FFCP PHASE1:Hg19::chr8:63951987..63952009,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8836|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4248|TSSclassifier=W|UniProt=Q92820|association_with_transcript=-257bp_to_ENST00000260118_5end|coexpression_cluster_id=C0|description=CAGE_peak_3_at_GGH_5end|id=chr8:63951987..63952009,-|ontology_enrichment_celltype=CL:0002057!9.81e-30!42;CL:0000860!6.31e-28!45;CL:0000766!6.61e-22!76;CL:0000839!2.98e-20!70;CL:0000557!3.08e-20!71;CL:0000763!1.76e-19!112;CL:0000049!1.76e-19!112;CL:0002194!4.05e-17!63;CL:0000576!4.05e-17!63;CL:0000040!4.05e-17!63;CL:0000559!4.05e-17!63;CL:0002009!5.02e-17!65;CL:0000988!5.02e-17!182;CL:0000037!6.18e-17!172;CL:0000566!6.18e-17!172;CL:0002032!2.46e-16!165;CL:0000837!2.46e-16!165;CL:0000738!6.90e-16!140;CL:0002031!1.54e-14!124;CL:0002087!1.39e-13!119;CL:0000034!5.13e-08!444;CL:0000048!2.05e-07!430;CL:0000012!2.68e-07!682;CL:0000723!3.47e-07!436;CL:0000144!7.70e-07!625|ontology_enrichment_celltype_v019=CL:0000860;2.14e-77;33!CL:0002057;2.14e-77;33!CL:0000473;2.26e-53;39!CL:0000234;2.26e-53;39!CL:0000576;4.16e-47;48!CL:0000766;6.89e-33;69!CL:0000763;4.85e-17;100!CL:0002087;1.31e-15;104!CL:0000738;1.13e-11;136!CL:0002393;1.44e-11;6!CL:0002397;1.44e-11;6!CL:0000767;7.32e-09;3!CL:0000226;2.54e-08;3!CL:0000842;2.54e-08;3!CL:0000988;9.62e-08;177|ontology_enrichment_celltype_v019_2=CL:0000860,4.05e-88,42;CL:0002057,4.05e-88,42;CL:0000473,1.04e-75,48;CL:0000234,1.04e-75,48;CL:0000766,6.67e-67,72;CL:0000557,2.35e-65,67;CL:0000839,2.92e-60,66;CL:0002009,3.28e-59,61;CL:0002194,2.41e-58,59;CL:0000576,2.41e-58,59;CL:0000040,2.41e-58,59;CL:0000559,2.41e-58,59;CL:0000763,5.49e-49,108;CL:0000049,5.49e-49,108;CL:0000738,9.30e-48,136;CL:0002087,7.90e-41,115;CL:0000037,8.20e-41,168;CL:0002031,9.75e-41,120;CL:0002032,4.38e-38,161;CL:0000837,4.38e-38,161;CL:0000988,5.25e-38,177;CL:0000134,2.20e-16,354;CL:0002320,9.00e-16,361;CL:0000034,1.92e-14,441;CL:0000219,2.19e-14,386;CL:0000048,6.98e-14,427;CL:0000723,1.80e-13,433;CL:0000767,5.54e-09,3;CL:0000226,4.55e-08,3;CL:0000842,4.55e-08,3;CL:0002393,1.42e-07,9;CL:0002397,1.42e-07,9|ontology_enrichment_development_v019=CL:0002057;6.65e-63;42!CL:0000049;1.40e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.60e-17!80;UBERON:0002193!4.37e-17!112;UBERON:0002405!4.77e-17!115;UBERON:0001474!5.12e-16!86;UBERON:0002390!9.32e-16!102;UBERON:0003061!9.32e-16!102;UBERON:0004765!1.69e-12!101;UBERON:0001434!1.69e-12!101;UBERON:0002204!1.51e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.71e-56,76;UBERON:0002390,1.26e-52,98;UBERON:0003061,1.26e-52,98;UBERON:0001474,2.39e-51,82;UBERON:0002193,1.35e-46,108;UBERON:0002405,2.52e-46,93;UBERON:0004765,9.03e-46,90;UBERON:0001434,4.78e-40,100;UBERON:0003081,6.51e-26,203;UBERON:0002204,2.12e-24,167;UBERON:0002384,6.13e-15,371;UBERON:0000926,1.23e-12,315;UBERON:0004120,1.23e-12,315;UBERON:0006603,1.23e-12,315|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.492484232307152,0.204000691244253,0,0,0.684372125364421,0.251085279189606,0.152826811495903,0.246301768349837,0.236132343941038,4.32700704533794,2.68680578668049,1.70297735647684,0.919421224478927,0,0,0.232401601740905,0.853015394924529,0.587200878669695,3.87796785972314,5.61524452916397,12.5866305015194,0,0,0,1.89017710413434,2.26725566213286,1.69808842831471,3.95129362739664,4.11167888021826,4.33588919253145,3.45230870786581,5.63553554364021,2.12834006899727,2.75796544589295,5.80936215225443,2.70852973188684,1.88242339542605,2.72906150057846,1.79778787556068,4.59125838556354,3.53021929783703,2.55734850319616,2.30895910130701,3.78980949481101,2.13112375266347,7.54544020434318,13.0498601678962,4.9825779919646,2.00998932205395,4.17186334736161,2.82345498116652,5.44859552370032,11.7848843516021,6.96217252369946,1.05627643155971,1.91343869968539,0.838634582033504,3.03287304095537,1.20141514273205,1.76798145366788,0.285012743741249,0.39783335439818,0.547992461293902,0,0,0,1.70692089026603,1.20118796110804,0.574752439954483,0.661044872784862,0,1.1384259382189,0,0.382273228125229,2.64342657158052,1.12101712596307,0.526768169550154,0,0,0.411202997999018,0.334372990781356,0,0,0,0.111410456885174,0.294605907474837,0,0,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.903450714466637,0.383959833463255,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0,0.351339142772504,0.196468613246569,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0.39752481473341,0,0,0,0,0.550236083880135,0.626984899610432,0.258416759169329,0.35576626268671,0.33472061276467,0.805658634218294,0,0.488124115096339,0.735326160691737,0,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0.183201743930407,2.63560834872127,0,0.436094052142534,0,0,0.264818361626438,0.286836620748814,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8836 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4248 | |||
|TSSclassifier=W | |||
|UniProt=Q92820 | |||
|association_with_transcript=-257bp_to_ENST00000260118_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_GGH_5end | |||
|id=chr8:63951987..63952009,- | |||
|ontology_enrichment_celltype=CL:0002057!9.81e-30!42;CL:0000860!6.31e-28!45;CL:0000766!6.61e-22!76;CL:0000839!2.98e-20!70;CL:0000557!3.08e-20!71;CL:0000763!1.76e-19!112;CL:0000049!1.76e-19!112;CL:0002194!4.05e-17!63;CL:0000576!4.05e-17!63;CL:0000040!4.05e-17!63;CL:0000559!4.05e-17!63;CL:0002009!5.02e-17!65;CL:0000988!5.02e-17!182;CL:0000037!6.18e-17!172;CL:0000566!6.18e-17!172;CL:0002032!2.46e-16!165;CL:0000837!2.46e-16!165;CL:0000738!6.90e-16!140;CL:0002031!1.54e-14!124;CL:0002087!1.39e-13!119;CL:0000034!5.13e-08!444;CL:0000048!2.05e-07!430;CL:0000012!2.68e-07!682;CL:0000723!3.47e-07!436;CL:0000144!7.70e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.14e-77;33!CL:0002057;2.14e-77;33!CL:0000473;2.26e-53;39!CL:0000234;2.26e-53;39!CL:0000576;4.16e-47;48!CL:0000766;6.89e-33;69!CL:0000763;4.85e-17;100!CL:0002087;1.31e-15;104!CL:0000738;1.13e-11;136!CL:0002393;1.44e-11;6!CL:0002397;1.44e-11;6!CL:0000767;7.32e-09;3!CL:0000226;2.54e-08;3!CL:0000842;2.54e-08;3!CL:0000988;9.62e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.05e-88,42;CL:0002057,4.05e-88,42;CL:0000473,1.04e-75,48;CL:0000234,1.04e-75,48;CL:0000766,6.67e-67,72;CL:0000557,2.35e-65,67;CL:0000839,2.92e-60,66;CL:0002009,3.28e-59,61;CL:0002194,2.41e-58,59;CL:0000576,2.41e-58,59;CL:0000040,2.41e-58,59;CL:0000559,2.41e-58,59;CL:0000763,5.49e-49,108;CL:0000049,5.49e-49,108;CL:0000738,9.30e-48,136;CL:0002087,7.90e-41,115;CL:0000037,8.20e-41,168;CL:0002031,9.75e-41,120;CL:0002032,4.38e-38,161;CL:0000837,4.38e-38,161;CL:0000988,5.25e-38,177;CL:0000134,2.20e-16,354;CL:0002320,9.00e-16,361;CL:0000034,1.92e-14,441;CL:0000219,2.19e-14,386;CL:0000048,6.98e-14,427;CL:0000723,1.80e-13,433;CL:0000767,5.54e-09,3;CL:0000226,4.55e-08,3;CL:0000842,4.55e-08,3;CL:0002393,1.42e-07,9;CL:0002397,1.42e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.65e-63;42!CL:0000049;1.40e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.60e-17!80;UBERON:0002193!4.37e-17!112;UBERON:0002405!4.77e-17!115;UBERON:0001474!5.12e-16!86;UBERON:0002390!9.32e-16!102;UBERON:0003061!9.32e-16!102;UBERON:0004765!1.69e-12!101;UBERON:0001434!1.69e-12!101;UBERON:0002204!1.51e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.71e-56,76;UBERON:0002390,1.26e-52,98;UBERON:0003061,1.26e-52,98;UBERON:0001474,2.39e-51,82;UBERON:0002193,1.35e-46,108;UBERON:0002405,2.52e-46,93;UBERON:0004765,9.03e-46,90;UBERON:0001434,4.78e-40,100;UBERON:0003081,6.51e-26,203;UBERON:0002204,2.12e-24,167;UBERON:0002384,6.13e-15,371;UBERON:0000926,1.23e-12,315;UBERON:0004120,1.23e-12,315;UBERON:0006603,1.23e-12,315 | |||
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| |||
|short_description=p3@GGH | |||
}} |
Revision as of 05:46, 14 September 2013
Short description: | p3@GGH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GGH_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -257bp_to_ENST00000260118_5end |
EntrezGene: | GGH |
HGNC: | 4248 |
UniProt: | Q92820 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.71e-56 | 76 |
hematopoietic system | 1.26e-52 | 98 |
blood island | 1.26e-52 | 98 |
bone element | 2.39e-51 | 82 |
hemolymphoid system | 1.35e-46 | 108 |
immune system | 2.52e-46 | 93 |
skeletal element | 9.03e-46 | 90 |
skeletal system | 4.78e-40 | 100 |
lateral plate mesoderm | 6.51e-26 | 203 |
musculoskeletal system | 2.12e-24 | 167 |
connective tissue | 6.13e-15 | 371 |
mesoderm | 1.23e-12 | 315 |
mesoderm-derived structure | 1.23e-12 | 315 |
presumptive mesoderm | 1.23e-12 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.