FFCP PHASE1:Mm9::chr3:106593093..106593104,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=12508|HGNC=|MCL_coexpression_id=68|UniProt=Q61451,Q3TV80,Q3U0W1|association_with_transcript=-26bp_to_ENSMUST00000038845,NM_007651,uc008qwm.2_5end|description=CAGE_peak_7_at_Cd53_5end|id=chr3:106593093..106593104,-|ontology_enrichment_celltype=CL:0000988!2.89e-15!32;CL:0002032!2.89e-15!32;CL:0000037!2.89e-15!32;CL:0000566!2.89e-15!32;CL:0000837!2.89e-15!32;CL:0000838!3.39e-14!12;CL:0000791!4.92e-14!9;CL:0000789!4.92e-14!9;CL:0002420!4.92e-14!9;CL:0002419!4.92e-14!9;CL:0000790!4.92e-14!9;CL:0000084!3.51e-13!11;CL:0000827!3.51e-13!11;CL:0000542!7.68e-13!13;CL:0000051!7.68e-13!13;CL:0000624!1.03e-12!8;CL:0000738!1.08e-10!17;CL:0002087!1.08e-10!17;CL:0002031!5.18e-10!25;CL:0000893!5.54e-10!6;CL:0002489!5.54e-10!6;CL:0000898!5.54e-10!6;CL:0000809!5.54e-10!6;CL:0000810!5.54e-10!6;CL:0000895!5.54e-10!6;CL:0000808!5.54e-10!6;CL:0000894!5.54e-10!6;CL:0000806!5.54e-10!6;CL:0000807!5.54e-10!6;CL:0000805!5.54e-10!6;CL:0002425!5.54e-10!6;CL:0002436!5.54e-10!6;CL:0002427!5.54e-10!6;CL:0002428!5.54e-10!6;CL:0002429!5.54e-10!6;CL:0002433!5.54e-10!6;CL:0002431!5.54e-10!6;CL:0002432!5.54e-10!6;CL:0002320!9.47e-10!46;CL:0000134!9.47e-10!46;CL:0000219!8.14e-09!54|ontology_enrichment_celltype_v019_2=CL:0000791,1.99e-39,9;CL:0000789,1.99e-39,9;CL:0002420,1.99e-39,9;CL:0002419,1.99e-39,9;CL:0000790,1.99e-39,9;CL:0000624,2.15e-35,8;CL:0000084,4.93e-32,11;CL:0000827,4.93e-32,11;CL:0000838,2.94e-29,12;CL:0000893,4.45e-27,6;CL:0002489,4.45e-27,6;CL:0000898,4.45e-27,6;CL:0000809,4.45e-27,6;CL:0000810,4.45e-27,6;CL:0000895,4.45e-27,6;CL:0000808,4.45e-27,6;CL:0000894,4.45e-27,6;CL:0000806,4.45e-27,6;CL:0000807,4.45e-27,6;CL:0000805,4.45e-27,6;CL:0002425,4.45e-27,6;CL:0002436,4.45e-27,6;CL:0002427,4.45e-27,6;CL:0002428,4.45e-27,6;CL:0002429,4.45e-27,6;CL:0002433,4.45e-27,6;CL:0002431,4.45e-27,6;CL:0002432,4.45e-27,6;CL:0000542,6.55e-27,13;CL:0000051,6.55e-27,13;CL:0000988,7.97e-21,32;CL:0002032,7.97e-21,32;CL:0000037,7.97e-21,32;CL:0000837,7.97e-21,32;CL:0000738,2.85e-20,17;CL:0002087,2.85e-20,17;CL:0002031,2.46e-16,25;CL:0002320,8.05e-14,46;CL:0000134,8.05e-14,46;CL:0000034,1.51e-11,97;CL:0000219,1.92e-11,54;CL:0000723,3.75e-08,91;CL:0000048,3.75e-08,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.08e-21!48;UBERON:0002390!4.32e-20!45;UBERON:0003061!4.32e-20!45;UBERON:0004177!7.09e-18!29;UBERON:0002370!9.23e-17!23;UBERON:0000974!9.23e-17!23;UBERON:0004807!9.23e-17!23;UBERON:0005058!9.23e-17!23;UBERON:0003351!9.23e-17!23;UBERON:0009113!9.23e-17!23;UBERON:0003295!9.23e-17!23;UBERON:0009722!9.23e-17!23;UBERON:0005562!9.23e-17!23;UBERON:0007690!9.23e-17!23;UBERON:0006562!8.11e-16!24;UBERON:0003408!8.11e-16!24;UBERON:0001557!8.11e-16!24;UBERON:0001042!8.11e-16!24;UBERON:0008814!8.11e-16!24;UBERON:0009145!8.11e-16!24;UBERON:0000072!4.02e-15!27;UBERON:0003081!6.83e-14!88;UBERON:0002405!1.61e-13!70;UBERON:0000063!2.62e-10!35;UBERON:0002384!9.47e-10!46;UBERON:0005057!3.62e-09!51;UBERON:0000065!7.40e-09!41;UBERON:0001004!1.65e-08!42;UBERON:0000490!1.71e-08!66|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.05e-14,46;UBERON:0002370,8.95e-09,23;UBERON:0000974,8.95e-09,23;UBERON:0004807,8.95e-09,23;UBERON:0005058,8.95e-09,23;UBERON:0003351,8.95e-09,23;UBERON:0009113,8.95e-09,23;UBERON:0003295,8.95e-09,23;UBERON:0009722,8.95e-09,23;UBERON:0005562,8.95e-09,23;UBERON:0007690,8.95e-09,23;UBERON:0006562,2.25e-08,24;UBERON:0003408,2.25e-08,24;UBERON:0001557,2.25e-08,24;UBERON:0001042,2.25e-08,24;UBERON:0008814,2.25e-08,24;UBERON:0009145,2.25e-08,24;UBERON:0002193,1.87e-07,48;UBERON:0002405,1.87e-07,48;UBERON:0000072,2.38e-07,27;UBERON:0004177,8.75e-07,29;UBERON:0005057,8.75e-07,29|phase1_expression=0,0,0,0,0,0,0,6.45616617207881,32.6629835391867,44.0041309485348,111.634115283029,77.1396777484903,6.33442700745461,5.15780374272085,0,0,0,1.41957974411207,0.411343300817216,0.42438965179803,0,0,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,2.09409497589519,3.52938892818609,0.683045484958446,0.971020706062307,0.251793635951155,0.811015449756117,1.83546752161682,0,0,0,0,0,0,0.503347818173209,5.07753499407941,3.6970317905671,0.514518872071894,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1981512450592,0.599902730993408,2.03312363316904,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,0.568326998791185,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,3.0596117398894,2.6590775941495,3.86959926652387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.909445760844565,0.179026695667481,0,1.08175904567972,0.295379054349154,0.302899349844443,0.228620419965,0.302478555410522,0.584747284438515,0.192423683280659,0.467507608726276,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p7@Cd53}} | ||
|EntrezGene=12508 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|UniProt=Q61451,Q3TV80,Q3U0W1 | |||
|association_with_transcript=-26bp_to_ENSMUST00000038845,NM_007651,uc008qwm.2_5end | |||
|description=CAGE_peak_7_at_Cd53_5end | |||
|id=chr3:106593093..106593104,- | |||
|ontology_enrichment_celltype=CL:0000988!2.89e-15!32;CL:0002032!2.89e-15!32;CL:0000037!2.89e-15!32;CL:0000566!2.89e-15!32;CL:0000837!2.89e-15!32;CL:0000838!3.39e-14!12;CL:0000791!4.92e-14!9;CL:0000789!4.92e-14!9;CL:0002420!4.92e-14!9;CL:0002419!4.92e-14!9;CL:0000790!4.92e-14!9;CL:0000084!3.51e-13!11;CL:0000827!3.51e-13!11;CL:0000542!7.68e-13!13;CL:0000051!7.68e-13!13;CL:0000624!1.03e-12!8;CL:0000738!1.08e-10!17;CL:0002087!1.08e-10!17;CL:0002031!5.18e-10!25;CL:0000893!5.54e-10!6;CL:0002489!5.54e-10!6;CL:0000898!5.54e-10!6;CL:0000809!5.54e-10!6;CL:0000810!5.54e-10!6;CL:0000895!5.54e-10!6;CL:0000808!5.54e-10!6;CL:0000894!5.54e-10!6;CL:0000806!5.54e-10!6;CL:0000807!5.54e-10!6;CL:0000805!5.54e-10!6;CL:0002425!5.54e-10!6;CL:0002436!5.54e-10!6;CL:0002427!5.54e-10!6;CL:0002428!5.54e-10!6;CL:0002429!5.54e-10!6;CL:0002433!5.54e-10!6;CL:0002431!5.54e-10!6;CL:0002432!5.54e-10!6;CL:0002320!9.47e-10!46;CL:0000134!9.47e-10!46;CL:0000219!8.14e-09!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.99e-39,9;CL:0000789,1.99e-39,9;CL:0002420,1.99e-39,9;CL:0002419,1.99e-39,9;CL:0000790,1.99e-39,9;CL:0000624,2.15e-35,8;CL:0000084,4.93e-32,11;CL:0000827,4.93e-32,11;CL:0000838,2.94e-29,12;CL:0000893,4.45e-27,6;CL:0002489,4.45e-27,6;CL:0000898,4.45e-27,6;CL:0000809,4.45e-27,6;CL:0000810,4.45e-27,6;CL:0000895,4.45e-27,6;CL:0000808,4.45e-27,6;CL:0000894,4.45e-27,6;CL:0000806,4.45e-27,6;CL:0000807,4.45e-27,6;CL:0000805,4.45e-27,6;CL:0002425,4.45e-27,6;CL:0002436,4.45e-27,6;CL:0002427,4.45e-27,6;CL:0002428,4.45e-27,6;CL:0002429,4.45e-27,6;CL:0002433,4.45e-27,6;CL:0002431,4.45e-27,6;CL:0002432,4.45e-27,6;CL:0000542,6.55e-27,13;CL:0000051,6.55e-27,13;CL:0000988,7.97e-21,32;CL:0002032,7.97e-21,32;CL:0000037,7.97e-21,32;CL:0000837,7.97e-21,32;CL:0000738,2.85e-20,17;CL:0002087,2.85e-20,17;CL:0002031,2.46e-16,25;CL:0002320,8.05e-14,46;CL:0000134,8.05e-14,46;CL:0000034,1.51e-11,97;CL:0000219,1.92e-11,54;CL:0000723,3.75e-08,91;CL:0000048,3.75e-08,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.08e-21!48;UBERON:0002390!4.32e-20!45;UBERON:0003061!4.32e-20!45;UBERON:0004177!7.09e-18!29;UBERON:0002370!9.23e-17!23;UBERON:0000974!9.23e-17!23;UBERON:0004807!9.23e-17!23;UBERON:0005058!9.23e-17!23;UBERON:0003351!9.23e-17!23;UBERON:0009113!9.23e-17!23;UBERON:0003295!9.23e-17!23;UBERON:0009722!9.23e-17!23;UBERON:0005562!9.23e-17!23;UBERON:0007690!9.23e-17!23;UBERON:0006562!8.11e-16!24;UBERON:0003408!8.11e-16!24;UBERON:0001557!8.11e-16!24;UBERON:0001042!8.11e-16!24;UBERON:0008814!8.11e-16!24;UBERON:0009145!8.11e-16!24;UBERON:0000072!4.02e-15!27;UBERON:0003081!6.83e-14!88;UBERON:0002405!1.61e-13!70;UBERON:0000063!2.62e-10!35;UBERON:0002384!9.47e-10!46;UBERON:0005057!3.62e-09!51;UBERON:0000065!7.40e-09!41;UBERON:0001004!1.65e-08!42;UBERON:0000490!1.71e-08!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.05e-14,46;UBERON:0002370,8.95e-09,23;UBERON:0000974,8.95e-09,23;UBERON:0004807,8.95e-09,23;UBERON:0005058,8.95e-09,23;UBERON:0003351,8.95e-09,23;UBERON:0009113,8.95e-09,23;UBERON:0003295,8.95e-09,23;UBERON:0009722,8.95e-09,23;UBERON:0005562,8.95e-09,23;UBERON:0007690,8.95e-09,23;UBERON:0006562,2.25e-08,24;UBERON:0003408,2.25e-08,24;UBERON:0001557,2.25e-08,24;UBERON:0001042,2.25e-08,24;UBERON:0008814,2.25e-08,24;UBERON:0009145,2.25e-08,24;UBERON:0002193,1.87e-07,48;UBERON:0002405,1.87e-07,48;UBERON:0000072,2.38e-07,27;UBERON:0004177,8.75e-07,29;UBERON:0005057,8.75e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,6.45616617207881,32.6629835391867,44.0041309485348,111.634115283029,77.1396777484903,6.33442700745461,5.15780374272085,0,0,0,1.41957974411207,0.411343300817216,0.42438965179803,0,0,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,2.09409497589519,3.52938892818609,0.683045484958446,0.971020706062307,0.251793635951155,0.811015449756117,1.83546752161682,0,0,0,0,0,0,0.503347818173209,5.07753499407941,3.6970317905671,0.514518872071894,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1981512450592,0.599902730993408,2.03312363316904,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,0.568326998791185,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,3.0596117398894,2.6590775941495,3.86959926652387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.909445760844565,0.179026695667481,0,1.08175904567972,0.295379054349154,0.302899349844443,0.228620419965,0.302478555410522,0.584747284438515,0.192423683280659,0.467507608726276,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p7@Cd53 | |||
}} |
Revision as of 01:09, 14 September 2013
Short description: | p7@Cd53 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Cd53_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | -26bp_to_ENSMUST00000038845, NM_007651, uc008qwm.2_5end |
EntrezGene: | Cd53 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.05e-14 | 46 |
thymus | 8.95e-09 | 23 |
neck | 8.95e-09 | 23 |
respiratory system epithelium | 8.95e-09 | 23 |
hemolymphoid system gland | 8.95e-09 | 23 |
pharyngeal epithelium | 8.95e-09 | 23 |
thymic region | 8.95e-09 | 23 |
pharyngeal gland | 8.95e-09 | 23 |
entire pharyngeal arch endoderm | 8.95e-09 | 23 |
thymus primordium | 8.95e-09 | 23 |
early pharyngeal endoderm | 8.95e-09 | 23 |
pharynx | 2.25e-08 | 24 |
gland of gut | 2.25e-08 | 24 |
upper respiratory tract | 2.25e-08 | 24 |
chordate pharynx | 2.25e-08 | 24 |
pharyngeal arch system | 2.25e-08 | 24 |
pharyngeal region of foregut | 2.25e-08 | 24 |
hemolymphoid system | 1.87e-07 | 48 |
immune system | 1.87e-07 | 48 |
segment of respiratory tract | 2.38e-07 | 27 |
hemopoietic organ | 8.75e-07 | 29 |
immune organ | 8.75e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.