FFCP PHASE1:Mm9::chr2:158208771..158208772,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:158208771..158208772,+|id=chr2:158208771..158208772,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.20e-13!52;UBERON:0005068!1.20e-13!52;UBERON:0006241!1.20e-13!52;UBERON:0007135!1.20e-13!52;UBERON:0000955!7.30e-13!50;UBERON:0006238!7.30e-13!50;UBERON:0001017!1.84e-12!73;UBERON:0005743!1.84e-12!73;UBERON:0000073!5.29e-12!75;UBERON:0001016!5.29e-12!75;UBERON:0000033!5.80e-12!63;UBERON:0002616!1.89e-11!49;UBERON:0002346!2.92e-11!71;UBERON:0003075!2.92e-11!71;UBERON:0007284!2.92e-11!71;UBERON:0004121!1.48e-10!102;UBERON:0000924!1.48e-10!102;UBERON:0006601!1.48e-10!102;UBERON:0003076!4.38e-10!12;UBERON:0003057!4.38e-10!12;UBERON:0007811!1.32e-09!86;UBERON:0000153!2.15e-08!94;UBERON:0002298!1.15e-07!6;UBERON:0004733!1.71e-07!6;UBERON:0004732!1.71e-07!6;UBERON:0002028!1.71e-07!6;UBERON:0007277!1.71e-07!6;UBERON:0003056!4.84e-07!49;UBERON:0007023!8.66e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002259,5.07e-23,1;UBERON:0002314,5.07e-23,1;UBERON:0004061,5.07e-23,1;UBERON:0006777,5.07e-23,1;UBERON:0005882,5.07e-23,1;UBERON:0002021,2.31e-20,10;UBERON:0000411,2.31e-20,10;UBERON:0001950,2.31e-20,10;UBERON:0002619,2.19e-12,17;UBERON:0000956,3.37e-10,21;UBERON:0001869,3.37e-10,21;UBERON:0000203,3.37e-10,21;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0003528,1.28e-07,29;UBERON:0002791,1.28e-07,29;UBERON:0001893,1.28e-07,29;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54;UBERON:0002950,9.17e-07,4;UBERON:0001891,9.17e-07,4;UBERON:0009616,9.17e-07,4;UBERON:0010286,9.17e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0.15279824777681,0,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,1.64769703345305,0.457500602818626,0,0.521472960576829,0.511430914660661,0.83115217823824,0.811206315338788,0,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3748254587495,0,0,0,0.900642406448441,1.81256963593682,1.03552062350364,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr2:158208771..158208772,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:158208771..158208772,+ | |||
|id=chr2:158208771..158208772,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.20e-13!52;UBERON:0005068!1.20e-13!52;UBERON:0006241!1.20e-13!52;UBERON:0007135!1.20e-13!52;UBERON:0000955!7.30e-13!50;UBERON:0006238!7.30e-13!50;UBERON:0001017!1.84e-12!73;UBERON:0005743!1.84e-12!73;UBERON:0000073!5.29e-12!75;UBERON:0001016!5.29e-12!75;UBERON:0000033!5.80e-12!63;UBERON:0002616!1.89e-11!49;UBERON:0002346!2.92e-11!71;UBERON:0003075!2.92e-11!71;UBERON:0007284!2.92e-11!71;UBERON:0004121!1.48e-10!102;UBERON:0000924!1.48e-10!102;UBERON:0006601!1.48e-10!102;UBERON:0003076!4.38e-10!12;UBERON:0003057!4.38e-10!12;UBERON:0007811!1.32e-09!86;UBERON:0000153!2.15e-08!94;UBERON:0002298!1.15e-07!6;UBERON:0004733!1.71e-07!6;UBERON:0004732!1.71e-07!6;UBERON:0002028!1.71e-07!6;UBERON:0007277!1.71e-07!6;UBERON:0003056!4.84e-07!49;UBERON:0007023!8.66e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002259,5.07e-23,1;UBERON:0002314,5.07e-23,1;UBERON:0004061,5.07e-23,1;UBERON:0006777,5.07e-23,1;UBERON:0005882,5.07e-23,1;UBERON:0002021,2.31e-20,10;UBERON:0000411,2.31e-20,10;UBERON:0001950,2.31e-20,10;UBERON:0002619,2.19e-12,17;UBERON:0000956,3.37e-10,21;UBERON:0001869,3.37e-10,21;UBERON:0000203,3.37e-10,21;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0003528,1.28e-07,29;UBERON:0002791,1.28e-07,29;UBERON:0001893,1.28e-07,29;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54;UBERON:0002950,9.17e-07,4;UBERON:0001891,9.17e-07,4;UBERON:0009616,9.17e-07,4;UBERON:0010286,9.17e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0.15279824777681,0,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,1.64769703345305,0.457500602818626,0,0.521472960576829,0.511430914660661,0.83115217823824,0.811206315338788,0,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3748254587495,0,0,0,0.900642406448441,1.81256963593682,1.03552062350364,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr2:158208771..158208772,+ | |||
}} |
Revision as of 22:41, 13 September 2013
Short description: | p@chr2:158208771..158208772, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:158208771..158208772, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpora quadrigemina | 5.07e-23 | 1 |
midbrain tectum | 5.07e-23 | 1 |
neural tube mantle layer | 5.07e-23 | 1 |
tectal plate | 5.07e-23 | 1 |
neural tube alar plate | 5.07e-23 | 1 |
occipital lobe | 2.31e-20 | 10 |
visual cortex | 2.31e-20 | 10 |
neocortex | 2.31e-20 | 10 |
regional part of cerebral cortex | 2.19e-12 | 17 |
cerebral cortex | 3.37e-10 | 21 |
cerebral hemisphere | 3.37e-10 | 21 |
pallium | 3.37e-10 | 21 |
anterior neural tube | 1.55e-09 | 40 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
pre-chordal neural plate | 6.29e-08 | 49 |
brain grey matter | 1.28e-07 | 29 |
regional part of telencephalon | 1.28e-07 | 29 |
telencephalon | 1.28e-07 | 29 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |
regional part of midbrain | 9.17e-07 | 4 |
midbrain | 9.17e-07 | 4 |
presumptive midbrain | 9.17e-07 | 4 |
midbrain neural tube | 9.17e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.