FFCP PHASE1:Mm9::chr2:28980859..28980904,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=269254|HGNC=|MCL_coexpression_id=0|UniProt=A2AKX3|association_with_transcript=347bp_to_ENSMUST00000061578,NM_198033,uc008izl.1,uc008izm.1_5end|description=CAGE_peak_4_at_Setx_5end|id=chr2:28980859..28980904,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!5.83e-11!94;UBERON:0007811!8.56e-10!86;UBERON:0002346!3.60e-09!71;UBERON:0003075!3.60e-09!71;UBERON:0007284!3.60e-09!71;UBERON:0001017!4.79e-09!73;UBERON:0005743!4.79e-09!73;UBERON:0000073!1.75e-08!75;UBERON:0001016!1.75e-08!75;UBERON:0000033!6.54e-08!63;UBERON:0003056!1.61e-07!49;UBERON:0004121!3.20e-07!102;UBERON:0000924!3.20e-07!102;UBERON:0006601!3.20e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.82e-10,64;UBERON:0003075,2.82e-10,64;UBERON:0007284,2.82e-10,64;UBERON:0001017,1.61e-09,73;UBERON:0001016,9.81e-09,75;UBERON:0004121,2.84e-08,95;UBERON:0000924,2.84e-08,95;UBERON:0006601,2.84e-08,95;UBERON:0010371,8.60e-08,73;UBERON:0010314,9.29e-08,92;UBERON:0003056,2.28e-07,49;UBERON:0000073,7.91e-07,54|phase1_expression=1.44133962394315,0.697950815278722,0.454999239389536,0,0,0.16787927191189,1.16806320297763,0.387369970324729,1.40788722151667,2.10658073689794,0.513653904676515,0.478632953972018,0.684802919724823,0.699363219351979,0.666219523631325,1.01237633694913,0,0.473193248037357,0,0,25.6830736256231,2.38298282882125,1.56719873483361,0,0.22940928106717,0.57423196411502,0,1.29282739611533,0.190023419456374,0.252030129759931,0,0,1.23012957516914,0,0.866554859253824,0.664938581433969,1.83752420636132,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,0.251793635951155,0.202753862439029,0.550640256485045,0.782391344348039,0,0,0.58328969722285,0.419959264876088,0,0.503347818173209,2.17608642603403,0.672187598284928,1.02903774414379,0.286533439938757,1.03134418455488,1.82084814773638,1.5869729378161,1.90149421051854,0.677689064138264,0,0.449949858640699,0,0,0,0.384218305321555,1.14058573539325,0.270011876663381,0.630974884054146,1.99955689082663,1.32521124570968,0.734944795289724,0.862609239164127,0.919218786610021,1.10115880999389,2.29837208553338,2.61131106535614,1.05509030184155,1.00636407962651,2.08365348222704,1.3959149950069,1.68828783009504,1.83357897332172,2.94628585473668,2.98980529678116,1.4911955666024,0.37863096666592,0.831287161174641,1.15945795480671,0,0,0,0,0,2.66844398250329,0.340860645156116,0.259786004602869,0.35333957451034,1.83096445709685,1.28326477414318,0,0,1.08245520505607,0.506719730950197,0.505524445014783,2.8545969929765,1.29468941823586,0.593768556259299,2.4287945747259,0.608930956624282,0.461230994512117,1.50722640552623,1.41106448562846,0.125666591329675,0.494389935468748,0.289198713839823,0,0.647067399789637,0.220841518460394,1.45462575940567,1.86391761218122,1.46390398505774,3.14170060220183,0.510914110417183,2.27648736561249,1.19980546198682,1.39777249780371,3.59497534571574,2.74500361691176,2.51308704225729,1.04294592115366,2.30143911597297,1.45451631191692,2.75810147215188,1.12023300235348,1.36847667671102,0,0.210441855886474,2.86264974517948,2.06911893990126,3.78130472591233,2.26057226753573,3.26575195926374,3.84341160854549,3.74806898238915,1.81092359517311,1.07783996466421,2.08016688184601,1.58356011747554,1.53437012699302,1.39023624612799,2.089512999133,1.64625709126355,1.19420560091096,0.702213187313235,1.28673953557358,0.852490498186778,1.86413195281952,2.11073453982987,1.98068267607116,1.18372367792605,2.36117078096885,1.3884040159864,1.62773761325285,1.3413670069981,0.934122738937356,0,0.985004784474571,0.0810688095458557,0.292399974850665,0.219550115291051,0.402619256281115,2.3131894342054,1.54356918568927,0,0.264450566663544,2.55945900642281,1.85789337488351,1.80414445850931,1.00841762311671,0.889512175379481,0.760902504450237,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0.58489226135736,0.898819408654221,0.648414149624083,0.597423819763102,1.13800740571849,2.97046132785295,0,1.83286195060783,0.969762435838129,1.33258057791605,1.07502113111237,1.18088118383682,0.627994911365499,0.246794327843601,0,0.667380422864376,1.17935397067922,0.899448449539415,0.405720242777006,0.72353147925725,0.50925170356284,0.863088412352432,0.648540907100142,0.823684239564244,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0,1.70542270593436,1.95557971730431,1.69745085775188,1.40814148973101,1.34005005953453,0.714130922658041,1.56106918286239,1.41871629695572,0.44292937929755,0.478364305972461,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.551873492609465,1.76605648986571,1.99259867206745,0.819674726883377,1.51482556322624,2.52406575533005,1.56175497718655,3.23135096599198,2.15071918157297,1.33679204449436,2.83076530788832,3.64329631507405,2.33804686329049,2.37172666767914,1.92792789853084,1.27746076687442,0.35613120733451,2.76907830901079,0.989820737835213,1.32745138339963,0.971122544619926,1.209294227859,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| ||
|EntrezGene=269254 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=A2AKX3 | |||
|association_with_transcript=347bp_to_ENSMUST00000061578,NM_198033,uc008izl.1,uc008izm.1_5end | |||
|description=CAGE_peak_4_at_Setx_5end | |||
|id=chr2:28980859..28980904,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!5.83e-11!94;UBERON:0007811!8.56e-10!86;UBERON:0002346!3.60e-09!71;UBERON:0003075!3.60e-09!71;UBERON:0007284!3.60e-09!71;UBERON:0001017!4.79e-09!73;UBERON:0005743!4.79e-09!73;UBERON:0000073!1.75e-08!75;UBERON:0001016!1.75e-08!75;UBERON:0000033!6.54e-08!63;UBERON:0003056!1.61e-07!49;UBERON:0004121!3.20e-07!102;UBERON:0000924!3.20e-07!102;UBERON:0006601!3.20e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.82e-10,64;UBERON:0003075,2.82e-10,64;UBERON:0007284,2.82e-10,64;UBERON:0001017,1.61e-09,73;UBERON:0001016,9.81e-09,75;UBERON:0004121,2.84e-08,95;UBERON:0000924,2.84e-08,95;UBERON:0006601,2.84e-08,95;UBERON:0010371,8.60e-08,73;UBERON:0010314,9.29e-08,92;UBERON:0003056,2.28e-07,49;UBERON:0000073,7.91e-07,54 | |||
|phase1_expression=1.44133962394315,0.697950815278722,0.454999239389536,0,0,0.16787927191189,1.16806320297763,0.387369970324729,1.40788722151667,2.10658073689794,0.513653904676515,0.478632953972018,0.684802919724823,0.699363219351979,0.666219523631325,1.01237633694913,0,0.473193248037357,0,0,25.6830736256231,2.38298282882125,1.56719873483361,0,0.22940928106717,0.57423196411502,0,1.29282739611533,0.190023419456374,0.252030129759931,0,0,1.23012957516914,0,0.866554859253824,0.664938581433969,1.83752420636132,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,0.251793635951155,0.202753862439029,0.550640256485045,0.782391344348039,0,0,0.58328969722285,0.419959264876088,0,0.503347818173209,2.17608642603403,0.672187598284928,1.02903774414379,0.286533439938757,1.03134418455488,1.82084814773638,1.5869729378161,1.90149421051854,0.677689064138264,0,0.449949858640699,0,0,0,0.384218305321555,1.14058573539325,0.270011876663381,0.630974884054146,1.99955689082663,1.32521124570968,0.734944795289724,0.862609239164127,0.919218786610021,1.10115880999389,2.29837208553338,2.61131106535614,1.05509030184155,1.00636407962651,2.08365348222704,1.3959149950069,1.68828783009504,1.83357897332172,2.94628585473668,2.98980529678116,1.4911955666024,0.37863096666592,0.831287161174641,1.15945795480671,0,0,0,0,0,2.66844398250329,0.340860645156116,0.259786004602869,0.35333957451034,1.83096445709685,1.28326477414318,0,0,1.08245520505607,0.506719730950197,0.505524445014783,2.8545969929765,1.29468941823586,0.593768556259299,2.4287945747259,0.608930956624282,0.461230994512117,1.50722640552623,1.41106448562846,0.125666591329675,0.494389935468748,0.289198713839823,0,0.647067399789637,0.220841518460394,1.45462575940567,1.86391761218122,1.46390398505774,3.14170060220183,0.510914110417183,2.27648736561249,1.19980546198682,1.39777249780371,3.59497534571574,2.74500361691176,2.51308704225729,1.04294592115366,2.30143911597297,1.45451631191692,2.75810147215188,1.12023300235348,1.36847667671102,0,0.210441855886474,2.86264974517948,2.06911893990126,3.78130472591233,2.26057226753573,3.26575195926374,3.84341160854549,3.74806898238915,1.81092359517311,1.07783996466421,2.08016688184601,1.58356011747554,1.53437012699302,1.39023624612799,2.089512999133,1.64625709126355,1.19420560091096,0.702213187313235,1.28673953557358,0.852490498186778,1.86413195281952,2.11073453982987,1.98068267607116,1.18372367792605,2.36117078096885,1.3884040159864,1.62773761325285,1.3413670069981,0.934122738937356,0,0.985004784474571,0.0810688095458557,0.292399974850665,0.219550115291051,0.402619256281115,2.3131894342054,1.54356918568927,0,0.264450566663544,2.55945900642281,1.85789337488351,1.80414445850931,1.00841762311671,0.889512175379481,0.760902504450237,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0.58489226135736,0.898819408654221,0.648414149624083,0.597423819763102,1.13800740571849,2.97046132785295,0,1.83286195060783,0.969762435838129,1.33258057791605,1.07502113111237,1.18088118383682,0.627994911365499,0.246794327843601,0,0.667380422864376,1.17935397067922,0.899448449539415,0.405720242777006,0.72353147925725,0.50925170356284,0.863088412352432,0.648540907100142,0.823684239564244,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0,1.70542270593436,1.95557971730431,1.69745085775188,1.40814148973101,1.34005005953453,0.714130922658041,1.56106918286239,1.41871629695572,0.44292937929755,0.478364305972461,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.551873492609465,1.76605648986571,1.99259867206745,0.819674726883377,1.51482556322624,2.52406575533005,1.56175497718655,3.23135096599198,2.15071918157297,1.33679204449436,2.83076530788832,3.64329631507405,2.33804686329049,2.37172666767914,1.92792789853084,1.27746076687442,0.35613120733451,2.76907830901079,0.989820737835213,1.32745138339963,0.971122544619926,1.209294227859,0.943025398779491,0.590603785761546,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,1.26414703174326,0,1.03135543248187,1.36175842301515,3.24109969256358,0.905510786479282,2.14337035031592,3.19212420556092,1.07021290561242,1.97458824722545,1.8267896946876,0.469343416127421,0.21183207086382,0.220528398054962,0.32977250588296,0.322928853391811,0.72375509913787,0.477489376012546,0,0,1.66882771809459,0.341741761595705,1.65109494370578,0.925972636848558,0.753473828018764,0.956859594047176,0.915112692826091,0.509935289981566,1.11961161858926,2.3493995546752,0,2.37251995185852,1.82987520414164,0.756037385752609,0.836353184057875,0.436725127492355,0.539457385539283,0.909188012978695,0.26175594198403,0.388844919875379,0,193.346677968677,2.0932316446157,1.65458490457098,1.75006069509643,1.80823752868824,2.36538575687089,2.11243029562357,3.3853140059427,3.56521771047417,70.0593950395418,78.6321917083973,1.26404448251271,1.41907650703115,2.36235201479103,2.46849563657811,4.11761400035207,2.98022032171897,2.16351809135944,2.21534290761866,2.22126189885925,2.43861781295999,1.20991422164209,1.16949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| |||
|short_description=p4@Setx | |||
}} | |||
Revision as of 23:38, 13 September 2013
| Short description: | p4@Setx |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Setx_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | 347bp_to_ENSMUST00000061578, NM_198033, uc008izl.1, uc008izm.1_5end |
| EntrezGene: | Setx |
| Link to Zenbu: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 2.82e-10 | 64 |
| neural plate | 2.82e-10 | 64 |
| presumptive neural plate | 2.82e-10 | 64 |
| central nervous system | 1.61e-09 | 73 |
| nervous system | 9.81e-09 | 75 |
| ectoderm-derived structure | 2.84e-08 | 95 |
| ectoderm | 2.84e-08 | 95 |
| presumptive ectoderm | 2.84e-08 | 95 |
| ecto-epithelium | 8.60e-08 | 73 |
| structure with developmental contribution from neural crest | 9.29e-08 | 92 |
| pre-chordal neural plate | 2.28e-07 | 49 |
| regional part of nervous system | 7.91e-07 | 54 |
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