FFCP PHASE1:Hg19::chr6:46620522..46620560,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51302|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17449|TSSclassifier=S|UniProt=Q9NYL5|association_with_transcript=0bp_to_ENST00000275016,NM_016593,uc003oyf.1,uc010jzd.1,uc011dwa.1_5end|description=CAGE_peak_2_at_CYP39A1_5end|id=chr6:46620522..46620560,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.88e-18!115;UBERON:0000481!2.16e-17!347;UBERON:0000153!4.08e-17!129;UBERON:0007811!4.08e-17!129;UBERON:0000033!8.28e-17!123;UBERON:0000062!1.07e-16!511;UBERON:0004119!1.40e-15!169;UBERON:0000925!1.40e-15!169;UBERON:0006595!1.40e-15!169;UBERON:0001007!2.33e-15!155;UBERON:0001555!2.33e-15!155;UBERON:0007026!2.33e-15!155;UBERON:0003075!1.80e-14!86;UBERON:0007284!1.80e-14!86;UBERON:0004121!2.72e-14!169;UBERON:0000064!4.03e-14!219;UBERON:0000924!1.89e-13!173;UBERON:0006601!1.89e-13!173;UBERON:0002346!3.69e-13!90;UBERON:0000475!3.48e-12!365;UBERON:0003056!4.85e-12!61;UBERON:0000922!1.15e-11!612;UBERON:0004921!6.59e-11!129;UBERON:0004185!6.59e-11!129;UBERON:0000468!8.46e-11!659;UBERON:0005743!4.73e-10!86;UBERON:0001444!4.78e-10!48;UBERON:0002050!5.26e-10!605;UBERON:0005423!5.26e-10!605;UBERON:0001049!6.35e-10!57;UBERON:0005068!6.35e-10!57;UBERON:0006241!6.35e-10!57;UBERON:0007135!6.35e-10!57;UBERON:0000923!1.23e-09!604;UBERON:0005291!1.23e-09!604;UBERON:0006598!1.23e-09!604;UBERON:0002532!1.23e-09!604;UBERON:0000467!1.48e-09!625;UBERON:0000480!2.10e-09!626;UBERON:0001017!2.19e-09!82;UBERON:0000477!3.82e-09!286;UBERON:0000063!7.53e-09!97;UBERON:0000077!2.00e-08!130;UBERON:0002780!2.70e-08!41;UBERON:0001890!2.70e-08!41;UBERON:0006240!2.70e-08!41;UBERON:0002616!3.29e-08!59;UBERON:0000161!6.07e-08!35;UBERON:0001048!6.74e-08!168;UBERON:0000073!7.29e-08!94;UBERON:0001016!7.29e-08!94;UBERON:0003080!7.96e-08!42;UBERON:0000955!1.04e-07!69;UBERON:0006238!1.04e-07!69;UBERON:0000483!1.93e-07!309;UBERON:0000119!1.97e-07!312;UBERON:0001004!4.03e-07!72;UBERON:0000020!4.46e-07!23|ontology_enrichment_uberon_v019=UBERON:0000153;2.66e-07;54!UBERON:0000970;9.74e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.31e-13,114;UBERON:0001007,3.60e-10,145;UBERON:0001555,3.60e-10,145;UBERON:0007026,3.60e-10,145;UBERON:0001444,3.05e-09,49;UBERON:0004119,3.40e-09,160;UBERON:0000925,3.40e-09,160;UBERON:0006595,3.40e-09,160;UBERON:0000153,1.35e-08,62;UBERON:0007811,1.35e-08,62;UBERON:0010314,1.43e-08,132;UBERON:0011216,1.49e-08,223;UBERON:0003075,1.52e-08,82;UBERON:0007284,1.52e-08,82;UBERON:0000033,2.82e-08,56;UBERON:0002346,8.53e-08,86;UBERON:0003056,2.03e-07,61;UBERON:0004121,2.91e-07,171;UBERON:0000924,2.91e-07,171;UBERON:0006601,2.91e-07,171|phase1_expression=0.363356758541113,0,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0.246242116153576,0,0,1.43117993565528,0.684372125364421,0.627713197974014,0,0,0,0,0,0,0,0.30120591877825,0,8.05658886035137,7.81930778680818,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0.12786256184353,0,0,0.869079113764942,0,0,2.9305793320861,1.99556457716308,1.58102614247627,0.851363990735132,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,1.06729878806013,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,1.17160715916898,0.624320153660641,0,0.448346041655403,0.23486899728753,0,0.280901613404497,1.02077085627447,0.61417158655884,3.09977343527296,0,0.741800787835671,0,0,2.35670559535693,1.00094815897571,2.77064115484183,0,0,0,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,4.84938170456436,0,0,0,0.193260853163297,0.272746120590835,0,0.609868530647977,0.795178609928912,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0.464367928031979,0,0.591534000199219,0.505754070234305,0.241011029883482,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,5.07020139287323,0.982827216677626,2.36315962672562,0,0.122988438543114,0.857839051492628,0,0,0.502644862058154,1.20364978706088,0.325808305310325,1.03993478527958,0,2.89826012437692,1.6437217193015,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.806026704325635,0.871901815541886,0,0,0,0,0.144119953416961,0,0.825472625798197,0,1.17217447210047,0,1.02827492703324,0,0.571652865261156,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,1.71573592389777,0,0.823240336780769,0,1.77695974371273,0,0.301439377059586,0.871533458600294,0.6998109382743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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51302 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17449 | |||
|TSSclassifier=S | |||
|UniProt=Q9NYL5 | |||
|association_with_transcript=0bp_to_ENST00000275016,NM_016593,uc003oyf.1,uc010jzd.1,uc011dwa.1_5end | |||
|description=CAGE_peak_2_at_CYP39A1_5end | |||
|id=chr6:46620522..46620560,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-18!115;UBERON:0000481!2.16e-17!347;UBERON:0000153!4.08e-17!129;UBERON:0007811!4.08e-17!129;UBERON:0000033!8.28e-17!123;UBERON:0000062!1.07e-16!511;UBERON:0004119!1.40e-15!169;UBERON:0000925!1.40e-15!169;UBERON:0006595!1.40e-15!169;UBERON:0001007!2.33e-15!155;UBERON:0001555!2.33e-15!155;UBERON:0007026!2.33e-15!155;UBERON:0003075!1.80e-14!86;UBERON:0007284!1.80e-14!86;UBERON:0004121!2.72e-14!169;UBERON:0000064!4.03e-14!219;UBERON:0000924!1.89e-13!173;UBERON:0006601!1.89e-13!173;UBERON:0002346!3.69e-13!90;UBERON:0000475!3.48e-12!365;UBERON:0003056!4.85e-12!61;UBERON:0000922!1.15e-11!612;UBERON:0004921!6.59e-11!129;UBERON:0004185!6.59e-11!129;UBERON:0000468!8.46e-11!659;UBERON:0005743!4.73e-10!86;UBERON:0001444!4.78e-10!48;UBERON:0002050!5.26e-10!605;UBERON:0005423!5.26e-10!605;UBERON:0001049!6.35e-10!57;UBERON:0005068!6.35e-10!57;UBERON:0006241!6.35e-10!57;UBERON:0007135!6.35e-10!57;UBERON:0000923!1.23e-09!604;UBERON:0005291!1.23e-09!604;UBERON:0006598!1.23e-09!604;UBERON:0002532!1.23e-09!604;UBERON:0000467!1.48e-09!625;UBERON:0000480!2.10e-09!626;UBERON:0001017!2.19e-09!82;UBERON:0000477!3.82e-09!286;UBERON:0000063!7.53e-09!97;UBERON:0000077!2.00e-08!130;UBERON:0002780!2.70e-08!41;UBERON:0001890!2.70e-08!41;UBERON:0006240!2.70e-08!41;UBERON:0002616!3.29e-08!59;UBERON:0000161!6.07e-08!35;UBERON:0001048!6.74e-08!168;UBERON:0000073!7.29e-08!94;UBERON:0001016!7.29e-08!94;UBERON:0003080!7.96e-08!42;UBERON:0000955!1.04e-07!69;UBERON:0006238!1.04e-07!69;UBERON:0000483!1.93e-07!309;UBERON:0000119!1.97e-07!312;UBERON:0001004!4.03e-07!72;UBERON:0000020!4.46e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0000153;2.66e-07;54!UBERON:0000970;9.74e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.31e-13,114;UBERON:0001007,3.60e-10,145;UBERON:0001555,3.60e-10,145;UBERON:0007026,3.60e-10,145;UBERON:0001444,3.05e-09,49;UBERON:0004119,3.40e-09,160;UBERON:0000925,3.40e-09,160;UBERON:0006595,3.40e-09,160;UBERON:0000153,1.35e-08,62;UBERON:0007811,1.35e-08,62;UBERON:0010314,1.43e-08,132;UBERON:0011216,1.49e-08,223;UBERON:0003075,1.52e-08,82;UBERON:0007284,1.52e-08,82;UBERON:0000033,2.82e-08,56;UBERON:0002346,8.53e-08,86;UBERON:0003056,2.03e-07,61;UBERON:0004121,2.91e-07,171;UBERON:0000924,2.91e-07,171;UBERON:0006601,2.91e-07,171 | |||
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| |||
|short_description=p2@CYP39A1 | |||
}} |
Revision as of 21:16, 13 September 2013
Short description: | p2@CYP39A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CYP39A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000275016, NM_016593, uc003oyf.1, uc010jzd.1, uc011dwa.1_5end |
EntrezGene: | CYP39A1 |
HGNC: | 17449 |
UniProt: | Q9NYL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.31e-13 | 114 |
digestive system | 3.60e-10 | 145 |
digestive tract | 3.60e-10 | 145 |
primitive gut | 3.60e-10 | 145 |
subdivision of head | 3.05e-09 | 49 |
endoderm-derived structure | 3.40e-09 | 160 |
endoderm | 3.40e-09 | 160 |
presumptive endoderm | 3.40e-09 | 160 |
anterior region of body | 1.35e-08 | 62 |
craniocervical region | 1.35e-08 | 62 |
structure with developmental contribution from neural crest | 1.43e-08 | 132 |
organ system subdivision | 1.49e-08 | 223 |
neural plate | 1.52e-08 | 82 |
presumptive neural plate | 1.52e-08 | 82 |
head | 2.82e-08 | 56 |
neurectoderm | 8.53e-08 | 86 |
pre-chordal neural plate | 2.03e-07 | 61 |
ectoderm-derived structure | 2.91e-07 | 171 |
ectoderm | 2.91e-07 | 171 |
presumptive ectoderm | 2.91e-07 | 171 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.