FFCP PHASE1:Mm9::chr1:34754390..34754396,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=25|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:34754390..34754396,+|id=chr1:34754390..34754396,+|ontology_enrichment_celltype=CL:0002453!1.99e-13!8;CL:0002319!1.16e-10!43;CL:0000333!1.31e-10!10;CL:0000095!1.31e-10!10;CL:0000243!1.31e-10!10;CL:0000123!1.31e-10!10;CL:0000125!1.31e-10!10;CL:0000030!1.31e-10!10;CL:0000339!1.31e-10!10;CL:0000221!2.35e-10!44;CL:0000133!2.35e-10!44;CL:0002612!2.89e-09!3;CL:0000055!9.13e-09!50;CL:0000128!3.26e-08!6;CL:0000126!3.26e-08!6;CL:0000127!3.26e-08!6;CL:0000864!1.87e-07!2;CL:0000878!1.87e-07!2;CL:0000129!1.87e-07!2;CL:0002604!6.94e-07!2;CL:0002605!6.94e-07!2;CL:0000117!7.32e-07!23;CL:0000337!7.32e-07!23|ontology_enrichment_celltype_v019_2=CL:0000878,1.80e-25,2;CL:0000129,1.80e-25,2;CL:0002453,1.61e-14,8;CL:0002194,2.76e-13,4;CL:0000766,2.76e-13,4;CL:0000234,2.76e-13,4;CL:0000576,2.76e-13,4;CL:0000235,2.76e-13,4;CL:0000864,2.76e-13,4;CL:0002009,2.76e-13,4;CL:0000040,2.76e-13,4;CL:0000559,2.76e-13,4;CL:0000333,9.13e-12,10;CL:0000095,9.13e-12,10;CL:0000243,9.13e-12,10;CL:0000123,9.13e-12,10;CL:0000125,9.13e-12,10;CL:0000030,9.13e-12,10;CL:0000339,9.13e-12,10;CL:0000473,5.24e-08,7;CL:0000557,5.24e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003076!5.75e-18!12;UBERON:0003057!5.75e-18!12;UBERON:0002240!5.10e-17!6;UBERON:0005174!5.10e-17!6;UBERON:0001137!5.10e-17!6;UBERON:0004121!1.14e-14!102;UBERON:0000924!1.14e-14!102;UBERON:0006601!1.14e-14!102;UBERON:0001948!2.68e-14!5;UBERON:0002315!2.68e-14!5;UBERON:0001017!8.13e-12!73;UBERON:0005743!8.13e-12!73;UBERON:0000073!2.18e-11!75;UBERON:0001016!2.18e-11!75;UBERON:0000014!6.86e-11!5;UBERON:0001003!6.86e-11!5;UBERON:0002097!6.86e-11!5;UBERON:0002199!6.86e-11!5;UBERON:0007029!6.86e-11!5;UBERON:0007376!6.86e-11!5;UBERON:0002416!6.86e-11!5;UBERON:0007383!6.86e-11!5;UBERON:0002257!2.89e-09!3;UBERON:0001049!5.60e-08!52;UBERON:0005068!5.60e-08!52;UBERON:0006241!5.60e-08!52;UBERON:0007135!5.60e-08!52;UBERON:0002298!8.37e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.16e-40,5;UBERON:0001003,1.16e-40,5;UBERON:0002097,1.16e-40,5;UBERON:0002199,1.16e-40,5;UBERON:0007029,1.16e-40,5;UBERON:0007376,1.16e-40,5;UBERON:0002416,1.16e-40,5;UBERON:0007383,1.16e-40,5;UBERON:0003102,1.11e-09,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,2.30530983192933,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.46081959976873,0,0,0,0,0,0.763991238884051,0.589257170947335,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10079135883476,0,1.99032652262914,7.5204576721976,14.6085400773105,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0|short_description=p@chr1:34754390..34754396,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=25 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:34754390..34754396,+ | |||
|id=chr1:34754390..34754396,+ | |||
|ontology_enrichment_celltype=CL:0002453!1.99e-13!8;CL:0002319!1.16e-10!43;CL:0000333!1.31e-10!10;CL:0000095!1.31e-10!10;CL:0000243!1.31e-10!10;CL:0000123!1.31e-10!10;CL:0000125!1.31e-10!10;CL:0000030!1.31e-10!10;CL:0000339!1.31e-10!10;CL:0000221!2.35e-10!44;CL:0000133!2.35e-10!44;CL:0002612!2.89e-09!3;CL:0000055!9.13e-09!50;CL:0000128!3.26e-08!6;CL:0000126!3.26e-08!6;CL:0000127!3.26e-08!6;CL:0000864!1.87e-07!2;CL:0000878!1.87e-07!2;CL:0000129!1.87e-07!2;CL:0002604!6.94e-07!2;CL:0002605!6.94e-07!2;CL:0000117!7.32e-07!23;CL:0000337!7.32e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,1.80e-25,2;CL:0000129,1.80e-25,2;CL:0002453,1.61e-14,8;CL:0002194,2.76e-13,4;CL:0000766,2.76e-13,4;CL:0000234,2.76e-13,4;CL:0000576,2.76e-13,4;CL:0000235,2.76e-13,4;CL:0000864,2.76e-13,4;CL:0002009,2.76e-13,4;CL:0000040,2.76e-13,4;CL:0000559,2.76e-13,4;CL:0000333,9.13e-12,10;CL:0000095,9.13e-12,10;CL:0000243,9.13e-12,10;CL:0000123,9.13e-12,10;CL:0000125,9.13e-12,10;CL:0000030,9.13e-12,10;CL:0000339,9.13e-12,10;CL:0000473,5.24e-08,7;CL:0000557,5.24e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!5.75e-18!12;UBERON:0003057!5.75e-18!12;UBERON:0002240!5.10e-17!6;UBERON:0005174!5.10e-17!6;UBERON:0001137!5.10e-17!6;UBERON:0004121!1.14e-14!102;UBERON:0000924!1.14e-14!102;UBERON:0006601!1.14e-14!102;UBERON:0001948!2.68e-14!5;UBERON:0002315!2.68e-14!5;UBERON:0001017!8.13e-12!73;UBERON:0005743!8.13e-12!73;UBERON:0000073!2.18e-11!75;UBERON:0001016!2.18e-11!75;UBERON:0000014!6.86e-11!5;UBERON:0001003!6.86e-11!5;UBERON:0002097!6.86e-11!5;UBERON:0002199!6.86e-11!5;UBERON:0007029!6.86e-11!5;UBERON:0007376!6.86e-11!5;UBERON:0002416!6.86e-11!5;UBERON:0007383!6.86e-11!5;UBERON:0002257!2.89e-09!3;UBERON:0001049!5.60e-08!52;UBERON:0005068!5.60e-08!52;UBERON:0006241!5.60e-08!52;UBERON:0007135!5.60e-08!52;UBERON:0002298!8.37e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.16e-40,5;UBERON:0001003,1.16e-40,5;UBERON:0002097,1.16e-40,5;UBERON:0002199,1.16e-40,5;UBERON:0007029,1.16e-40,5;UBERON:0007376,1.16e-40,5;UBERON:0002416,1.16e-40,5;UBERON:0007383,1.16e-40,5;UBERON:0003102,1.11e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,2.30530983192933,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.46081959976873,0,0,0,0,0,0.763991238884051,0.589257170947335,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10079135883476,0,1.99032652262914,7.5204576721976,14.6085400773105,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0 | |||
|short_description=p@chr1:34754390..34754396,+ | |||
}} |
Revision as of 20:16, 13 September 2013
Short description: | p@chr1:34754390..34754396, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:34754390..34754396, + |
Coexpression cluster: | MCL_coexpression_mm9:25 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 1.80e-25 | 2 |
microglial cell | 1.80e-25 | 2 |
oligodendrocyte precursor cell | 1.61e-14 | 8 |
monopoietic cell | 2.76e-13 | 4 |
myeloid leukocyte | 2.76e-13 | 4 |
phagocyte | 2.76e-13 | 4 |
monocyte | 2.76e-13 | 4 |
macrophage | 2.76e-13 | 4 |
tissue-resident macrophage | 2.76e-13 | 4 |
macrophage dendritic cell progenitor | 2.76e-13 | 4 |
monoblast | 2.76e-13 | 4 |
promonocyte | 2.76e-13 | 4 |
migratory neural crest cell | 9.13e-12 | 10 |
neuron associated cell | 9.13e-12 | 10 |
glial cell (sensu Vertebrata) | 9.13e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 9.13e-12 | 10 |
glial cell | 9.13e-12 | 10 |
glioblast | 9.13e-12 | 10 |
glioblast (sensu Vertebrata) | 9.13e-12 | 10 |
defensive cell | 5.24e-08 | 7 |
granulocyte monocyte progenitor cell | 5.24e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.16e-40 | 5 |
skin epidermis | 1.16e-40 | 5 |
skin of body | 1.16e-40 | 5 |
integument | 1.16e-40 | 5 |
surface | 1.16e-40 | 5 |
outer epithelium | 1.16e-40 | 5 |
integumental system | 1.16e-40 | 5 |
enveloping layer of ectoderm | 1.16e-40 | 5 |
surface structure | 1.11e-09 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.