FFCP PHASE1:Hg19::chr8:93115508..93115552,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=862|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1535|TSSclassifier=S|UniProt=E5RH72|association_with_transcript=0bp_to_ENST00000518832_5end|description=CAGE_peak_6_at_RUNX1T1_5end|id=chr8:93115508..93115552,-|ontology_enrichment_celltype=CL:0000057!8.14e-09!75;CL:0002620!7.46e-08!23|ontology_enrichment_celltype_v019=CL:0002620;2.65e-10;23|ontology_enrichment_celltype_v019_2=CL:0002620,3.26e-10,23|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.46e-25!115;UBERON:0001049!1.32e-17!57;UBERON:0005068!1.32e-17!57;UBERON:0006241!1.32e-17!57;UBERON:0007135!1.32e-17!57;UBERON:0000955!1.47e-16!69;UBERON:0006238!1.47e-16!69;UBERON:0002616!1.49e-16!59;UBERON:0001017!2.34e-16!82;UBERON:0005743!1.39e-15!86;UBERON:0000073!2.07e-15!94;UBERON:0001016!2.07e-15!94;UBERON:0003075!4.34e-14!86;UBERON:0007284!4.34e-14!86;UBERON:0001893!5.08e-14!34;UBERON:0002020!6.30e-14!34;UBERON:0003528!6.30e-14!34;UBERON:0003080!6.70e-14!42;UBERON:0002791!1.45e-13!33;UBERON:0002780!1.47e-13!41;UBERON:0001890!1.47e-13!41;UBERON:0006240!1.47e-13!41;UBERON:0001869!1.93e-13!32;UBERON:0000956!9.89e-13!25;UBERON:0000203!9.89e-13!25;UBERON:0002346!1.46e-12!90;UBERON:0002619!2.59e-12!22;UBERON:0000153!1.57e-11!129;UBERON:0007811!1.57e-11!129;UBERON:0000033!2.26e-11!123;UBERON:0001950!2.33e-11!20;UBERON:0004121!4.01e-11!169;UBERON:0000924!2.97e-10!173;UBERON:0006601!2.97e-10!173;UBERON:0000475!5.90e-10!365;UBERON:0003056!1.45e-09!61;UBERON:0000468!1.86e-09!659;UBERON:0000477!9.86e-08!286;UBERON:0004111!1.31e-07!241|ontology_enrichment_uberon_v019=UBERON:0002619;2.32e-08;22!UBERON:0000922;6.26e-08;49!UBERON:0001950;6.33e-08;20!UBERON:0000956;4.55e-07;25!UBERON:0000203;4.55e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.77e-14,114;UBERON:0001049,1.59e-08,56;UBERON:0005068,1.59e-08,56;UBERON:0006241,1.59e-08,56;UBERON:0007135,1.59e-08,56;UBERON:0002097,2.44e-08,41;UBERON:0002619,2.81e-08,22;UBERON:0000073,3.57e-08,53;UBERON:0002616,3.57e-08,53;UBERON:0001950,7.52e-08,20;UBERON:0000956,5.35e-07,25;UBERON:0000203,5.35e-07,25;UBERON:0002199,5.76e-07,46;UBERON:0002416,5.76e-07,46;UBERON:0001016,6.23e-07,89;UBERON:0003075,8.17e-07,82;UBERON:0007284,8.17e-07,82;UBERON:0002791,8.32e-07,32;UBERON:0001869,8.32e-07,32;UBERON:0000955,9.90e-07,68;UBERON:0006238,9.90e-07,68|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,1.0007329835313,1.34088328328186,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.61560529038394,0,0.940364164434263,0.286235987131057,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,1.5905718941022,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0.79504962946682,0,0.694281003215189,1.13061588384802,0.838998872419812,0.275118041940067,0,0.775250277507987,1.06729878806013,0.66944122552934,0,0,0.488124115096339,0.735326160691737,0.81014194788176,2.05389375053383,2.2452937262617,1.57656072676651,1.53316637465883,0,0.549605231791222,0,0,0,0.496971951695318,0,0.264818361626438,1.43418310374407,0.709336764396714,0.560677600142307,0,0.24666754841716,1.55605517699883,0.134710672069688,0,0.454072282934794,0,2.34321431833797,0,0,0,0.469737994575059,0.971237666208789,0,0.408308342509787,0.737005903870608,1.03325781175765,1.18800285728205,0.989067717114227,0,0,1.17835279767846,0.625592599359821,0,1.31693286264251,0.612975591598039,0.901428353439581,0,2.15267562826634,2.56268866582281,1.48352330811693,2.70081986475962,0.92747276314595,3.60696756063881,1.48893485065272,2.02531598689519,0.487185025805993,3.28163906517349,2.30124746605748,0.484938170456436,3.19508633264953,1.20902517873168,1.52604533079439,0,0,0,1.34171076742555,0.397589304964456,1.16193942869518,0.621966330092223,0.504641701751257,1.09493207722749,1.56449532329816,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0.977424915930974,0,0,0,0.234817388471643,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.258543431515556,7.15312891703765,0,0.26593811658487,0,0.257207374262142,0,0,0.428933980974443,0,0.823240336780769,0.325736184293735,0,1.58390374586686,0,0.871533458600294,0.299918973546171,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,0,0,0.415941723061614,0.713715955188647,0.630809660135739,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0,0.347534457872331,0.783204629850962,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.767309866440312,0,0.640695746278505,1.02341449813341,0.4825617634308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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |||
|TSSclassifier=S | |||
|UniProt=E5RH72 | |||
|association_with_transcript=0bp_to_ENST00000518832_5end | |||
|description=CAGE_peak_6_at_RUNX1T1_5end | |||
|id=chr8:93115508..93115552,- | |||
|ontology_enrichment_celltype=CL:0000057!8.14e-09!75;CL:0002620!7.46e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.65e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.26e-10,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-25!115;UBERON:0001049!1.32e-17!57;UBERON:0005068!1.32e-17!57;UBERON:0006241!1.32e-17!57;UBERON:0007135!1.32e-17!57;UBERON:0000955!1.47e-16!69;UBERON:0006238!1.47e-16!69;UBERON:0002616!1.49e-16!59;UBERON:0001017!2.34e-16!82;UBERON:0005743!1.39e-15!86;UBERON:0000073!2.07e-15!94;UBERON:0001016!2.07e-15!94;UBERON:0003075!4.34e-14!86;UBERON:0007284!4.34e-14!86;UBERON:0001893!5.08e-14!34;UBERON:0002020!6.30e-14!34;UBERON:0003528!6.30e-14!34;UBERON:0003080!6.70e-14!42;UBERON:0002791!1.45e-13!33;UBERON:0002780!1.47e-13!41;UBERON:0001890!1.47e-13!41;UBERON:0006240!1.47e-13!41;UBERON:0001869!1.93e-13!32;UBERON:0000956!9.89e-13!25;UBERON:0000203!9.89e-13!25;UBERON:0002346!1.46e-12!90;UBERON:0002619!2.59e-12!22;UBERON:0000153!1.57e-11!129;UBERON:0007811!1.57e-11!129;UBERON:0000033!2.26e-11!123;UBERON:0001950!2.33e-11!20;UBERON:0004121!4.01e-11!169;UBERON:0000924!2.97e-10!173;UBERON:0006601!2.97e-10!173;UBERON:0000475!5.90e-10!365;UBERON:0003056!1.45e-09!61;UBERON:0000468!1.86e-09!659;UBERON:0000477!9.86e-08!286;UBERON:0004111!1.31e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.32e-08;22!UBERON:0000922;6.26e-08;49!UBERON:0001950;6.33e-08;20!UBERON:0000956;4.55e-07;25!UBERON:0000203;4.55e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.77e-14,114;UBERON:0001049,1.59e-08,56;UBERON:0005068,1.59e-08,56;UBERON:0006241,1.59e-08,56;UBERON:0007135,1.59e-08,56;UBERON:0002097,2.44e-08,41;UBERON:0002619,2.81e-08,22;UBERON:0000073,3.57e-08,53;UBERON:0002616,3.57e-08,53;UBERON:0001950,7.52e-08,20;UBERON:0000956,5.35e-07,25;UBERON:0000203,5.35e-07,25;UBERON:0002199,5.76e-07,46;UBERON:0002416,5.76e-07,46;UBERON:0001016,6.23e-07,89;UBERON:0003075,8.17e-07,82;UBERON:0007284,8.17e-07,82;UBERON:0002791,8.32e-07,32;UBERON:0001869,8.32e-07,32;UBERON:0000955,9.90e-07,68;UBERON:0006238,9.90e-07,68 | |||
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| |||
|short_description=p6@RUNX1T1 | |||
}} |
Revision as of 06:22, 14 September 2013
Short description: | p6@RUNX1T1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RUNX1T1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000518832_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | E5RH72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.26e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.77e-14 | 114 |
neural tube | 1.59e-08 | 56 |
neural rod | 1.59e-08 | 56 |
future spinal cord | 1.59e-08 | 56 |
neural keel | 1.59e-08 | 56 |
skin of body | 2.44e-08 | 41 |
regional part of cerebral cortex | 2.81e-08 | 22 |
regional part of nervous system | 3.57e-08 | 53 |
regional part of brain | 3.57e-08 | 53 |
neocortex | 7.52e-08 | 20 |
cerebral cortex | 5.35e-07 | 25 |
pallium | 5.35e-07 | 25 |
integument | 5.76e-07 | 46 |
integumental system | 5.76e-07 | 46 |
nervous system | 6.23e-07 | 89 |
neural plate | 8.17e-07 | 82 |
presumptive neural plate | 8.17e-07 | 82 |
regional part of telencephalon | 8.32e-07 | 32 |
cerebral hemisphere | 8.32e-07 | 32 |
brain | 9.90e-07 | 68 |
future brain | 9.90e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.