FFCP PHASE1:Hg19::chr1:77836954..77836994,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26289 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=365 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-68bp_to_ENST00000530826_5end | |||
|description=CAGE_peak_5_at_AK5_5end | |||
|id=chr1:77836954..77836994,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.29e-41!180;CL:0000057!1.83e-24!75;CL:0002371!3.81e-18!591;CL:0000144!1.96e-16!625;CL:0002620!2.14e-16!23;CL:0000548!2.75e-14!679;CL:0000004!2.75e-14!679;CL:0000255!2.75e-14!679;CL:0000048!4.11e-14!430;CL:0000012!6.40e-14!682;CL:0000680!9.58e-14!57;CL:0000056!9.58e-14!57;CL:0000355!9.58e-14!57;CL:0000723!1.21e-13!436;CL:0000183!1.64e-13!59;CL:0000034!1.41e-12!444;CL:0000187!1.21e-11!54;CL:0000003!1.70e-10!722;CL:0000192!3.15e-10!42;CL:0000514!3.15e-10!42;CL:0000393!2.37e-09!60;CL:0000211!2.37e-09!60;CL:0000359!2.19e-08!32;CL:0002334!2.22e-08!12;CL:0000222!3.84e-08!119;CL:0000220!3.11e-07!246;CL:0002321!5.34e-07!248;CL:0002539!8.92e-07!10;CL:0002556!9.76e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.05e-20;23!CL:0000057;1.26e-11;73!CL:0002539;1.02e-09;10!CL:0002556;1.42e-09;6!CL:0002334;3.40e-09;12!CL:0002320;9.91e-08;188!CL:0000056;1.16e-07;4!CL:0000062;3.26e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.67e-24,76;CL:0002620,7.36e-20,23;CL:0000048,1.71e-12,427;CL:0000723,5.94e-12,433;CL:0000034,2.93e-11,441;CL:0002539,5.09e-10,10;CL:0002556,1.17e-09,6;CL:0002334,3.59e-09,12;CL:0000680,6.81e-09,58;CL:0000056,6.81e-09,58;CL:0000355,6.81e-09,58;CL:0000219,3.02e-08,386;CL:0000515,1.08e-07,4;CL:0002320,2.09e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000515;1.16e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!7.01e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.12e-22!83;UBERON:0002329!5.12e-22!83;UBERON:0003077!5.12e-22!83;UBERON:0003059!5.12e-22!83;UBERON:0007282!5.12e-22!83;UBERON:0009618!5.12e-22!83;UBERON:0007285!5.12e-22!83;UBERON:0004290!3.42e-17!70;UBERON:0005256!1.32e-15!143;UBERON:0002097!1.37e-15!40;UBERON:0002199!1.40e-14!45;UBERON:0002416!1.40e-14!45;UBERON:0003102!8.47e-14!95;UBERON:0000486!4.69e-13!82;UBERON:0001134!5.43e-12!61;UBERON:0002036!5.43e-12!61;UBERON:0003082!5.43e-12!61;UBERON:0002385!3.28e-11!63;UBERON:0001015!3.28e-11!63;UBERON:0000383!3.28e-11!63;UBERON:0002100!8.11e-10!216;UBERON:0000475!7.31e-09!365;UBERON:0002067!5.63e-08!9;UBERON:0004016!5.63e-08!9;UBERON:0010083!5.63e-08!9;UBERON:0001135!3.57e-07!15;UBERON:0004237!8.92e-07!10;UBERON:0004695!8.92e-07!10;UBERON:0002111!8.92e-07!10;UBERON:0004178!8.92e-07!10;UBERON:0001758!9.76e-07!6;UBERON:0003672!9.76e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.77e-13;41!UBERON:0001434;3.33e-11;36!UBERON:0002385;8.23e-11;31!UBERON:0001015;8.23e-11;31!UBERON:0000383;8.23e-11;31!UBERON:0003102;8.05e-10;50!UBERON:0002199;9.43e-10;46!UBERON:0002416;9.43e-10;46!UBERON:0004237;1.02e-09;10!UBERON:0004695;1.02e-09;10!UBERON:0002111;1.02e-09;10!UBERON:0004178;1.02e-09;10!UBERON:0000075;1.31e-09;16!UBERON:0001758;1.42e-09;6!UBERON:0003672;1.42e-09;6!UBERON:0002204;2.70e-09;70!UBERON:0001135;2.91e-09;15!UBERON:0004765;4.35e-09;26!UBERON:0002067;2.96e-08;9!UBERON:0003129;4.69e-08;7!UBERON:0001474;1.88e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.35e-17,41;UBERON:0003102,3.72e-16,99;UBERON:0002199,1.00e-15,46;UBERON:0002416,1.00e-15,46;UBERON:0007524,9.13e-13,73;UBERON:0002329,1.73e-12,71;UBERON:0003059,1.73e-12,71;UBERON:0007282,1.73e-12,71;UBERON:0004290,1.73e-12,71;UBERON:0009618,1.73e-12,71;UBERON:0007503,1.86e-12,78;UBERON:0003077,3.44e-12,72;UBERON:0007285,3.44e-12,72;UBERON:0004237,5.09e-10,10;UBERON:0004695,5.09e-10,10;UBERON:0002111,5.09e-10,10;UBERON:0004178,5.09e-10,10;UBERON:0001758,1.17e-09,6;UBERON:0003672,1.17e-09,6;UBERON:0000075,1.21e-09,16;UBERON:0001135,1.57e-09,15;UBERON:0000486,2.01e-09,83;UBERON:0002067,3.07e-08,9;UBERON:0004016,3.07e-08,9;UBERON:0010083,3.07e-08,9;UBERON:0003129,3.99e-08,7;UBERON:0001134,6.57e-08,62;UBERON:0002036,6.57e-08,62;UBERON:0003082,6.57e-08,62;UBERON:0011137,1.23e-07,14;UBERON:0002385,1.81e-07,64;UBERON:0001015,1.81e-07,64;UBERON:0000383,1.81e-07,64;UBERON:0005256,2.11e-07,122;UBERON:0002384,4.70e-07,371 | |||
|phase1_expression=1.2717486548939,0.214100523890983,0.140954404095971,0,0,0,0,0,0,2.45733936501509,0,0,0,4.45558870656168,1.98838425436749,2.01697543935533,1.80808358407193,2.92124036154949,2.92759679274304,4.062994916534,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0.795285947051099,0,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,2.38336525463794,0,0.354668382198357,0.560677600142307,0,0,0,0,0.326923806226917,0.151357427644931,0,0.70296429550139,0.312160076830321,3.4228309292667,0.298897361103602,4.22764195117554,3.39933183173076,2.38766371393822,3.0623125688234,18.7936505487005,0.929932030581889,4.75201142912821,4.45080472701402,0,0,3.53505839303539,3.62843707628696,10.8055005038831,5.70670907145089,18.0827799521422,2.70428506031874,3.28953331164061,10.404598869954,2.34913127700424,0.635795703478686,11.4034616512073,2.78241828943785,7.72921620136887,7.44467425326359,13.33333024706,4.87185025805993,2.52433774244115,1.01254888506529,0,13.845374108148,18.8406423685687,3.22165125389926,0,0,0,0,0,0,0,0,0,7.8224766164908,22.513432836751,17.9575397758225,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,1.3032332212413,0,0,0.231860809950154,0,1.01056513432752,0.462985512576611,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,3.80987365753014,9.16772221339866,2.34434894420094,1.71072446022705,0.308482478109971,10.812350082381,1.71495859578347,2.13049060256185,0,3.0802080044799,0.646358578788889,0,1.690605505112,3.19125739901845,7.28052058379563,1.02882949704857,4.25547396069835,3.99633268524149,0,0,0,0.325736184293735,0,0,0.301439377059586,6.10073421020206,0,0,0,0,0.718874566474748,0,12.8373214536647,45.0269863736171,3.6985738059069,36.3493755376988,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.613457458595699,3.00102312635806,12.4781910901878,0.623912584592421,1.96271887676878,0.315404830067869,0.234282829985426,1.50473049863859,0,0,3.98535359121262,2.58116835958384,0.60818530127658,0.195801157462741,0.343143423810856,0,0,0,0,1.66435439510497,0.30239029332968,4.21783273291921,9.36118037057181,7.01650236082684,3.71603532841533,2.55853624533352,0.64341568457443,0,1.3878872442239,0.355123450626254,3.12083192852475,4.15403543346897,9.18061989833678,0,0.200506470303285,0,2.18147451512753,2.54927635209404,0.917870904715969,0.451199612907412,1.00119938235739,0,0,0.211103257785751,0,0.850468526382578,7.98888889577916,0,1.62567862526312,0.501689773854853,0.509752546090077,0.831076008928724,1.11937377361089,0,0,0.512900250232778,0,0,0,2.93022287418699,6.02319349420292,1.14853107599234,0,0,2.41676795730305,0.154048617114644,0,2.20538515975249,0.107420244868274,0.145016693914229,1.44885266607372,0.178064071293475,0,0,0,0,5.11330104227014,1.88887408098384,2.7881490806424,0,3.19383618190213,1.73986598415015,0.18532421910392,0.429374660225974,7.81532575655301,4.11293252134344,0,0.255897791311334,0,0,0,6.29553601541602,0.823611089208164,3.76999687506197,3.03273722359974,0,0.421258456238981,0,0,1.05650146756755,0.9554993798559,1.41405431953713,0,1.10273068709225,0.66343897524122,0.876901770507525,0,0,0,0.30982349809975,0.563391205064483,2.43799298746888,0,0.35667105148125,0.354761064070598,0,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,1.48171507906718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6164411019976,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,41.6793047466822,0.449341755736634,0,0,0,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13942055847001,0,0,0,0.31900115973192,3.57230614267263,0,0,0,0,0,0,0,0,0,2.10998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0.397429223405979,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,1.63197148218115,1.15580235960608,0,0.136905378891993,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,2.17199840701485,108.027686400158,9.79762080328227,0,0.082092520749339,0,0.79318464064088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,2.42638588066636,0,5.88164549245429,0,0,0.298509605773748,0.233713309847224,0,7.38671720572848,1.25783950876288,0.889811221596536,0.228840068396924,0.302461847526478,0,0.295710299979268,6.3718706865481,0.899606224327209,0.465788870628778,2.48823724704513,2.65841714557995,0.521745061811734,0.150257608997218,0.380805212168795,2.44122439922797,10.0016762561408,0.322231671127465,19.0253841550182,0.796191777397232,119.20827386962,8.92828833475262,5.051242331488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| |||
|short_description=p5@AK5 | |||
}} |
Revision as of 19:10, 10 January 2014
Short description: | p5@AK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AK5_5end |
Coexpression cluster: | NA |
Association with transcript: | -68bp_to_ENST00000530826_5end |
EntrezGene: | AK5 |
HGNC: | 365 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.67e-24 | 76 |
skin fibroblast | 7.36e-20 | 23 |
multi fate stem cell | 1.71e-12 | 427 |
somatic stem cell | 5.94e-12 | 433 |
stem cell | 2.93e-11 | 441 |
aortic smooth muscle cell | 5.09e-10 | 10 |
fibroblast of periodontium | 1.17e-09 | 6 |
preadipocyte | 3.59e-09 | 12 |
muscle precursor cell | 6.81e-09 | 58 |
myoblast | 6.81e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.81e-09 | 58 |
motile cell | 3.02e-08 | 386 |
skeletal muscle myoblast | 1.08e-07 | 4 |
connective tissue cell | 2.09e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.35e-17 | 41 |
surface structure | 3.72e-16 | 99 |
integument | 1.00e-15 | 46 |
integumental system | 1.00e-15 | 46 |
dense mesenchyme tissue | 9.13e-13 | 73 |
somite | 1.73e-12 | 71 |
presomitic mesoderm | 1.73e-12 | 71 |
presumptive segmental plate | 1.73e-12 | 71 |
dermomyotome | 1.73e-12 | 71 |
trunk paraxial mesoderm | 1.73e-12 | 71 |
epithelial vesicle | 1.86e-12 | 78 |
paraxial mesoderm | 3.44e-12 | 72 |
presumptive paraxial mesoderm | 3.44e-12 | 72 |
blood vessel smooth muscle | 5.09e-10 | 10 |
arterial system smooth muscle | 5.09e-10 | 10 |
artery smooth muscle tissue | 5.09e-10 | 10 |
aorta smooth muscle tissue | 5.09e-10 | 10 |
periodontium | 1.17e-09 | 6 |
dentition | 1.17e-09 | 6 |
subdivision of skeletal system | 1.21e-09 | 16 |
smooth muscle tissue | 1.57e-09 | 15 |
multilaminar epithelium | 2.01e-09 | 83 |
dermis | 3.07e-08 | 9 |
dermatome | 3.07e-08 | 9 |
future dermis | 3.07e-08 | 9 |
skull | 3.99e-08 | 7 |
skeletal muscle tissue | 6.57e-08 | 62 |
striated muscle tissue | 6.57e-08 | 62 |
myotome | 6.57e-08 | 62 |
axial skeletal system | 1.23e-07 | 14 |
muscle tissue | 1.81e-07 | 64 |
musculature | 1.81e-07 | 64 |
musculature of body | 1.81e-07 | 64 |
trunk mesenchyme | 2.11e-07 | 122 |
connective tissue | 4.70e-07 | 371 |