FFCP PHASE1:Mm9::chr4:155387843..155387856,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=190|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:155387843..155387856,-|id=chr4:155387843..155387856,-|ontology_enrichment_celltype=CL:0000791!3.78e-41!9;CL:0000789!3.78e-41!9;CL:0002420!3.78e-41!9;CL:0002419!3.78e-41!9;CL:0000790!3.78e-41!9;CL:0000624!6.31e-37!8;CL:0000084!1.88e-33!11;CL:0000827!1.88e-33!11;CL:0000838!1.45e-30!12;CL:0000542!4.03e-28!13;CL:0000051!4.03e-28!13;CL:0000893!7.45e-28!6;CL:0002489!7.45e-28!6;CL:0000898!7.45e-28!6;CL:0000809!7.45e-28!6;CL:0000810!7.45e-28!6;CL:0000895!7.45e-28!6;CL:0000808!7.45e-28!6;CL:0000894!7.45e-28!6;CL:0000806!7.45e-28!6;CL:0000807!7.45e-28!6;CL:0000805!7.45e-28!6;CL:0002425!7.45e-28!6;CL:0002436!7.45e-28!6;CL:0002427!7.45e-28!6;CL:0002428!7.45e-28!6;CL:0002429!7.45e-28!6;CL:0002433!7.45e-28!6;CL:0002431!7.45e-28!6;CL:0002432!7.45e-28!6;CL:0000738!3.27e-21!17;CL:0002087!3.27e-21!17;CL:0002031!5.20e-14!25;CL:0000988!1.18e-10!32;CL:0002032!1.18e-10!32;CL:0000037!1.18e-10!32;CL:0000566!1.18e-10!32;CL:0000837!1.18e-10!32;CL:0002320!5.28e-07!46;CL:0000134!5.28e-07!46;CL:0000063!7.99e-07!66|ontology_enrichment_celltype_v019_2=CL:0000624,3.71e-65,8;CL:0000791,5.24e-58,9;CL:0000789,5.24e-58,9;CL:0002420,5.24e-58,9;CL:0002419,5.24e-58,9;CL:0000790,5.24e-58,9;CL:0000084,1.34e-47,11;CL:0000827,1.34e-47,11;CL:0000838,1.08e-43,12;CL:0000542,2.18e-40,13;CL:0000051,2.18e-40,13;CL:0000893,7.39e-39,6;CL:0002489,7.39e-39,6;CL:0000898,7.39e-39,6;CL:0000809,7.39e-39,6;CL:0000810,7.39e-39,6;CL:0000895,7.39e-39,6;CL:0000808,7.39e-39,6;CL:0000894,7.39e-39,6;CL:0000806,7.39e-39,6;CL:0000807,7.39e-39,6;CL:0000805,7.39e-39,6;CL:0002425,7.39e-39,6;CL:0002436,7.39e-39,6;CL:0002427,7.39e-39,6;CL:0002428,7.39e-39,6;CL:0002429,7.39e-39,6;CL:0002433,7.39e-39,6;CL:0002431,7.39e-39,6;CL:0002432,7.39e-39,6;CL:0000738,4.81e-31,17;CL:0002087,4.81e-31,17;CL:0002031,2.66e-21,25;CL:0000988,9.31e-17,32;CL:0002032,9.31e-17,32;CL:0000037,9.31e-17,32;CL:0000837,9.31e-17,32;CL:0000815,4.83e-16,1;CL:0000792,4.83e-16,1;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000219,4.19e-10,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!7.03e-26!23;UBERON:0000974!7.03e-26!23;UBERON:0004807!7.03e-26!23;UBERON:0005058!7.03e-26!23;UBERON:0003351!7.03e-26!23;UBERON:0009113!7.03e-26!23;UBERON:0003295!7.03e-26!23;UBERON:0009722!7.03e-26!23;UBERON:0005562!7.03e-26!23;UBERON:0007690!7.03e-26!23;UBERON:0006562!1.00e-24!24;UBERON:0003408!1.00e-24!24;UBERON:0001557!1.00e-24!24;UBERON:0001042!1.00e-24!24;UBERON:0008814!1.00e-24!24;UBERON:0009145!1.00e-24!24;UBERON:0000072!8.98e-22!27;UBERON:0004177!3.83e-20!29;UBERON:0000063!2.28e-16!35;UBERON:0002193!7.49e-16!48;UBERON:0000065!1.08e-13!41;UBERON:0003929!1.27e-13!55;UBERON:0001004!2.53e-13!42;UBERON:0002390!2.63e-12!45;UBERON:0003061!2.63e-12!45;UBERON:0000490!5.72e-11!66;UBERON:0005057!1.24e-10!51;UBERON:0005911!2.16e-10!69;UBERON:0002405!3.76e-10!70;UBERON:0001962!1.06e-09!2;UBERON:0001961!1.06e-09!2;UBERON:0001744!1.06e-09!2;UBERON:0000064!5.95e-09!99;UBERON:0002368!9.57e-09!60;UBERON:0002530!6.37e-08!65;UBERON:0002384!5.28e-07!46;UBERON:0000949!5.81e-07!72;UBERON:0002465!9.60e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.56e-12,46;UBERON:0002370,1.24e-10,23;UBERON:0000974,1.24e-10,23;UBERON:0004807,1.24e-10,23;UBERON:0005058,1.24e-10,23;UBERON:0003351,1.24e-10,23;UBERON:0009113,1.24e-10,23;UBERON:0003295,1.24e-10,23;UBERON:0009722,1.24e-10,23;UBERON:0005562,1.24e-10,23;UBERON:0007690,1.24e-10,23;UBERON:0006562,3.27e-10,24;UBERON:0003408,3.27e-10,24;UBERON:0001557,3.27e-10,24;UBERON:0001042,3.27e-10,24;UBERON:0008814,3.27e-10,24;UBERON:0009145,3.27e-10,24;UBERON:0000072,3.90e-09,27;UBERON:0004177,1.53e-08,29;UBERON:0005057,1.53e-08,29;UBERON:0000077,3.71e-07,35;UBERON:0007811,5.70e-07,36|phase1_expression=0,0,0.454999239389536,0,0,0,0.233612640595526,11.3628524628587,5.63154888606667,16.6185813688615,2.39705155515707,3.66951931378547,0.684802919724823,0.437102012094987,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80289713609076,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:155387843..155387856,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=190 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:155387843..155387856,- | |||
|id=chr4:155387843..155387856,- | |||
|ontology_enrichment_celltype=CL:0000791!3.78e-41!9;CL:0000789!3.78e-41!9;CL:0002420!3.78e-41!9;CL:0002419!3.78e-41!9;CL:0000790!3.78e-41!9;CL:0000624!6.31e-37!8;CL:0000084!1.88e-33!11;CL:0000827!1.88e-33!11;CL:0000838!1.45e-30!12;CL:0000542!4.03e-28!13;CL:0000051!4.03e-28!13;CL:0000893!7.45e-28!6;CL:0002489!7.45e-28!6;CL:0000898!7.45e-28!6;CL:0000809!7.45e-28!6;CL:0000810!7.45e-28!6;CL:0000895!7.45e-28!6;CL:0000808!7.45e-28!6;CL:0000894!7.45e-28!6;CL:0000806!7.45e-28!6;CL:0000807!7.45e-28!6;CL:0000805!7.45e-28!6;CL:0002425!7.45e-28!6;CL:0002436!7.45e-28!6;CL:0002427!7.45e-28!6;CL:0002428!7.45e-28!6;CL:0002429!7.45e-28!6;CL:0002433!7.45e-28!6;CL:0002431!7.45e-28!6;CL:0002432!7.45e-28!6;CL:0000738!3.27e-21!17;CL:0002087!3.27e-21!17;CL:0002031!5.20e-14!25;CL:0000988!1.18e-10!32;CL:0002032!1.18e-10!32;CL:0000037!1.18e-10!32;CL:0000566!1.18e-10!32;CL:0000837!1.18e-10!32;CL:0002320!5.28e-07!46;CL:0000134!5.28e-07!46;CL:0000063!7.99e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.71e-65,8;CL:0000791,5.24e-58,9;CL:0000789,5.24e-58,9;CL:0002420,5.24e-58,9;CL:0002419,5.24e-58,9;CL:0000790,5.24e-58,9;CL:0000084,1.34e-47,11;CL:0000827,1.34e-47,11;CL:0000838,1.08e-43,12;CL:0000542,2.18e-40,13;CL:0000051,2.18e-40,13;CL:0000893,7.39e-39,6;CL:0002489,7.39e-39,6;CL:0000898,7.39e-39,6;CL:0000809,7.39e-39,6;CL:0000810,7.39e-39,6;CL:0000895,7.39e-39,6;CL:0000808,7.39e-39,6;CL:0000894,7.39e-39,6;CL:0000806,7.39e-39,6;CL:0000807,7.39e-39,6;CL:0000805,7.39e-39,6;CL:0002425,7.39e-39,6;CL:0002436,7.39e-39,6;CL:0002427,7.39e-39,6;CL:0002428,7.39e-39,6;CL:0002429,7.39e-39,6;CL:0002433,7.39e-39,6;CL:0002431,7.39e-39,6;CL:0002432,7.39e-39,6;CL:0000738,4.81e-31,17;CL:0002087,4.81e-31,17;CL:0002031,2.66e-21,25;CL:0000988,9.31e-17,32;CL:0002032,9.31e-17,32;CL:0000037,9.31e-17,32;CL:0000837,9.31e-17,32;CL:0000815,4.83e-16,1;CL:0000792,4.83e-16,1;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000219,4.19e-10,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!7.03e-26!23;UBERON:0000974!7.03e-26!23;UBERON:0004807!7.03e-26!23;UBERON:0005058!7.03e-26!23;UBERON:0003351!7.03e-26!23;UBERON:0009113!7.03e-26!23;UBERON:0003295!7.03e-26!23;UBERON:0009722!7.03e-26!23;UBERON:0005562!7.03e-26!23;UBERON:0007690!7.03e-26!23;UBERON:0006562!1.00e-24!24;UBERON:0003408!1.00e-24!24;UBERON:0001557!1.00e-24!24;UBERON:0001042!1.00e-24!24;UBERON:0008814!1.00e-24!24;UBERON:0009145!1.00e-24!24;UBERON:0000072!8.98e-22!27;UBERON:0004177!3.83e-20!29;UBERON:0000063!2.28e-16!35;UBERON:0002193!7.49e-16!48;UBERON:0000065!1.08e-13!41;UBERON:0003929!1.27e-13!55;UBERON:0001004!2.53e-13!42;UBERON:0002390!2.63e-12!45;UBERON:0003061!2.63e-12!45;UBERON:0000490!5.72e-11!66;UBERON:0005057!1.24e-10!51;UBERON:0005911!2.16e-10!69;UBERON:0002405!3.76e-10!70;UBERON:0001962!1.06e-09!2;UBERON:0001961!1.06e-09!2;UBERON:0001744!1.06e-09!2;UBERON:0000064!5.95e-09!99;UBERON:0002368!9.57e-09!60;UBERON:0002530!6.37e-08!65;UBERON:0002384!5.28e-07!46;UBERON:0000949!5.81e-07!72;UBERON:0002465!9.60e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.56e-12,46;UBERON:0002370,1.24e-10,23;UBERON:0000974,1.24e-10,23;UBERON:0004807,1.24e-10,23;UBERON:0005058,1.24e-10,23;UBERON:0003351,1.24e-10,23;UBERON:0009113,1.24e-10,23;UBERON:0003295,1.24e-10,23;UBERON:0009722,1.24e-10,23;UBERON:0005562,1.24e-10,23;UBERON:0007690,1.24e-10,23;UBERON:0006562,3.27e-10,24;UBERON:0003408,3.27e-10,24;UBERON:0001557,3.27e-10,24;UBERON:0001042,3.27e-10,24;UBERON:0008814,3.27e-10,24;UBERON:0009145,3.27e-10,24;UBERON:0000072,3.90e-09,27;UBERON:0004177,1.53e-08,29;UBERON:0005057,1.53e-08,29;UBERON:0000077,3.71e-07,35;UBERON:0007811,5.70e-07,36 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0.233612640595526,11.3628524628587,5.63154888606667,16.6185813688615,2.39705155515707,3.66951931378547,0.684802919724823,0.437102012094987,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80289713609076,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:155387843..155387856,- | |||
}} |
Revision as of 04:43, 14 September 2013
Short description: | p@chr4:155387843..155387856, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:155387843..155387856, - |
Coexpression cluster: | MCL_coexpression_mm9:190 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.56e-12 | 46 |
thymus | 1.24e-10 | 23 |
neck | 1.24e-10 | 23 |
respiratory system epithelium | 1.24e-10 | 23 |
hemolymphoid system gland | 1.24e-10 | 23 |
pharyngeal epithelium | 1.24e-10 | 23 |
thymic region | 1.24e-10 | 23 |
pharyngeal gland | 1.24e-10 | 23 |
entire pharyngeal arch endoderm | 1.24e-10 | 23 |
thymus primordium | 1.24e-10 | 23 |
early pharyngeal endoderm | 1.24e-10 | 23 |
pharynx | 3.27e-10 | 24 |
gland of gut | 3.27e-10 | 24 |
upper respiratory tract | 3.27e-10 | 24 |
chordate pharynx | 3.27e-10 | 24 |
pharyngeal arch system | 3.27e-10 | 24 |
pharyngeal region of foregut | 3.27e-10 | 24 |
segment of respiratory tract | 3.90e-09 | 27 |
hemopoietic organ | 1.53e-08 | 29 |
immune organ | 1.53e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 3.71e-07 | 35 |
craniocervical region | 5.70e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.