FFCP PHASE1:Mm9::chrX:59540322..59540336,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74437|HGNC=|MCL_coexpression_id=2511|UniProt=Q9D4D2|association_with_transcript=5bp_to_ENSMUST00000051414,NM_001199996,uc009tik.1_5end|description=CAGE_peak_3_at_4933402E13Rik_5end|id=chrX:59540322..59540336,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!7.55e-36!14;UBERON:0003135!2.40e-33!15;UBERON:0003133!3.35e-33!24;UBERON:0000991!9.74e-33!18;UBERON:0005564!9.74e-33!18;UBERON:0003101!3.71e-31!16;UBERON:0000079!3.71e-31!16;UBERON:0005156!1.79e-30!26;UBERON:0000990!1.79e-30!26;UBERON:0004176!3.18e-29!17;UBERON:0009196!3.18e-29!17;UBERON:0009117!3.18e-29!17;UBERON:0002323!6.37e-15!37;UBERON:0004458!6.37e-15!37;UBERON:0003886!1.78e-14!38;UBERON:0005631!3.64e-14!3;UBERON:0000478!3.64e-14!3;UBERON:0000158!3.64e-14!3;UBERON:0002553!4.70e-14!39;UBERON:0000464!1.22e-10!57;UBERON:0001987!8.23e-10!2;UBERON:0003124!8.23e-10!2;UBERON:0004340!8.23e-10!2;UBERON:0000466!4.69e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.42e-25,14;UBERON:0003135,2.45e-23,15;UBERON:0003101,6.92e-22,16;UBERON:0000079,6.92e-22,16;UBERON:0004176,1.32e-20,17;UBERON:0009196,1.32e-20,17;UBERON:0009117,1.32e-20,17;UBERON:0003133,9.61e-20,24;UBERON:0000991,1.82e-19,18;UBERON:0005564,1.82e-19,18;UBERON:0005156,3.20e-18,26;UBERON:0000990,3.20e-18,26;UBERON:0005631,3.14e-14,3;UBERON:0000478,3.14e-14,3;UBERON:0000158,3.14e-14,3;UBERON:0000305,1.83e-11,1;UBERON:0002323,1.79e-09,37;UBERON:0004458,1.79e-09,37;UBERON:0003886,3.20e-09,38;UBERON:0002553,5.53e-09,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,31.6409558699999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,6.99045833850607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.45539408026285,0.299033092087958,0.165458490457098,0.194451188344048,0.904118764344118,0.168956125490778,1.29092962510329,5.33837977860195,18.4552446189251,13.5287107662563,6.91272015018877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@4933402E13Rik}} | ||
|EntrezGene=74437 | |||
|HGNC= | |||
|MCL_coexpression_id=2511 | |||
|UniProt=Q9D4D2 | |||
|association_with_transcript=5bp_to_ENSMUST00000051414,NM_001199996,uc009tik.1_5end | |||
|description=CAGE_peak_3_at_4933402E13Rik_5end | |||
|id=chrX:59540322..59540336,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!7.55e-36!14;UBERON:0003135!2.40e-33!15;UBERON:0003133!3.35e-33!24;UBERON:0000991!9.74e-33!18;UBERON:0005564!9.74e-33!18;UBERON:0003101!3.71e-31!16;UBERON:0000079!3.71e-31!16;UBERON:0005156!1.79e-30!26;UBERON:0000990!1.79e-30!26;UBERON:0004176!3.18e-29!17;UBERON:0009196!3.18e-29!17;UBERON:0009117!3.18e-29!17;UBERON:0002323!6.37e-15!37;UBERON:0004458!6.37e-15!37;UBERON:0003886!1.78e-14!38;UBERON:0005631!3.64e-14!3;UBERON:0000478!3.64e-14!3;UBERON:0000158!3.64e-14!3;UBERON:0002553!4.70e-14!39;UBERON:0000464!1.22e-10!57;UBERON:0001987!8.23e-10!2;UBERON:0003124!8.23e-10!2;UBERON:0004340!8.23e-10!2;UBERON:0000466!4.69e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.42e-25,14;UBERON:0003135,2.45e-23,15;UBERON:0003101,6.92e-22,16;UBERON:0000079,6.92e-22,16;UBERON:0004176,1.32e-20,17;UBERON:0009196,1.32e-20,17;UBERON:0009117,1.32e-20,17;UBERON:0003133,9.61e-20,24;UBERON:0000991,1.82e-19,18;UBERON:0005564,1.82e-19,18;UBERON:0005156,3.20e-18,26;UBERON:0000990,3.20e-18,26;UBERON:0005631,3.14e-14,3;UBERON:0000478,3.14e-14,3;UBERON:0000158,3.14e-14,3;UBERON:0000305,1.83e-11,1;UBERON:0002323,1.79e-09,37;UBERON:0004458,1.79e-09,37;UBERON:0003886,3.20e-09,38;UBERON:0002553,5.53e-09,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,31.6409558699999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,6.99045833850607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.45539408026285,0.299033092087958,0.165458490457098,0.194451188344048,0.904118764344118,0.168956125490778,1.29092962510329,5.33837977860195,18.4552446189251,13.5287107662563,6.91272015018877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@4933402E13Rik | |||
}} |
Revision as of 19:59, 14 September 2013
Short description: | p3@4933402E13Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_4933402E13Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2511 |
Association with transcript: | 5bp_to_ENSMUST00000051414, NM_001199996, uc009tik.1_5end |
EntrezGene: | 4933402E13Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 5.42e-25 | 14 |
male reproductive organ | 2.45e-23 | 15 |
male organism | 6.92e-22 | 16 |
male reproductive system | 6.92e-22 | 16 |
external genitalia | 1.32e-20 | 17 |
indifferent external genitalia | 1.32e-20 | 17 |
indifferent gonad | 1.32e-20 | 17 |
reproductive organ | 9.61e-20 | 24 |
gonad | 1.82e-19 | 18 |
gonad primordium | 1.82e-19 | 18 |
reproductive structure | 3.20e-18 | 26 |
reproductive system | 3.20e-18 | 26 |
extraembryonic membrane | 3.14e-14 | 3 |
extraembryonic structure | 3.14e-14 | 3 |
membranous layer | 3.14e-14 | 3 |
amnion | 1.83e-11 | 1 |
body cavity | 1.79e-09 | 37 |
body cavity or lining | 1.79e-09 | 37 |
body cavity precursor | 3.20e-09 | 38 |
anatomical cavity | 5.53e-09 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.