FFCP PHASE1:Mm9::chr4:32350855..32350868,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=190|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:32350855..32350868,+|id=chr4:32350855..32350868,+|ontology_enrichment_celltype=CL:0000791!3.10e-25!9;CL:0000789!3.10e-25!9;CL:0002420!3.10e-25!9;CL:0002419!3.10e-25!9;CL:0000790!3.10e-25!9;CL:0000624!9.61e-23!8;CL:0000838!1.09e-22!12;CL:0000542!8.84e-21!13;CL:0000051!8.84e-21!13;CL:0000084!2.58e-20!11;CL:0000827!2.58e-20!11;CL:0000893!2.09e-17!6;CL:0002489!2.09e-17!6;CL:0000898!2.09e-17!6;CL:0000809!2.09e-17!6;CL:0000810!2.09e-17!6;CL:0000895!2.09e-17!6;CL:0000808!2.09e-17!6;CL:0000894!2.09e-17!6;CL:0000806!2.09e-17!6;CL:0000807!2.09e-17!6;CL:0000805!2.09e-17!6;CL:0002425!2.09e-17!6;CL:0002436!2.09e-17!6;CL:0002427!2.09e-17!6;CL:0002428!2.09e-17!6;CL:0002429!2.09e-17!6;CL:0002433!2.09e-17!6;CL:0002431!2.09e-17!6;CL:0002432!2.09e-17!6;CL:0000738!2.19e-15!17;CL:0002087!2.19e-15!17;CL:0002031!8.72e-10!25;CL:0000988!3.38e-07!32;CL:0002032!3.38e-07!32;CL:0000037!3.38e-07!32;CL:0000566!3.38e-07!32;CL:0000837!3.38e-07!32|ontology_enrichment_celltype_v019_2=CL:0000624,2.53e-77,8;CL:0000791,9.41e-69,9;CL:0000789,9.41e-69,9;CL:0002420,9.41e-69,9;CL:0002419,9.41e-69,9;CL:0000790,9.41e-69,9;CL:0000893,4.23e-58,6;CL:0002489,4.23e-58,6;CL:0000898,4.23e-58,6;CL:0000809,4.23e-58,6;CL:0000810,4.23e-58,6;CL:0000895,4.23e-58,6;CL:0000808,4.23e-58,6;CL:0000894,4.23e-58,6;CL:0000806,4.23e-58,6;CL:0000807,4.23e-58,6;CL:0000805,4.23e-58,6;CL:0002425,4.23e-58,6;CL:0002436,4.23e-58,6;CL:0002427,4.23e-58,6;CL:0002428,4.23e-58,6;CL:0002429,4.23e-58,6;CL:0002433,4.23e-58,6;CL:0002431,4.23e-58,6;CL:0002432,4.23e-58,6;CL:0000084,2.79e-56,11;CL:0000827,2.79e-56,11;CL:0000838,1.34e-51,12;CL:0000542,1.22e-47,13;CL:0000051,1.22e-47,13;CL:0000738,1.91e-36,17;CL:0002087,1.91e-36,17;CL:0002031,8.91e-25,25;CL:0000988,2.45e-19,32;CL:0002032,2.45e-19,32;CL:0000037,2.45e-19,32;CL:0000837,2.45e-19,32;CL:0002320,2.12e-13,46;CL:0000134,2.12e-13,46;CL:0000815,1.83e-11,1;CL:0000792,1.83e-11,1;CL:0000219,2.23e-11,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.10e-14!23;UBERON:0000974!1.10e-14!23;UBERON:0004807!1.10e-14!23;UBERON:0005058!1.10e-14!23;UBERON:0003351!1.10e-14!23;UBERON:0009113!1.10e-14!23;UBERON:0003295!1.10e-14!23;UBERON:0009722!1.10e-14!23;UBERON:0005562!1.10e-14!23;UBERON:0007690!1.10e-14!23;UBERON:0006562!5.79e-14!24;UBERON:0003408!5.79e-14!24;UBERON:0001557!5.79e-14!24;UBERON:0001042!5.79e-14!24;UBERON:0008814!5.79e-14!24;UBERON:0009145!5.79e-14!24;UBERON:0004177!4.20e-13!29;UBERON:0000072!4.01e-12!27;UBERON:0000065!8.68e-10!41;UBERON:0001004!1.75e-09!42;UBERON:0000063!9.06e-09!35;UBERON:0005057!1.04e-08!51;UBERON:0002193!4.99e-08!48;UBERON:0002390!1.89e-07!45;UBERON:0003061!1.89e-07!45;UBERON:0002368!6.85e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.83e-15,23;UBERON:0000974,2.83e-15,23;UBERON:0004807,2.83e-15,23;UBERON:0005058,2.83e-15,23;UBERON:0003351,2.83e-15,23;UBERON:0009113,2.83e-15,23;UBERON:0003295,2.83e-15,23;UBERON:0009722,2.83e-15,23;UBERON:0005562,2.83e-15,23;UBERON:0007690,2.83e-15,23;UBERON:0006562,1.22e-14,24;UBERON:0003408,1.22e-14,24;UBERON:0001557,1.22e-14,24;UBERON:0001042,1.22e-14,24;UBERON:0008814,1.22e-14,24;UBERON:0009145,1.22e-14,24;UBERON:0002384,2.12e-13,46;UBERON:0000072,5.14e-13,27;UBERON:0004177,4.06e-12,29;UBERON:0005057,4.06e-12,29;UBERON:0000077,4.92e-10,35;UBERON:0007811,9.39e-10,36;UBERON:0000065,1.48e-08,41;UBERON:0003929,1.66e-08,55;UBERON:0001004,2.39e-08,42;UBERON:0000153,3.75e-08,43;UBERON:0002390,8.74e-08,45;UBERON:0003061,8.74e-08,45;UBERON:0002368,8.90e-08,60;UBERON:0002193,2.73e-07,48;UBERON:0002405,2.73e-07,48;UBERON:0002530,3.71e-07,65;UBERON:0000490,4.81e-07,66|phase1_expression=0,0,0,0,0,0,0,4.13194635013044,2.956563165185,3.97909694747389,1.54096171402954,1.27635454392538,2.56801094896809,2.53519167015092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.240390899039938,0,0.100966449948148,0,0,0.194915761479505,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:32350855..32350868,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=190 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:32350855..32350868,+ | |||
|id=chr4:32350855..32350868,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.10e-25!9;CL:0000789!3.10e-25!9;CL:0002420!3.10e-25!9;CL:0002419!3.10e-25!9;CL:0000790!3.10e-25!9;CL:0000624!9.61e-23!8;CL:0000838!1.09e-22!12;CL:0000542!8.84e-21!13;CL:0000051!8.84e-21!13;CL:0000084!2.58e-20!11;CL:0000827!2.58e-20!11;CL:0000893!2.09e-17!6;CL:0002489!2.09e-17!6;CL:0000898!2.09e-17!6;CL:0000809!2.09e-17!6;CL:0000810!2.09e-17!6;CL:0000895!2.09e-17!6;CL:0000808!2.09e-17!6;CL:0000894!2.09e-17!6;CL:0000806!2.09e-17!6;CL:0000807!2.09e-17!6;CL:0000805!2.09e-17!6;CL:0002425!2.09e-17!6;CL:0002436!2.09e-17!6;CL:0002427!2.09e-17!6;CL:0002428!2.09e-17!6;CL:0002429!2.09e-17!6;CL:0002433!2.09e-17!6;CL:0002431!2.09e-17!6;CL:0002432!2.09e-17!6;CL:0000738!2.19e-15!17;CL:0002087!2.19e-15!17;CL:0002031!8.72e-10!25;CL:0000988!3.38e-07!32;CL:0002032!3.38e-07!32;CL:0000037!3.38e-07!32;CL:0000566!3.38e-07!32;CL:0000837!3.38e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.53e-77,8;CL:0000791,9.41e-69,9;CL:0000789,9.41e-69,9;CL:0002420,9.41e-69,9;CL:0002419,9.41e-69,9;CL:0000790,9.41e-69,9;CL:0000893,4.23e-58,6;CL:0002489,4.23e-58,6;CL:0000898,4.23e-58,6;CL:0000809,4.23e-58,6;CL:0000810,4.23e-58,6;CL:0000895,4.23e-58,6;CL:0000808,4.23e-58,6;CL:0000894,4.23e-58,6;CL:0000806,4.23e-58,6;CL:0000807,4.23e-58,6;CL:0000805,4.23e-58,6;CL:0002425,4.23e-58,6;CL:0002436,4.23e-58,6;CL:0002427,4.23e-58,6;CL:0002428,4.23e-58,6;CL:0002429,4.23e-58,6;CL:0002433,4.23e-58,6;CL:0002431,4.23e-58,6;CL:0002432,4.23e-58,6;CL:0000084,2.79e-56,11;CL:0000827,2.79e-56,11;CL:0000838,1.34e-51,12;CL:0000542,1.22e-47,13;CL:0000051,1.22e-47,13;CL:0000738,1.91e-36,17;CL:0002087,1.91e-36,17;CL:0002031,8.91e-25,25;CL:0000988,2.45e-19,32;CL:0002032,2.45e-19,32;CL:0000037,2.45e-19,32;CL:0000837,2.45e-19,32;CL:0002320,2.12e-13,46;CL:0000134,2.12e-13,46;CL:0000815,1.83e-11,1;CL:0000792,1.83e-11,1;CL:0000219,2.23e-11,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.10e-14!23;UBERON:0000974!1.10e-14!23;UBERON:0004807!1.10e-14!23;UBERON:0005058!1.10e-14!23;UBERON:0003351!1.10e-14!23;UBERON:0009113!1.10e-14!23;UBERON:0003295!1.10e-14!23;UBERON:0009722!1.10e-14!23;UBERON:0005562!1.10e-14!23;UBERON:0007690!1.10e-14!23;UBERON:0006562!5.79e-14!24;UBERON:0003408!5.79e-14!24;UBERON:0001557!5.79e-14!24;UBERON:0001042!5.79e-14!24;UBERON:0008814!5.79e-14!24;UBERON:0009145!5.79e-14!24;UBERON:0004177!4.20e-13!29;UBERON:0000072!4.01e-12!27;UBERON:0000065!8.68e-10!41;UBERON:0001004!1.75e-09!42;UBERON:0000063!9.06e-09!35;UBERON:0005057!1.04e-08!51;UBERON:0002193!4.99e-08!48;UBERON:0002390!1.89e-07!45;UBERON:0003061!1.89e-07!45;UBERON:0002368!6.85e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.83e-15,23;UBERON:0000974,2.83e-15,23;UBERON:0004807,2.83e-15,23;UBERON:0005058,2.83e-15,23;UBERON:0003351,2.83e-15,23;UBERON:0009113,2.83e-15,23;UBERON:0003295,2.83e-15,23;UBERON:0009722,2.83e-15,23;UBERON:0005562,2.83e-15,23;UBERON:0007690,2.83e-15,23;UBERON:0006562,1.22e-14,24;UBERON:0003408,1.22e-14,24;UBERON:0001557,1.22e-14,24;UBERON:0001042,1.22e-14,24;UBERON:0008814,1.22e-14,24;UBERON:0009145,1.22e-14,24;UBERON:0002384,2.12e-13,46;UBERON:0000072,5.14e-13,27;UBERON:0004177,4.06e-12,29;UBERON:0005057,4.06e-12,29;UBERON:0000077,4.92e-10,35;UBERON:0007811,9.39e-10,36;UBERON:0000065,1.48e-08,41;UBERON:0003929,1.66e-08,55;UBERON:0001004,2.39e-08,42;UBERON:0000153,3.75e-08,43;UBERON:0002390,8.74e-08,45;UBERON:0003061,8.74e-08,45;UBERON:0002368,8.90e-08,60;UBERON:0002193,2.73e-07,48;UBERON:0002405,2.73e-07,48;UBERON:0002530,3.71e-07,65;UBERON:0000490,4.81e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,4.13194635013044,2.956563165185,3.97909694747389,1.54096171402954,1.27635454392538,2.56801094896809,2.53519167015092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.240390899039938,0,0.100966449948148,0,0,0.194915761479505,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:32350855..32350868,+ | |||
}} |
Revision as of 04:49, 14 September 2013
Short description: | p@chr4:32350855..32350868, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:32350855..32350868, + |
Coexpression cluster: | MCL_coexpression_mm9:190 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.83e-15 | 23 |
neck | 2.83e-15 | 23 |
respiratory system epithelium | 2.83e-15 | 23 |
hemolymphoid system gland | 2.83e-15 | 23 |
pharyngeal epithelium | 2.83e-15 | 23 |
thymic region | 2.83e-15 | 23 |
pharyngeal gland | 2.83e-15 | 23 |
entire pharyngeal arch endoderm | 2.83e-15 | 23 |
thymus primordium | 2.83e-15 | 23 |
early pharyngeal endoderm | 2.83e-15 | 23 |
pharynx | 1.22e-14 | 24 |
gland of gut | 1.22e-14 | 24 |
upper respiratory tract | 1.22e-14 | 24 |
chordate pharynx | 1.22e-14 | 24 |
pharyngeal arch system | 1.22e-14 | 24 |
pharyngeal region of foregut | 1.22e-14 | 24 |
connective tissue | 2.12e-13 | 46 |
segment of respiratory tract | 5.14e-13 | 27 |
hemopoietic organ | 4.06e-12 | 29 |
immune organ | 4.06e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 4.92e-10 | 35 |
craniocervical region | 9.39e-10 | 36 |
respiratory tract | 1.48e-08 | 41 |
gut epithelium | 1.66e-08 | 55 |
respiratory system | 2.39e-08 | 42 |
anterior region of body | 3.75e-08 | 43 |
hematopoietic system | 8.74e-08 | 45 |
blood island | 8.74e-08 | 45 |
endocrine gland | 8.90e-08 | 60 |
hemolymphoid system | 2.73e-07 | 48 |
immune system | 2.73e-07 | 48 |
gland | 3.71e-07 | 65 |
unilaminar epithelium | 4.81e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.