,0,0.784993639206874,0.370191491765402,0,0.83422552858047,1.37591296579242,0.674586337154561,0.608580364165509,1.20588579876208,0.763877555344259,1.72617682470486,2.43202840162553,3.56929837144506,1.43768206527355,1.86070473834252,0.312037673114561,0.252578877947112,0.358794827043824,0.964887042726734,0.923765950833023,0,0.162964976442026,1.18821560042632,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0.8858587585951,0.478364305972461,0.655453258862952,0.863424909329478,1.15719246865209,0,0,0,0.551873492609465,0.321101179975584,0.35163505977661,0.163934945376675,0.757412781613119,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0.35613120733451,0.651547837414304,0.329940245945071,0,0.728341908464944,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0.712994756769443,0.632073515871632,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.493647061806363,0,0,0,0,0,1.13025098687134,0.422190474497091,0.954978752025092,0.984845398470368,0,0,2.22132145037209,0,0.740778109478847,8.85331747922048,3.55404992074665,3.66045077130436,0.849892149969277,2.23922323717853,1.10559979043539,0,0.316335993581135,0.406638934253697,1.40406943068342,0.627264888043406,0.436725127492355,1.07891477107857,1.23980183588004,0.523511883968059,0.388844919875379,0,0,0.598066184175915,0.165458490457098,0.194451188344048,1.03327858782185,0.337912250981556,0.469428954583016,0.781226309063701,0.524296722128554,0.724752362478018,0.576060012515731,1.58005560314089,1.21635129174099,0.924398614483445,1.55904987573354,1.25318686967237,0.39736270956253,3.4856680360791,3.54454865218985,2.72609414859999,3.04827226619999,3.02478555410522,1.75424185331554,3.55983814069219,4.20756847853648,0,0.221985953374065,0.358855426437903,0,0.19318959403219,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0.972426868273176,0,0.183843508450014,0.222246727801615,1.03017528619447,0.320919209591815,0,0.50695859978048,0.377252682772152,0.280924522409647,0.320125762024346,0.0574354689556133,0,0,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.726732083161643,0.376437521661322,0.761531471025089,0.365855945745545,0,0.679020569229309,0,0.474540072496697,0.197008964751127,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p@chr1:183750776..183750778,-
}}

Revision as of 19:57, 13 September 2013

Short description:p@chr1:183750776..183750778, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr1:183750776..183750778, -
Coexpression cluster:MCL_coexpression_mm9:411
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr1:183750776..183750778-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G913.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D18.85
spleen, neonate N20.CNhs11112.824-19H13.55
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C42.73
thymus, neonate N07.CNhs11211.713-19D33.05
thymus, neonate N10.CNhs11194.748-24E43.02
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G73.56
thymus, neonate N30.CNhs11132.1393-42G24.21
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hematopoietic system6.16e-1745
blood island6.16e-1745
hemolymphoid system2.14e-1548
immune system2.14e-1548
hemopoietic organ1.71e-1329
immune organ1.71e-1329
mixed endoderm/mesoderm-derived structure2.71e-1035
thymus4.03e-1023
neck4.03e-1023
respiratory system epithelium4.03e-1023
hemolymphoid system gland4.03e-1023
pharyngeal epithelium4.03e-1023
thymic region4.03e-1023
pharyngeal gland4.03e-1023
entire pharyngeal arch endoderm4.03e-1023
thymus primordium4.03e-1023
early pharyngeal endoderm4.03e-1023
pharynx1.53e-0924
gland of gut1.53e-0924
upper respiratory tract1.53e-0924
chordate pharynx1.53e-0924
pharyngeal arch system1.53e-0924
pharyngeal region of foregut1.53e-0924
foregut3.88e-0980
segment of respiratory tract4.48e-0827
unilaminar epithelium2.14e-0766
lateral plate mesoderm2.96e-0787
gut epithelium6.79e-0755
craniocervical region7.20e-0736







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:183750776..183750778,-&oldid=2968796"