FFCP PHASE1:Hg19::chr1:161736140..161736151,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=791 | |||
|TSSclassifier=strong | |||
|UniProt=P18850,Q59H30 | |||
|association_with_transcript=56bp_to_ENST00000367942,uc001gbq.1,uc001gbr.2_5end | |||
|description=CAGE_peak_3_at_ATF6_5end | |||
|id=chr1:161736140..161736151,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.93e-31!76;CL:0000557!2.14e-27!71;CL:0002009!2.68e-27!65;CL:0002194!5.71e-26!63;CL:0000576!5.71e-26!63;CL:0000040!5.71e-26!63;CL:0000559!5.71e-26!63;CL:0000839!2.25e-25!70;CL:0000860!7.83e-22!45;CL:0002057!2.38e-21!42;CL:0000763!2.97e-21!112;CL:0000049!2.97e-21!112;CL:0000738!2.25e-14!140;CL:0002031!2.18e-11!124;CL:0002032!4.87e-11!165;CL:0000837!4.87e-11!165;CL:0000037!6.18e-11!172;CL:0000566!6.18e-11!172;CL:0002087!8.73e-11!119;CL:0000988!3.53e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.78e-19;33!CL:0002057;7.78e-19;33!CL:0000473;1.02e-18;39!CL:0000234;1.02e-18;39!CL:0000576;5.28e-15;48!CL:0000766;5.21e-13;69!CL:0000763;3.73e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.62e-31,72;CL:0000557,2.19e-27,67;CL:0002009,2.33e-27,61;CL:0002194,5.18e-26,59;CL:0000576,5.18e-26,59;CL:0000040,5.18e-26,59;CL:0000559,5.18e-26,59;CL:0000839,3.21e-25,66;CL:0000473,7.48e-25,48;CL:0000234,7.48e-25,48;CL:0000860,1.69e-21,42;CL:0002057,1.69e-21,42;CL:0000763,1.11e-20,108;CL:0000049,1.11e-20,108;CL:0000738,1.37e-13,136;CL:0002031,1.43e-10,120;CL:0002032,3.45e-10,161;CL:0000837,3.45e-10,161;CL:0000037,4.05e-10,168;CL:0002087,5.07e-10,115;CL:0000988,1.39e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.63e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.10e-24!112;UBERON:0002390!1.28e-23!102;UBERON:0003061!1.28e-23!102;UBERON:0002371!1.96e-23!80;UBERON:0001474!1.24e-21!86;UBERON:0002405!4.67e-21!115;UBERON:0004765!9.38e-18!101;UBERON:0001434!9.38e-18!101;UBERON:0003081!2.36e-11!216;UBERON:0002204!1.52e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.08e-24,108;UBERON:0002405,1.76e-24,93;UBERON:0002390,1.94e-23,98;UBERON:0003061,1.94e-23,98;UBERON:0002371,2.28e-23,76;UBERON:0001474,2.42e-21,82;UBERON:0004765,8.10e-18,90;UBERON:0001434,1.18e-15,100;UBERON:0003081,1.31e-13,203;UBERON:0002204,1.48e-08,167;UBERON:0000926,6.78e-08,315;UBERON:0004120,6.78e-08,315;UBERON:0006603,6.78e-08,315 | |||
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| |||
|short_description=p3@ATF6 | |||
}} |
Revision as of 21:56, 10 January 2014
Short description: | p3@ATF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_ENST00000367942, uc001gbq.1, uc001gbr.2_5end |
EntrezGene: | ATF6 |
HGNC: | 791 |
UniProt: | P18850Q59H30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.62e-31 | 72 |
granulocyte monocyte progenitor cell | 2.19e-27 | 67 |
macrophage dendritic cell progenitor | 2.33e-27 | 61 |
monopoietic cell | 5.18e-26 | 59 |
monocyte | 5.18e-26 | 59 |
monoblast | 5.18e-26 | 59 |
promonocyte | 5.18e-26 | 59 |
myeloid lineage restricted progenitor cell | 3.21e-25 | 66 |
defensive cell | 7.48e-25 | 48 |
phagocyte | 7.48e-25 | 48 |
classical monocyte | 1.69e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-21 | 42 |
myeloid cell | 1.11e-20 | 108 |
common myeloid progenitor | 1.11e-20 | 108 |
leukocyte | 1.37e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 1.43e-10 | 120 |
hematopoietic oligopotent progenitor cell | 3.45e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.45e-10 | 161 |
hematopoietic stem cell | 4.05e-10 | 168 |
nongranular leukocyte | 5.07e-10 | 115 |
hematopoietic cell | 1.39e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.08e-24 | 108 |
immune system | 1.76e-24 | 93 |
hematopoietic system | 1.94e-23 | 98 |
blood island | 1.94e-23 | 98 |
bone marrow | 2.28e-23 | 76 |
bone element | 2.42e-21 | 82 |
skeletal element | 8.10e-18 | 90 |
skeletal system | 1.18e-15 | 100 |
lateral plate mesoderm | 1.31e-13 | 203 |
musculoskeletal system | 1.48e-08 | 167 |
mesoderm | 6.78e-08 | 315 |
mesoderm-derived structure | 6.78e-08 | 315 |
presumptive mesoderm | 6.78e-08 | 315 |